RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 MEP1BQ16820 701 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 GSG1Q2KHT4 349 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 SLC36A2Q495M3 483 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 KLHL12Q53G59 568 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 BEX5Q5H9J7 111 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 LINC01590Q5TEZ4 76 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 LCN1P1Q5VSP4 162 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 FAM27BQ5VT28 67 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 OTPQ5XKR4 325 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 TMEM108Q6UXF1 575 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 IZUMO2Q6UXV1 221 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 SLC16A14Q7RTX9 510 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 MDP1Q86V88 176 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 CPOQ8IVL8 374 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 GID4Q8IVV7 300 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 SKA3Q8IX90 412 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 CCDC36Q8IYA8 594 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 LRRC18Q8N456 261 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 TCEANCQ8N8B7 351 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 ZNF555Q8NEP9 628 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 OR10H5Q8NGA6 315 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 OR8J1Q8NGP2 316 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 C11orf40Q8WZ69 217 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 IL4I1Q96RQ9 567 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 APOL4Q9BPW4 351 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 ZNF416Q9BWM5 594 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 OR51V1Q9H2C8 321 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 CCNB1IP1Q9NPC3 277 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 NGBQ9NPG2 151 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 FAM118AQ9NWS6 357 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 MRPL22Q9NWU5 206 aaKnown RBP5.5□□□□□ -1.53
PRKDC-211ENST00000546304 DNAJC27Q9NZQ0 273 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 CRNNQ9UBG3 495 aaPredicted RBP5.5□□□□□ -1.53
PRKDC-211ENST00000546304 PFDN2Q9UHV9 154 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 KCNG2Q9UJ96 466 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 FBXL3Q9UKT7 428 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 CREBBPQ92793 2442 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 MAST4O15021 2626 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 MAP1AP78559 2803 aaPredicted RBP5.5□□□□□ -1.53
PRKDC-211ENST00000546304 DSCAMO60469 2012 aa5.5□□□□□ -1.53
PRKDC-211ENST00000546304 TRBV23-1A0A0A0MS06 115 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 IGHV1-18A0A0C4DH31 117 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 LOC100130705A0A1B0GUX0 176 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 TVP23AA6NH52 213 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 C9orf118A6NHY6 69 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 A6NNC1 897 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 H0YJX3 145 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 M0R1B8 84 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 CASKO14936 926 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 TLX2O43763 284 aaPredicted RBP5.49□□□□□ -1.53
PRKDC-211ENST00000546304 DOK2O60496 412 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 GLCEO94923 617 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 GOSR1O95249 250 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 MPZL1O95297 269 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 CLIC3O95833 236 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 IGLV1-44P01699 117 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 TFP02787 698 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 MMP7P09237 267 aaPredicted RBP5.49□□□□□ -1.53
PRKDC-211ENST00000546304 SPARCP09486 303 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 CECR9P0C854 216 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 PATE4P0C8F1 98 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 PSKH1P11801 424 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 ZNF32P17041 273 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 PAX7P23759 505 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 FMO3P31513 532 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 ARR3P36575 388 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 VHLP40337 213 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 NAA10P41227 235 aaPredicted RBP5.49□□□□□ -1.53
PRKDC-211ENST00000546304 RPS27P42677 84 aaKnown RBP5.49□□□□□ -1.53
PRKDC-211ENST00000546304 ENTPD1P49961 510 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 CDH11P55287 796 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 PCBD1P61457 104 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 SNRPGP62308 76 aaKnown RBP5.49□□□□□ -1.53
PRKDC-211ENST00000546304 LSM6P62312 80 aaKnown RBP5.49□□□□□ -1.53
PRKDC-211ENST00000546304 ADAM8P78325 824 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 PIGFQ07326 219 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 BSPH1Q075Z2 132 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 SPOCK1Q08629 439 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 APOFQ13790 326 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 GGTLC2Q14390 218 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 C3orf36Q3SXR2 165 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 SLC35D3Q5M8T2 416 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 AADACL4Q5VUY2 407 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 ZNF691Q5VV52 312 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 FOXB2Q5VYV0 432 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 NXNL2Q5VZ03 156 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 TTC23Q5W5X9 447 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 HIST2H2BCQ6DN03 193 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 ADAM5Q6NVV9 412 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 TMEM53Q6P2H8 277 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 UGT2A3Q6UWM9 527 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 BCDIN3DQ7Z5W3 292 aaKnown RBP5.49□□□□□ -1.53
PRKDC-211ENST00000546304 MYPOPQ86VE0 399 aaPredicted RBP5.49□□□□□ -1.53
PRKDC-211ENST00000546304 ERI1Q8IV48 349 aaKnown RBP5.49□□□□□ -1.53
PRKDC-211ENST00000546304 ZNF584Q8IVC4 421 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 ENTHD1Q8IYW4 607 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 DHRSXQ8N5I4 330 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 SETD9Q8NE22 299 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 OR6N2Q8NGY6 317 aa5.49□□□□□ -1.53
PRKDC-211ENST00000546304 FGFBP3Q8TAT2 258 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms