RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 FGF18O76093 207 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 KLF8O95600 359 aaPredicted RBP11.67□□□□□ -0.54
PTCH1-212ENST00000546744 CLDN1O95832 211 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 ATF1P18846 271 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 IL2RGP31785 369 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 SHEQ5VZ18 495 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 TMEM65Q6PI78 240 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 ESPNLQ6ZVH7 1005 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 GLCCI1Q86VQ1 547 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 CASD1Q96PB1 797 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 SDF2Q99470 211 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 SHARPINQ9H0F6 387 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 PLK3Q9H4B4 646 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 A0A087WV62 115 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 LRP3O75074 770 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 CTSAP10619 480 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 APEHP13798 732 aaKnown RBP11.67□□□□□ -0.54
PTCH1-212ENST00000546744 COX5AP20674 150 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 TMEM164Q5U3C3 297 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 YOD1Q5VVQ6 348 aaPredicted RBP11.67□□□□□ -0.54
PTCH1-212ENST00000546744 PLXDC2Q6UX71 529 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 TRILQ7L0X0 811 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 PARS2Q7L3T8 475 aaKnown RBP11.67□□□□□ -0.54
PTCH1-212ENST00000546744 RBM45Q8IUH3 476 aaKnown RBP11.67□□□□□ -0.54
PTCH1-212ENST00000546744 NUDCD2Q8WVJ2 157 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 SDSLQ96GA7 329 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 HINT2Q9BX68 163 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 SMG9Q9H0W8 520 aaKnown RBP11.67□□□□□ -0.54
PTCH1-212ENST00000546744 MMACHCQ9Y4U1 282 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 LOC107986453A0A1B0GWG9 222 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 OR5K3A6NET4 321 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 MPC2O95563 127 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 WNT1P04628 370 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 FABP4P15090 132 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 PXNP49023 591 aaPredicted RBP11.67□□□□□ -0.54
PTCH1-212ENST00000546744 LGALSLQ3ZCW2 172 aaPredicted RBP11.67□□□□□ -0.54
PTCH1-212ENST00000546744 PLCXD3Q63HM9 321 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 KIAA0895LQ68EN5 471 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 ZNF429Q86V71 674 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 TMEM25Q86YD3 366 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 MSRB3Q8IXL7 192 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 SECTM1Q8WVN6 248 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 RIMS4Q9H426 269 aaPredicted RBP11.67□□□□□ -0.54
PTCH1-212ENST00000546744 LAMP3Q9UQV4 416 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 HEPACAM2A8MVW5 462 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 NPIPB8E9PQR5 432 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 YY2O15391 372 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 CSNK1G2P78368 415 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 ZNF90Q03938 601 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 DHRS2Q13268 280 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 EXOSC7Q15024 291 aaKnown RBP11.67□□□□□ -0.54
PTCH1-212ENST00000546744 RAB35Q15286 201 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 TIGITQ495A1 244 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 OR52W1Q6IF63 320 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 TMPRSS11FQ6ZWK6 438 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 SLC16A11Q8NCK7 471 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 DIO2Q92813 273 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 GCDHQ92947 438 aaPredicted RBP11.67□□□□□ -0.54
PTCH1-212ENST00000546744 FAM210BQ96KR6 192 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 SIRT5Q9NXA8 310 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 TMEM184BQ9Y519 407 aaPredicted RBP11.67□□□□□ -0.54
PTCH1-212ENST00000546744 RBBP6Q7Z6E9 1792 aaKnown RBP11.66□□□□□ -0.54
PTCH1-212ENST00000546744 PQLC2LA1A4F0 135 aa11.66□□□□□ -0.54
PTCH1-212ENST00000546744 TGM5O43548 720 aa11.66□□□□□ -0.54
PTCH1-212ENST00000546744 GABREP78334 506 aa11.66□□□□□ -0.54
PTCH1-212ENST00000546744 IFITM3Q01628 133 aa11.66□□□□□ -0.54
PTCH1-212ENST00000546744 HHEXQ03014 270 aa11.66□□□□□ -0.54
PTCH1-212ENST00000546744 TESK1Q15569 626 aa11.66□□□□□ -0.54
PTCH1-212ENST00000546744 HAGHQ16775 308 aa11.66□□□□□ -0.54
PTCH1-212ENST00000546744 FAM57BQ71RH2 274 aa11.66□□□□□ -0.54
PTCH1-212ENST00000546744 TCTN2Q96GX1 697 aa11.66□□□□□ -0.54
PTCH1-212ENST00000546744 ZNF764Q96H86 408 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-212ENST00000546744 PTBP3O95758 552 aaKnown RBP11.66□□□□□ -0.54
PTCH1-212ENST00000546744 HNRNPA2B1P22626 353 aaKnown RBP11.66□□□□□ -0.54
PTCH1-212ENST00000546744 EEF1A1P68104 462 aaKnown RBP11.66□□□□□ -0.54
PTCH1-212ENST00000546744 HTRA3P83110 453 aa11.66□□□□□ -0.54
PTCH1-212ENST00000546744 EEF1A2Q05639 463 aaKnown RBP11.66□□□□□ -0.54
PTCH1-212ENST00000546744 SURF2Q15527 256 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-212ENST00000546744 PLA1AQ53H76 456 aa11.66□□□□□ -0.54
PTCH1-212ENST00000546744 TFAP2EQ6VUC0 442 aa11.66□□□□□ -0.54
PTCH1-212ENST00000546744 SLC16A13Q7RTY0 426 aa11.66□□□□□ -0.54
PTCH1-212ENST00000546744 ARIH2OSQ8N7S6 290 aa11.66□□□□□ -0.54
PTCH1-212ENST00000546744 KDF1Q8NAX2 398 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-212ENST00000546744 GJC3Q8NFK1 279 aa11.66□□□□□ -0.54
PTCH1-212ENST00000546744 ADOQ96SZ5 270 aa11.66□□□□□ -0.54
PTCH1-212ENST00000546744 APOOQ9BUR5 198 aa11.66□□□□□ -0.54
PTCH1-212ENST00000546744 CTDSP1Q9GZU7 261 aa11.66□□□□□ -0.54
PTCH1-212ENST00000546744 UCK1Q9HA47 277 aa11.66□□□□□ -0.54
PTCH1-212ENST00000546744 KCND3Q9UK17 655 aa11.66□□□□□ -0.54
PTCH1-212ENST00000546744 TMED3Q9Y3Q3 217 aa11.66□□□□□ -0.54
PTCH1-212ENST00000546744 P2RY10O00398 339 aa11.66□□□□□ -0.54
PTCH1-212ENST00000546744 MAN2B1O00754 1011 aa11.66□□□□□ -0.54
PTCH1-212ENST00000546744 PGA3P0DJD8 388 aa11.66□□□□□ -0.54
PTCH1-212ENST00000546744 CST5P28325 142 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-212ENST00000546744 MSX1P28360 303 aa11.66□□□□□ -0.54
PTCH1-212ENST00000546744 VEGFBP49765 207 aa11.66□□□□□ -0.54
PTCH1-212ENST00000546744 SLC25A1P53007 311 aa11.66□□□□□ -0.54
PTCH1-212ENST00000546744 PPP1CBP62140 327 aa11.66□□□□□ -0.54
PTCH1-212ENST00000546744 SLC25A35Q3KQZ1 300 aa11.66□□□□□ -0.54
PTCH1-212ENST00000546744 CYHR1Q6ZMK1 362 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms