RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 C2orf76Q3KRA6 126 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 ZCWPW2Q504Y3 356 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 CCDC73Q6ZRK6 1079 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 NELFCDQ8IXH7 590 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 DEFB106AQ8N104 65 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 FBXL13Q8NEE6 735 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 WFDC11Q8NEX6 87 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 OR6K2Q8NGY2 324 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 CXorf40AQ8TE69 158 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 NRGNQ92686 78 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 COX14Q96I36 57 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 ZNF641Q96N77 438 aaPredicted RBP2.3□□□□□ -2.04
SNHG1-224ENST00000545688 IP6K3Q96PC2 410 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 NPY6RQ99463 290 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 GAL3ST1Q99999 423 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 SLC30A2Q9BRI3 323 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 TRIM62Q9BVG3 475 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 SPATA16Q9BXB7 569 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 TM6SF2Q9BZW4 377 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 OR11A1Q9GZK7 315 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 POPDC2Q9HBU9 364 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 RAB20Q9NX57 234 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 MAD1L1Q9Y6D9 718 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.3□□□□□ -2.043e-19■■■■■ 78.9
SNHG1-224ENST00000545688 TGP01266 2768 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 HRNRQ86YZ3 2850 aaPredicted RBP2.29□□□□□ -2.04
SNHG1-224ENST00000545688 DOCK10Q96BY6 2186 aa2.29□□□□□ -2.04
SNHG1-224ENST00000545688 IGHV3OR16-13A0A075B7E8 117 aa2.29□□□□□ -2.04
SNHG1-224ENST00000545688 IGHV5-51A0A0C4DH38 117 aa2.29□□□□□ -2.04
SNHG1-224ENST00000545688 TLCD2A6NGC4 264 aa2.29□□□□□ -2.04
SNHG1-224ENST00000545688 ARHGAP42A6NI28 874 aa2.29□□□□□ -2.04
SNHG1-224ENST00000545688 OR5K4A6NMS3 321 aa2.29□□□□□ -2.04
SNHG1-224ENST00000545688 KIF2AO00139 706 aaPredicted RBP2.29□□□□□ -2.04
SNHG1-224ENST00000545688 CCL21O00585 134 aa2.29□□□□□ -2.04
SNHG1-224ENST00000545688 KDELR3O43731 214 aa2.29□□□□□ -2.04
SNHG1-224ENST00000545688 CTAG2O75638 210 aa2.29□□□□□ -2.04
SNHG1-224ENST00000545688 AHCYP23526 432 aa2.29□□□□□ -2.04
SNHG1-224ENST00000545688 CYLC1P35663 651 aaPredicted RBP2.29□□□□□ -2.04
SNHG1-224ENST00000545688 ACTR1BP42025 376 aa2.29□□□□□ -2.04
SNHG1-224ENST00000545688 ACTR1AP61163 376 aa2.29□□□□□ -2.04
SNHG1-224ENST00000545688 NUCB2P80303 420 aa2.29□□□□□ -2.04
SNHG1-224ENST00000545688 TGFBR3Q03167 851 aa2.29□□□□□ -2.04
SNHG1-224ENST00000545688 CUL1Q13616 776 aa2.29□□□□□ -2.04
SNHG1-224ENST00000545688 ATXN7L3Q14CW9 347 aaPredicted RBP2.29□□□□□ -2.04
SNHG1-224ENST00000545688 NCF4Q15080 339 aa2.29□□□□□ -2.04
SNHG1-224ENST00000545688 CYTH1Q15438 398 aa2.29□□□□□ -2.04
SNHG1-224ENST00000545688 ABCA11PQ4W5N1 156 aa2.29□□□□□ -2.04
SNHG1-224ENST00000545688 BRMS1LQ5PSV4 323 aa2.29□□□□□ -2.04
SNHG1-224ENST00000545688 FAHD2BQ6P2I3 314 aaPredicted RBP2.29□□□□□ -2.04
SNHG1-224ENST00000545688 SLC25A34Q6PIV7 304 aa2.29□□□□□ -2.04
SNHG1-224ENST00000545688 ZNF621Q6ZSS3 439 aa2.29□□□□□ -2.04
SNHG1-224ENST00000545688 ACOT7LQ6ZUV0 252 aa2.29□□□□□ -2.04
SNHG1-224ENST00000545688 CENPQQ7L2Z9 268 aaPredicted RBP2.29□□□□□ -2.04
SNHG1-224ENST00000545688 ANKRD37Q7Z713 158 aa2.29□□□□□ -2.04
SNHG1-224ENST00000545688 ZADH2Q8N4Q0 377 aa2.29□□□□□ -2.04
SNHG1-224ENST00000545688 BCORP1Q8N888 145 aa2.29□□□□□ -2.04
SNHG1-224ENST00000545688 FAM184AQ8NB25 1140 aa2.29□□□□□ -2.04
SNHG1-224ENST00000545688 NPBQ8NG41 125 aa2.29□□□□□ -2.04
SNHG1-224ENST00000545688 VMP1Q96GC9 406 aa2.29□□□□□ -2.04
SNHG1-224ENST00000545688 FAHD2AQ96GK7 314 aa2.29□□□□□ -2.04
SNHG1-224ENST00000545688 ZNF670Q9BS34 389 aa2.29□□□□□ -2.04
SNHG1-224ENST00000545688 ZYG11BQ9C0D3 744 aa2.29□□□□□ -2.04
SNHG1-224ENST00000545688 ILKAPQ9H0C8 392 aaPredicted RBP2.29□□□□□ -2.04
SNHG1-224ENST00000545688 DDIT4Q9NX09 232 aa2.29□□□□□ -2.04
SNHG1-224ENST00000545688 WARS2Q9UGM6 360 aaKnown RBP2.29□□□□□ -2.04
SNHG1-224ENST00000545688 ANAPC7Q9UJX3 599 aa2.29□□□□□ -2.04
SNHG1-224ENST00000545688 RNF6Q9Y252 685 aa2.29□□□□□ -2.04
SNHG1-224ENST00000545688 MEMO1Q9Y316 297 aa2.29□□□□□ -2.04
SNHG1-224ENST00000545688 PPIL1Q9Y3C6 166 aa2.29□□□□□ -2.04
SNHG1-224ENST00000545688 OARD1Q9Y530 152 aa2.29□□□□□ -2.04
SNHG1-224ENST00000545688 SNX10Q9Y5X0 201 aa2.29□□□□□ -2.04
SNHG1-224ENST00000545688 COLCA2A8K830 154 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 M0QYV0 167 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 PSMD11O00231 422 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 SLC19A2O60779 497 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 GNA14O95837 355 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 P04436 131 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 PNMA6AP0CW24 399 aaPredicted RBP2.28□□□□□ -2.04
SNHG1-224ENST00000545688 ICAM2P13598 275 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 DPP4P27487 766 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 CASP1P29466 404 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 OR1E1P30953 314 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 SPAM1P38567 509 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 CAPZBP47756 277 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 EFNB2P52799 333 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 BIDP55957 195 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 PPP1CAP62136 330 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 SELENOTP62341 195 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 RAD51Q06609 339 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 INAQ16352 499 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 C1orf100Q5SVJ3 147 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 CERS6Q6ZMG9 384 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 CATSPER1Q8NEC5 780 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 OR51S1Q8NGJ8 323 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 LILRB4Q8NHJ6 448 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 UBALD1Q8TB05 177 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 ZNF606Q8WXB4 792 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 PSMF1Q92530 271 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 FRZBQ92765 325 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 TIMD4Q96H15 378 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms