RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 C9orf16Q9BUW7 83 aa16.4■□□□□ 0.22
DDX55-211ENST00000544429 PRRG3Q9BZD7 231 aa16.4■□□□□ 0.22
DDX55-211ENST00000544429 OR51V1Q9H2C8 321 aa16.4■□□□□ 0.22
DDX55-211ENST00000544429 OR51B6Q9H340 312 aa16.4■□□□□ 0.22
DDX55-211ENST00000544429 ELOVL3Q9HB03 270 aa16.4■□□□□ 0.22
DDX55-211ENST00000544429 M0R129 80 aa16.39■□□□□ 0.21
DDX55-211ENST00000544429 ABHD16AO95870 558 aa16.39■□□□□ 0.21
DDX55-211ENST00000544429 CLPTM1O96005 669 aa16.39■□□□□ 0.21
DDX55-211ENST00000544429 IGHV3-13P01766 116 aa16.39■□□□□ 0.21
DDX55-211ENST00000544429 LCKP06239 509 aa16.39■□□□□ 0.21
DDX55-211ENST00000544429 TUBG1P23258 451 aa16.39■□□□□ 0.21
DDX55-211ENST00000544429 PPP1CBP62140 327 aa16.39■□□□□ 0.21
DDX55-211ENST00000544429 ARL9Q6T311 187 aa16.39■□□□□ 0.21
DDX55-211ENST00000544429 RHOUQ7L0Q8 258 aa16.39■□□□□ 0.21
DDX55-211ENST00000544429 DCXRQ7Z4W1 244 aa16.39■□□□□ 0.21
DDX55-211ENST00000544429 ABHD4Q8TB40 342 aa16.39■□□□□ 0.21
DDX55-211ENST00000544429 SYNPRQ8TBG9 265 aa16.39■□□□□ 0.21
DDX55-211ENST00000544429 TMEM163Q8TC26 289 aa16.39■□□□□ 0.21
DDX55-211ENST00000544429 ZMYND19Q96E35 227 aaPredicted RBP16.39■□□□□ 0.21
DDX55-211ENST00000544429 HRASLS5Q96KN8 279 aa16.39■□□□□ 0.21
DDX55-211ENST00000544429 SORCS2Q96PQ0 1159 aa16.39■□□□□ 0.21
DDX55-211ENST00000544429 INTS14Q96SY0 518 aa16.39■□□□□ 0.21
DDX55-211ENST00000544429 PITX2Q99697 317 aa16.39■□□□□ 0.21
DDX55-211ENST00000544429 SYT3Q9BQG1 590 aa16.39■□□□□ 0.21
DDX55-211ENST00000544429 BARX1Q9HBU1 254 aaPredicted RBP16.39■□□□□ 0.21
DDX55-211ENST00000544429 TUBG2Q9NRH3 451 aa16.39■□□□□ 0.21
DDX55-211ENST00000544429 FZR1Q9UM11 496 aa16.39■□□□□ 0.21
DDX55-211ENST00000544429 ACANP16112 2415 aa16.38■□□□□ 0.21
DDX55-211ENST00000544429 SPARCP09486 303 aa16.38■□□□□ 0.21
DDX55-211ENST00000544429 ACSM4P0C7M7 580 aa16.38■□□□□ 0.21
DDX55-211ENST00000544429 RGS6P49758 472 aa16.38■□□□□ 0.21
DDX55-211ENST00000544429 GGTLC2Q14390 218 aa16.38■□□□□ 0.21
DDX55-211ENST00000544429 DPY19L4Q7Z388 723 aa16.38■□□□□ 0.21
DDX55-211ENST00000544429 TCEANCQ8N8B7 351 aa16.38■□□□□ 0.21
DDX55-211ENST00000544429 SLC25A40Q8TBP6 338 aa16.38■□□□□ 0.21
DDX55-211ENST00000544429 KLF14Q8TD94 323 aaPredicted RBP16.38■□□□□ 0.21
DDX55-211ENST00000544429 OTULINQ96BN8 352 aa16.38■□□□□ 0.21
DDX55-211ENST00000544429 MBOAT4Q96T53 435 aa16.38■□□□□ 0.21
DDX55-211ENST00000544429 TEAD3Q99594 435 aa16.38■□□□□ 0.21
DDX55-211ENST00000544429 OR2J1Q9GZK6 312 aa16.38■□□□□ 0.21
DDX55-211ENST00000544429 POFUT1Q9H488 388 aa16.38■□□□□ 0.21
DDX55-211ENST00000544429 RIBC2Q9H4K1 309 aa16.38■□□□□ 0.21
DDX55-211ENST00000544429 TLX2O43763 284 aaPredicted RBP16.37■□□□□ 0.21
DDX55-211ENST00000544429 F12P00748 615 aaPredicted RBP16.37■□□□□ 0.21
DDX55-211ENST00000544429 MPV17P39210 176 aa16.37■□□□□ 0.21
DDX55-211ENST00000544429 EFNA4P52798 201 aa16.37■□□□□ 0.21
DDX55-211ENST00000544429 RAD23AP54725 363 aa16.37■□□□□ 0.21
DDX55-211ENST00000544429 KLF3P57682 345 aaPredicted RBP16.37■□□□□ 0.21
DDX55-211ENST00000544429 APOFQ13790 326 aa16.37■□□□□ 0.21
DDX55-211ENST00000544429 ZNF718Q3SXZ3 478 aa16.37■□□□□ 0.21
DDX55-211ENST00000544429 KLHL12Q53G59 568 aa16.37■□□□□ 0.21
DDX55-211ENST00000544429 NXNL2Q5VZ03 156 aa16.37■□□□□ 0.21
DDX55-211ENST00000544429 TMEM154Q6P9G4 183 aa16.37■□□□□ 0.21
DDX55-211ENST00000544429 ERI1Q8IV48 349 aaKnown RBP16.37■□□□□ 0.21
DDX55-211ENST00000544429 AMELYQ99218 206 aa16.37■□□□□ 0.21
DDX55-211ENST00000544429 ABHD6Q9BV23 337 aa16.37■□□□□ 0.21
DDX55-211ENST00000544429 TMUB1Q9BVT8 246 aa16.37■□□□□ 0.21
DDX55-211ENST00000544429 C1QTNF5Q9BXJ0 243 aa16.37■□□□□ 0.21
DDX55-211ENST00000544429 DLL4Q9NR61 685 aa16.37■□□□□ 0.21
DDX55-211ENST00000544429 STARD10Q9Y365 291 aa16.37■□□□□ 0.21
DDX55-211ENST00000544429 GRIP1Q9Y3R0 1128 aa16.37■□□□□ 0.21
DDX55-211ENST00000544429 M0R233 179 aa16.36■□□□□ 0.21
DDX55-211ENST00000544429 DLGAP1O14490 977 aa16.36■□□□□ 0.21
DDX55-211ENST00000544429 SELENOFO60613 162 aa16.36■□□□□ 0.21
DDX55-211ENST00000544429 BAG2O95816 211 aa16.36■□□□□ 0.21
DDX55-211ENST00000544429 ANPEPP15144 967 aa16.36■□□□□ 0.21
DDX55-211ENST00000544429 RCN1Q15293 331 aa16.36■□□□□ 0.21
DDX55-211ENST00000544429 SPATA46Q5T0L3 261 aa16.36■□□□□ 0.21
DDX55-211ENST00000544429 ZBTB49Q6ZSB9 765 aa16.36■□□□□ 0.21
DDX55-211ENST00000544429 SHFQ7M4L6 423 aa16.36■□□□□ 0.21
DDX55-211ENST00000544429 BCDIN3DQ7Z5W3 292 aaKnown RBP16.36■□□□□ 0.21
DDX55-211ENST00000544429 ZCCHC24Q8N2G6 241 aaKnown RBP16.36■□□□□ 0.21
DDX55-211ENST00000544429 OR8J1Q8NGP2 316 aa16.36■□□□□ 0.21
DDX55-211ENST00000544429 OR6N2Q8NGY6 317 aa16.36■□□□□ 0.21
DDX55-211ENST00000544429 OTOSQ8NHW6 89 aa16.36■□□□□ 0.21
DDX55-211ENST00000544429 RNF133Q8WVZ7 376 aa16.36■□□□□ 0.21
DDX55-211ENST00000544429 APOBEC3DQ96AK3 386 aaPredicted RBP16.36■□□□□ 0.21
DDX55-211ENST00000544429 SLAMF6Q96DU3 332 aa16.36■□□□□ 0.21
DDX55-211ENST00000544429 SLCO1C1Q9NYB5 712 aa16.36■□□□□ 0.21
DDX55-211ENST00000544429 DUSP13Q9UII6 198 aa16.36■□□□□ 0.21
DDX55-211ENST00000544429 ZNF878C9JN71 531 aa16.35■□□□□ 0.21
DDX55-211ENST00000544429 ADRA2AP08913 450 aa16.35■□□□□ 0.21
DDX55-211ENST00000544429 MMP15P51511 669 aa16.35■□□□□ 0.21
DDX55-211ENST00000544429 MAD2L1BPQ15013 274 aaPredicted RBP16.35■□□□□ 0.21
DDX55-211ENST00000544429 MEPCEQ7L2J0 689 aaKnown RBP16.35■□□□□ 0.21
DDX55-211ENST00000544429 NAA40Q86UY6 237 aa16.35■□□□□ 0.21
DDX55-211ENST00000544429 ZNF454Q8N9F8 522 aa16.35■□□□□ 0.21
DDX55-211ENST00000544429 TRUB1Q8WWH5 349 aaKnown RBP16.35■□□□□ 0.21
DDX55-211ENST00000544429 EME1Q96AY2 570 aa16.35■□□□□ 0.21
DDX55-211ENST00000544429 Q96MF0 132 aa16.35■□□□□ 0.21
DDX55-211ENST00000544429 COG8Q96MW5 612 aa16.35■□□□□ 0.21
DDX55-211ENST00000544429 IL4I1Q96RQ9 567 aa16.35■□□□□ 0.21
DDX55-211ENST00000544429 MS4A5Q9H3V2 200 aa16.35■□□□□ 0.21
DDX55-211ENST00000544429 TOR3AQ9H497 397 aa16.35■□□□□ 0.21
DDX55-211ENST00000544429 HAO2Q9NYQ3 351 aa16.35■□□□□ 0.21
DDX55-211ENST00000544429 ORC6Q9Y5N6 252 aa16.35■□□□□ 0.21
DDX55-211ENST00000544429 F5H5K5 113 aa16.34■□□□□ 0.21
DDX55-211ENST00000544429 M0R135 149 aa16.34■□□□□ 0.21
DDX55-211ENST00000544429 ALOX5APP20292 161 aa16.34■□□□□ 0.21
DDX55-211ENST00000544429 ANOS1P23352 680 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms