RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 OR52H1Q8NGJ2 320 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 ASB5Q8WWX0 329 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 RAB40AQ8WXH6 277 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 HSD17B8Q92506 261 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 APH1AQ96BI3 265 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 ZNF845Q96IR2 970 aaPredicted RBP11.86□□□□□ -0.51
PTCH1-215ENST00000547672 FOXB1Q99853 325 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 PBOV1Q9GZY1 135 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 MIXL1Q9H2W2 232 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 BRD7Q9NPI1 651 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 G6PC2Q9NQR9 355 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 ABCB10Q9NRK6 738 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 FAM206AQ9NX38 181 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 ATPIF1Q9UII2 106 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 ZNF391Q9UJN7 358 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 SLC22A13Q9Y226 551 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 MSRB2Q9Y3D2 182 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 ALPK2Q86TB3 2170 aa11.86□□□□□ -0.51
PTCH1-215ENST00000547672 ZFHX2Q9C0A1 2572 aaPredicted RBP11.86□□□□□ -0.51
PTCH1-215ENST00000547672 SHISA3A0PJX4 238 aa11.85□□□□□ -0.51
PTCH1-215ENST00000547672 DCDC2BA2VCK2 349 aa11.85□□□□□ -0.51
PTCH1-215ENST00000547672 AHRRA9YTQ3 701 aa11.85□□□□□ -0.51
PTCH1-215ENST00000547672 PIN1P1O15428 100 aa11.85□□□□□ -0.51
PTCH1-215ENST00000547672 SYT7O43581 403 aa11.85□□□□□ -0.51
PTCH1-215ENST00000547672 MTRF1O75570 445 aaKnown RBP11.85□□□□□ -0.51
PTCH1-215ENST00000547672 PTTG1O95997 202 aa11.85□□□□□ -0.51
PTCH1-215ENST00000547672 PSKH1P11801 424 aa11.85□□□□□ -0.51
PTCH1-215ENST00000547672 PITPNBP48739 271 aa11.85□□□□□ -0.51
PTCH1-215ENST00000547672 INPP1P49441 399 aa11.85□□□□□ -0.51
PTCH1-215ENST00000547672 UCNP55089 124 aa11.85□□□□□ -0.51
PTCH1-215ENST00000547672 ENDOGQ14249 297 aaKnown RBP11.85□□□□□ -0.51
PTCH1-215ENST00000547672 SLC36A2Q495M3 483 aa11.85□□□□□ -0.51
PTCH1-215ENST00000547672 CEP78Q5JTW2 689 aa11.85□□□□□ -0.51
PTCH1-215ENST00000547672 CNIH2Q6PI25 160 aa11.85□□□□□ -0.51
PTCH1-215ENST00000547672 DRAM2Q6UX65 266 aa11.85□□□□□ -0.51
PTCH1-215ENST00000547672 CFAP77Q6ZQR2 320 aa11.85□□□□□ -0.51
PTCH1-215ENST00000547672 PGAP1Q75T13 922 aa11.85□□□□□ -0.51
PTCH1-215ENST00000547672 DOK3Q7L591 496 aa11.85□□□□□ -0.51
PTCH1-215ENST00000547672 SLC22A24Q8N4F4 322 aa11.85□□□□□ -0.51
PTCH1-215ENST00000547672 SAMD12Q8N8I0 201 aa11.85□□□□□ -0.51
PTCH1-215ENST00000547672 C19orf18Q8NEA5 215 aa11.85□□□□□ -0.51
PTCH1-215ENST00000547672 TRMT10AQ8TBZ6 339 aaKnown RBP11.85□□□□□ -0.51
PTCH1-215ENST00000547672 ABHD3Q8WU67 409 aa11.85□□□□□ -0.51
PTCH1-215ENST00000547672 RGP1Q92546 391 aaPredicted RBP11.85□□□□□ -0.51
PTCH1-215ENST00000547672 NABP1Q96AH0 204 aa11.85□□□□□ -0.51
PTCH1-215ENST00000547672 C10orf35Q96D05 121 aa11.85□□□□□ -0.51
PTCH1-215ENST00000547672 S100A16Q96FQ6 103 aaKnown RBP11.85□□□□□ -0.51
PTCH1-215ENST00000547672 SOSTQ9BQB4 213 aa11.85□□□□□ -0.51
PTCH1-215ENST00000547672 PRDM14Q9GZV8 571 aa11.85□□□□□ -0.51
PTCH1-215ENST00000547672 PLEK2Q9NYT0 353 aa11.85□□□□□ -0.51
PTCH1-215ENST00000547672 DKK4Q9UBT3 224 aa11.85□□□□□ -0.51
PTCH1-215ENST00000547672 AK6Q9Y3D8 172 aaKnown RBP11.85□□□□□ -0.51
PTCH1-215ENST00000547672 NCKAP5O14513 1909 aa11.85□□□□□ -0.51
PTCH1-215ENST00000547672 RIF1Q5UIP0 2472 aaKnown RBP11.85□□□□□ -0.51
PTCH1-215ENST00000547672 CNTRLQ7Z7A1 2325 aa11.85□□□□□ -0.51
PTCH1-215ENST00000547672 A0A0G2JK05 382 aa11.84□□□□□ -0.51
PTCH1-215ENST00000547672 A0A0U1RQV5 110 aa11.84□□□□□ -0.51
PTCH1-215ENST00000547672 LOC107986453A0A1B0GWG9 222 aa11.84□□□□□ -0.51
PTCH1-215ENST00000547672 OR6C6A6NF89 314 aa11.84□□□□□ -0.51
PTCH1-215ENST00000547672 RER1O15258 196 aa11.84□□□□□ -0.51
PTCH1-215ENST00000547672 TBX1O43435 398 aa11.84□□□□□ -0.51
PTCH1-215ENST00000547672 SGCEO43556 437 aa11.84□□□□□ -0.51
PTCH1-215ENST00000547672 SULT1B1O43704 296 aa11.84□□□□□ -0.51
PTCH1-215ENST00000547672 OCMP0CE72 109 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-215ENST00000547672 ZNF20P17024 532 aa11.84□□□□□ -0.51
PTCH1-215ENST00000547672 CX3CR1P49238 355 aa11.84□□□□□ -0.51
PTCH1-215ENST00000547672 MFGE8Q08431 387 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-215ENST00000547672 SRSF6Q13247 344 aaKnown RBP11.84□□□□□ -0.51
PTCH1-215ENST00000547672 IL18Q14116 193 aa11.84□□□□□ -0.51
PTCH1-215ENST00000547672 FAM189A2Q15884 450 aa11.84□□□□□ -0.51
PTCH1-215ENST00000547672 CEACAM16Q2WEN9 425 aa11.84□□□□□ -0.51
PTCH1-215ENST00000547672 UBE2NLQ5JXB2 153 aa11.84□□□□□ -0.51
PTCH1-215ENST00000547672 PHYHD1Q5SRE7 291 aa11.84□□□□□ -0.51
PTCH1-215ENST00000547672 OR2A2Q6IF42 318 aa11.84□□□□□ -0.51
PTCH1-215ENST00000547672 PYHIN1Q6K0P9 492 aa11.84□□□□□ -0.51
PTCH1-215ENST00000547672 Q6ZNX1 250 aa11.84□□□□□ -0.51
PTCH1-215ENST00000547672 ZNF627Q7L945 461 aa11.84□□□□□ -0.51
PTCH1-215ENST00000547672 SLC16A14Q7RTX9 510 aa11.84□□□□□ -0.51
PTCH1-215ENST00000547672 LYSMD2Q8IV50 215 aa11.84□□□□□ -0.51
PTCH1-215ENST00000547672 CCDC36Q8IYA8 594 aa11.84□□□□□ -0.51
PTCH1-215ENST00000547672 FNDC9Q8TBE3 224 aa11.84□□□□□ -0.51
PTCH1-215ENST00000547672 SLC39A7Q92504 469 aa11.84□□□□□ -0.51
PTCH1-215ENST00000547672 ZNF775Q96BV0 537 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-215ENST00000547672 PGAM5Q96HS1 289 aa11.84□□□□□ -0.51
PTCH1-215ENST00000547672 GMPPAQ96IJ6 420 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-215ENST00000547672 SRRQ9GZT4 340 aa11.84□□□□□ -0.51
PTCH1-215ENST00000547672 OR10A2Q9H208 303 aa11.84□□□□□ -0.51
PTCH1-215ENST00000547672 CALHM2Q9HA72 323 aa11.84□□□□□ -0.51
PTCH1-215ENST00000547672 ZNF275Q9NSD4 429 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-215ENST00000547672 TBCCD1Q9NVR7 557 aa11.84□□□□□ -0.51
PTCH1-215ENST00000547672 STEAP1Q9UHE8 339 aa11.84□□□□□ -0.51
PTCH1-215ENST00000547672 KLK13Q9UKR3 277 aa11.84□□□□□ -0.51
PTCH1-215ENST00000547672 SSUH2Q9Y2M2 353 aa11.84□□□□□ -0.51
PTCH1-215ENST00000547672 V9GYH0 126 aa11.84□□□□□ -0.51
PTCH1-215ENST00000547672 CNOT1A5YKK6 2376 aaKnown RBP11.83□□□□□ -0.52
PTCH1-215ENST00000547672 FAM186AA6NE01 2351 aa11.83□□□□□ -0.52
PTCH1-215ENST00000547672 A0A1B0GTH9 108 aa11.83□□□□□ -0.52
PTCH1-215ENST00000547672 SMIM30A4D0T7 59 aa11.83□□□□□ -0.52
PTCH1-215ENST00000547672 MAGEB3O15480 346 aa11.83□□□□□ -0.52
PTCH1-215ENST00000547672 CNOT4O95628 575 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms