RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-231ENST00000544639 ZNF488Q96MN9 340 aa2.28□□□□□ -2.04
RAP1B-231ENST00000544639 COL21A1Q96P44 957 aa2.28□□□□□ -2.04
RAP1B-231ENST00000544639 C20orf24Q9BUV8 137 aa2.28□□□□□ -2.04
RAP1B-231ENST00000544639 ANKRD60Q9BZ19 345 aa2.28□□□□□ -2.04
RAP1B-231ENST00000544639 MARCOQ9UEW3 520 aaPredicted RBP2.28□□□□□ -2.04
RAP1B-231ENST00000544639 DNASE2O00115 360 aaPredicted RBP2.27□□□□□ -2.05
RAP1B-231ENST00000544639 LSM1O15116 133 aaKnown RBP2.27□□□□□ -2.05
RAP1B-231ENST00000544639 RRP8O43159 456 aaKnown RBP2.27□□□□□ -2.05
RAP1B-231ENST00000544639 HLA-DQA1P01909 254 aa2.27□□□□□ -2.05
RAP1B-231ENST00000544639 CTSLP07711 333 aa2.27□□□□□ -2.05
RAP1B-231ENST00000544639 ERGP11308 486 aa2.27□□□□□ -2.05
RAP1B-231ENST00000544639 ZNF14P17017 642 aaPredicted RBP2.27□□□□□ -2.05
RAP1B-231ENST00000544639 CELP19835 753 aa2.27□□□□□ -2.05
RAP1B-231ENST00000544639 U2AF2P26368 475 aaKnown RBP eCLIP2.27□□□□□ -2.05
RAP1B-231ENST00000544639 KIR3DL2P43630 455 aa2.27□□□□□ -2.05
RAP1B-231ENST00000544639 CXCL12P48061 93 aa2.27□□□□□ -2.05
RAP1B-231ENST00000544639 SLC11A1P49279 550 aa2.27□□□□□ -2.05
RAP1B-231ENST00000544639 SYNJ2BPP57105 145 aa2.27□□□□□ -2.05
RAP1B-231ENST00000544639 EIF3EP60228 445 aaKnown RBP2.27□□□□□ -2.05
RAP1B-231ENST00000544639 ALKBH6Q3KRA9 238 aa2.27□□□□□ -2.05
RAP1B-231ENST00000544639 CHRFAM7AQ494W8 412 aa2.27□□□□□ -2.05
RAP1B-231ENST00000544639 HSP90AB3PQ58FF7 597 aa2.27□□□□□ -2.05
RAP1B-231ENST00000544639 SLC25A34Q6PIV7 304 aa2.27□□□□□ -2.05
RAP1B-231ENST00000544639 SLC16A13Q7RTY0 426 aa2.27□□□□□ -2.05
RAP1B-231ENST00000544639 CMC1Q7Z7K0 106 aa2.27□□□□□ -2.05
RAP1B-231ENST00000544639 WDFY1Q8IWB7 410 aa2.27□□□□□ -2.05
RAP1B-231ENST00000544639 COX18Q8N8Q8 333 aa2.27□□□□□ -2.05
RAP1B-231ENST00000544639 CHST4Q8NCG5 386 aa2.27□□□□□ -2.05
RAP1B-231ENST00000544639 OR52P1PQ8NH57 321 aa2.27□□□□□ -2.05
RAP1B-231ENST00000544639 LINC01560Q8TB33 94 aa2.27□□□□□ -2.05
RAP1B-231ENST00000544639 LRRC29Q8WV35 223 aa2.27□□□□□ -2.05
RAP1B-231ENST00000544639 RNF157Q96PX1 679 aa2.27□□□□□ -2.05
RAP1B-231ENST00000544639 DOK1Q99704 481 aa2.27□□□□□ -2.05
RAP1B-231ENST00000544639 EDA2RQ9HAV5 297 aa2.27□□□□□ -2.05
RAP1B-231ENST00000544639 NEK6Q9HC98 313 aa2.27□□□□□ -2.05
RAP1B-231ENST00000544639 ZNF160Q9HCG1 818 aa2.27□□□□□ -2.05
RAP1B-231ENST00000544639 SLC17A4Q9Y2C5 497 aa2.27□□□□□ -2.05
RAP1B-231ENST00000544639 HYOU1Q9Y4L1 999 aa2.27□□□□□ -2.05
RAP1B-231ENST00000544639 NINLQ9Y2I6 1382 aa2.26□□□□□ -2.05
RAP1B-231ENST00000544639 A0A1B0GW55 424 aa2.26□□□□□ -2.05
RAP1B-231ENST00000544639 NCBP2LA6PVI3 153 aaKnown RBP2.26□□□□□ -2.05
RAP1B-231ENST00000544639 RPL36A-HNRNPH2H7BZ11 118 aa2.26□□□□□ -2.05
RAP1B-231ENST00000544639 H7C417 338 aa2.26□□□□□ -2.05
RAP1B-231ENST00000544639 RAD51CO43502 376 aa2.26□□□□□ -2.05
RAP1B-231ENST00000544639 ERLIN1O75477 346 aa2.26□□□□□ -2.05
RAP1B-231ENST00000544639 OR2F2O95006 317 aa2.26□□□□□ -2.05
RAP1B-231ENST00000544639 DCNP07585 359 aaKnown RBP2.26□□□□□ -2.05
RAP1B-231ENST00000544639 OR8U9P0C7N5 309 aa2.26□□□□□ -2.05
RAP1B-231ENST00000544639 DUX4L2P0CJ85 424 aa2.26□□□□□ -2.05
RAP1B-231ENST00000544639 DUX4L3P0CJ86 424 aa2.26□□□□□ -2.05
RAP1B-231ENST00000544639 DUX4L5P0CJ88 424 aa2.26□□□□□ -2.05
RAP1B-231ENST00000544639 DUX4L6P0CJ89 424 aa2.26□□□□□ -2.05
RAP1B-231ENST00000544639 DUX4L7P0CJ90 424 aa2.26□□□□□ -2.05
RAP1B-231ENST00000544639 CACNG7P62955 275 aa2.26□□□□□ -2.05
RAP1B-231ENST00000544639 LIPEQ05469 1076 aa2.26□□□□□ -2.05
RAP1B-231ENST00000544639 TRAM2Q15035 370 aa2.26□□□□□ -2.05
RAP1B-231ENST00000544639 METAP1DQ6UB28 335 aaPredicted RBP2.26□□□□□ -2.05
RAP1B-231ENST00000544639 NPSR1Q6W5P4 371 aa2.26□□□□□ -2.05
RAP1B-231ENST00000544639 SNX20Q7Z614 316 aa2.26□□□□□ -2.05
RAP1B-231ENST00000544639 SCD5Q86SK9 330 aa2.26□□□□□ -2.05
RAP1B-231ENST00000544639 OSR2Q8N2R0 312 aa2.26□□□□□ -2.05
RAP1B-231ENST00000544639 C11orf72Q8NBR9 251 aa2.26□□□□□ -2.05
RAP1B-231ENST00000544639 OR52E2Q8NGJ4 325 aa2.26□□□□□ -2.05
RAP1B-231ENST00000544639 LYPD6BQ8NI32 183 aa2.26□□□□□ -2.05
RAP1B-231ENST00000544639 CIRBP-AS1Q8TBR5 109 aa2.26□□□□□ -2.05
RAP1B-231ENST00000544639 DCPSQ96C86 337 aaKnown RBP2.26□□□□□ -2.05
RAP1B-231ENST00000544639 ECHDC3Q96DC8 303 aa2.26□□□□□ -2.05
RAP1B-231ENST00000544639 CHP1Q99653 195 aa2.26□□□□□ -2.05
RAP1B-231ENST00000544639 OSBPL11Q9BXB4 747 aa2.26□□□□□ -2.05
RAP1B-231ENST00000544639 TMEM185BQ9H7F4 350 aa2.26□□□□□ -2.05
RAP1B-231ENST00000544639 DUX4Q9UBX2 424 aa2.26□□□□□ -2.05
RAP1B-231ENST00000544639 MTFP1Q9UDX5 166 aa2.26□□□□□ -2.05
RAP1B-231ENST00000544639 RABL2BQ9UNT1 228 aa2.26□□□□□ -2.05
RAP1B-231ENST00000544639 S4R3C0 116 aa2.26□□□□□ -2.05
RAP1B-231ENST00000544639 COL27A1Q8IZC6 1860 aaPredicted RBP2.26□□□□□ -2.05
RAP1B-231ENST00000544639 BRWD3Q6RI45 1802 aa2.26□□□□□ -2.05
RAP1B-231ENST00000544639 PALLDQ8WX93 1383 aa2.25□□□□□ -2.05
RAP1B-231ENST00000544639 IGLV3-12A0A075B6K2 115 aa2.25□□□□□ -2.05
RAP1B-231ENST00000544639 CTAGE15A4D2H0 777 aa2.25□□□□□ -2.05
RAP1B-231ENST00000544639 ZNF850A8MQ14 1090 aa2.25□□□□□ -2.05
RAP1B-231ENST00000544639 H0YJW9 148 aa2.25□□□□□ -2.05
RAP1B-231ENST00000544639 REM1O75628 298 aa2.25□□□□□ -2.05
RAP1B-231ENST00000544639 FLOT1O75955 427 aa2.25□□□□□ -2.05
RAP1B-231ENST00000544639 AGTP01019 485 aa2.25□□□□□ -2.05
RAP1B-231ENST00000544639 IGLV3-19P01714 112 aa2.25□□□□□ -2.05
RAP1B-231ENST00000544639 CD74P04233 296 aa2.25□□□□□ -2.05
RAP1B-231ENST00000544639 ZNF806P0C7X5 589 aa2.25□□□□□ -2.05
RAP1B-231ENST00000544639 EIF2S2P20042 333 aaKnown RBP2.25□□□□□ -2.05
RAP1B-231ENST00000544639 OR1E1P30953 314 aa2.25□□□□□ -2.05
RAP1B-231ENST00000544639 CDKN2DP55273 166 aa2.25□□□□□ -2.05
RAP1B-231ENST00000544639 CCNA1P78396 465 aa2.25□□□□□ -2.05
RAP1B-231ENST00000544639 PITPNAQ00169 270 aa2.25□□□□□ -2.05
RAP1B-231ENST00000544639 BEX3Q00994 111 aa2.25□□□□□ -2.05
RAP1B-231ENST00000544639 KIR2DS1Q14954 304 aa2.25□□□□□ -2.05
RAP1B-231ENST00000544639 PSMD5Q16401 504 aa2.25□□□□□ -2.05
RAP1B-231ENST00000544639 HSDL1Q3SXM5 330 aa2.25□□□□□ -2.05
RAP1B-231ENST00000544639 TCEAL5Q5H9L2 206 aa2.25□□□□□ -2.05
RAP1B-231ENST00000544639 DNLZQ5SXM8 178 aa2.25□□□□□ -2.05
RAP1B-231ENST00000544639 ZFP1Q6P2D0 407 aa2.25□□□□□ -2.05
RAP1B-231ENST00000544639 TTC23LQ6PF05 361 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms