RNA–Protein interactions for RNA: ENST00000547825.5

LIMA1-203, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-203ENST00000547825 OR2T27Q8NH04 317 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 FAM213BQ8TBF2 198 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 ELP5Q8TE02 316 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 CA5BP1Q8WTZ4 195 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 SMIM4Q8WVI0 70 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 SLC22A18Q96BI1 424 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 ARL5BQ96KC2 179 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 KLHL15Q96M94 604 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 ADOQ96SZ5 270 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 NXF5Q9H1B4 397 aaKnown RBP4.95□□□□□ -1.62
LIMA1-203ENST00000547825 FN3KRPQ9HA64 309 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 C12orf10Q9HB07 376 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 TESQ9UGI8 421 aaKnown RBP4.95□□□□□ -1.62
LIMA1-203ENST00000547825 ELF5Q9UKW6 265 aaPredicted RBP4.95□□□□□ -1.62
LIMA1-203ENST00000547825 TIMM8BQ9Y5J9 83 aaPredicted RBP4.95□□□□□ -1.62
LIMA1-203ENST00000547825 CSAG2Q9Y5P2 127 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 CACNA1GO43497 2377 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 LINC00862A6NCI5 91 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 SDCBPO00560 298 aaPredicted RBP4.95□□□□□ -1.62
LIMA1-203ENST00000547825 SYT7O43581 403 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 SRPX2O60687 465 aaPredicted RBP4.95□□□□□ -1.62
LIMA1-203ENST00000547825 ZNF354AO60765 605 aaPredicted RBP4.95□□□□□ -1.62
LIMA1-203ENST00000547825 NXPH3O95157 252 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 PET100P0DJ07 73 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 GP1BBP13224 206 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 CTRB1P17538 263 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 SPI1P17947 270 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 P2RX1P51575 399 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 FABP9Q0Z7S8 132 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 GPR18Q14330 331 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 RTP5Q14D33 572 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 HACD4Q5VWC8 232 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 RNLSQ5VYX0 342 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 CTRB2Q6GPI1 263 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 JMJD6Q6NYC1 403 aaPredicted RBP4.95□□□□□ -1.62
LIMA1-203ENST00000547825 C19orf48Q6RUI8 117 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 LCTLQ6UWM7 567 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 ZNF704Q6ZNC4 412 aaPredicted RBP4.95□□□□□ -1.62
LIMA1-203ENST00000547825 SLC16A9Q7RTY1 509 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 LINC00346Q8IVM7 164 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 CSNK1A1LQ8N752 337 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 NUDCD2Q8WVJ2 157 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 HPSE2Q8WWQ2 592 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 OVCA2Q8WZ82 227 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 CNRIP1Q96F85 164 aaPredicted RBP4.95□□□□□ -1.62
LIMA1-203ENST00000547825 DTD2Q96FN9 168 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 SENP5Q96HI0 755 aaPredicted RBP4.95□□□□□ -1.62
LIMA1-203ENST00000547825 SCGB3A2Q96PL1 93 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 SORCS2Q96PQ0 1159 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 NPAS1Q99742 590 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 MED18Q9BUE0 208 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 RAB11FIP5Q9BXF6 653 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 TINAGL1Q9GZM7 467 aaPredicted RBP4.95□□□□□ -1.62
LIMA1-203ENST00000547825 PITHD1Q9GZP4 211 aaPredicted RBP4.95□□□□□ -1.62
LIMA1-203ENST00000547825 SLC5A7Q9GZV3 580 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 SPACA1Q9HBV2 294 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 FGF20Q9NP95 211 aaPredicted RBP4.95□□□□□ -1.62
LIMA1-203ENST00000547825 SMCO4Q9NRQ5 59 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 SLC22A13Q9Y226 551 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 MMP24Q9Y5R2 645 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 SIRT4Q9Y6E7 314 aaPredicted RBP4.95□□□□□ -1.62
LIMA1-203ENST00000547825 TMEM269A0A1B0GVZ9 245 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 ZNF705FA8MVS1 300 aaPredicted RBP4.95□□□□□ -1.62
LIMA1-203ENST00000547825 STK17BO94768 372 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 NSA2O95478 260 aaKnown RBP4.95□□□□□ -1.62
LIMA1-203ENST00000547825 IL18BPO95998 194 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 IGLV1-40P01703 118 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 AMY1AP04745 511 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 ZNF705DP0CH99 300 aaPredicted RBP4.95□□□□□ -1.62
LIMA1-203ENST00000547825 ZNF705BP0CI00 300 aaPredicted RBP4.95□□□□□ -1.62
LIMA1-203ENST00000547825 CNR1P21554 472 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 MEOX2P50222 304 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 METAP1P53582 386 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 EMP2P54851 167 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 MRPS10P82664 201 aaKnown RBP4.95□□□□□ -1.62
LIMA1-203ENST00000547825 RASGEF1BQ0VAM2 473 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 ELAVL3Q14576 367 aaKnown RBP4.95□□□□□ -1.62
LIMA1-203ENST00000547825 ZNF273Q14593 569 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 GNMTQ14749 295 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 ALG11Q2TAA5 492 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 CR1LQ2VPA4 569 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 LAMTOR1Q6IAA8 161 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 SLC18B1Q6NT16 456 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 FIGLAQ6QHK4 219 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 SHISA6Q6ZSJ9 500 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 CDRT4Q8N9R6 151 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 PLA2G15Q8NCC3 412 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 OR5K2Q8NHB8 316 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 FRZBQ92765 325 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 FGF14Q92915 247 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 AKR1E2Q96JD6 320 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 SLC41A2Q96JW4 573 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 MRGPRX4Q96LA9 322 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 NUDT22Q9BRQ3 303 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 C1orf43Q9BWL3 253 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 OR52A5Q9H2C5 316 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 PRO1933Q9H354 126 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 TAS2R5Q9NYW4 299 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 GDE1Q9NZC3 331 aa4.95□□□□□ -1.62
LIMA1-203ENST00000547825 KIF25Q9UIL4 384 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms