RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 MAP6Q96JE9 813 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 POM121L2Q96KW2 1035 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 LURAP1Q96LR2 239 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 ZNF75AQ96N20 296 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 DCLRE1CQ96SD1 692 aaKnown RBP5.46□□□□□ -1.54
LTBR-212ENST00000543542 TMEM204Q9BSN7 226 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 ABHD6Q9BV23 337 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 MROQ9BYG7 248 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 BCL2L14Q9BZR8 327 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 YIPF3Q9GZM5 350 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 LIME1Q9H400 295 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 PLK3Q9H4B4 646 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 PLEKHF2Q9H8W4 249 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 MARCH7Q9H992 704 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 BRD7Q9NPI1 651 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 CA10Q9NS85 328 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 PTTG3PQ9NZH4 202 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 ATPIF1Q9UII2 106 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 DUSP13Q9UII6 198 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 FZR1Q9UM11 496 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 GTF2A1LQ9UNN4 478 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 PLEKHA6Q9Y2H5 1048 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 RPL36Q9Y3U8 105 aaKnown RBP5.46□□□□□ -1.54
LTBR-212ENST00000543542 PMF1-BGLAPU3KQ54 211 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 LRRK2Q5S007 2527 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 ALPK2Q86TB3 2170 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 DCHS2Q6V1P9 2916 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 BAHCC1Q9P281 2608 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 A0A1W2PPR1 153 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 DAPL1A0PJW8 107 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 H0YJX3 145 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 M0R135 149 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 PSMD9O00233 223 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 DLGAP1O14490 977 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 GPRIN2O60269 458 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 SMPD2O60906 423 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 FAM20BO75063 409 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 ATE1O95260 518 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 MT-ND5P03915 603 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 KRT8P05787 483 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 SBK2P0C263 348 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 OR4A8P0C604 315 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 DBTP11182 482 aaKnown RBP5.45□□□□□ -1.54
LTBR-212ENST00000543542 PSKH1P11801 424 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 PCSK6P29122 969 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 TTKP33981 857 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 GLRXP35754 106 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 SERPINF1P36955 418 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 CX3CR1P49238 355 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 KLF3P57682 345 aaPredicted RBP5.45□□□□□ -1.54
LTBR-212ENST00000543542 CXCR4P61073 352 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 ERVS71-1P61550 626 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 PPP1CBP62140 327 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 SNRPD2P62316 118 aaKnown RBP5.45□□□□□ -1.54
LTBR-212ENST00000543542 ACTC1P68032 377 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 ACTA1P68133 377 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 HIST1H3AP68431 136 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 ADARB1P78563 741 aaKnown RBP5.45□□□□□ -1.54
LTBR-212ENST00000543542 EFNB1P98172 346 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 HGFACQ04756 655 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 GGTLC2Q14390 218 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 MAD2L1BPQ15013 274 aaPredicted RBP5.45□□□□□ -1.54
LTBR-212ENST00000543542 MOGQ16653 247 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 NKPD1Q17RQ9 610 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 GFOD2Q3B7J2 385 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 ALKBH6Q3KRA9 238 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 KLHL22Q53GT1 634 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 HIST2H3PS2Q5TEC6 136 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 PAMR1Q6UXH9 720 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 LRRN1Q6UXK5 716 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 HIST2H3AQ71DI3 136 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 FAM220AQ7Z4H9 259 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 CDH24Q86UP0 819 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 C1orf174Q8IYL3 243 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 YIPF7Q8N8F6 280 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 LILRB1Q8NHL6 650 aaPredicted RBP5.45□□□□□ -1.54
LTBR-212ENST00000543542 RHOXF1Q8NHV9 184 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 CNIH3Q8TBE1 160 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 SYNPRQ8TBG9 265 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 SLC25A40Q8TBP6 338 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 ST7LQ8TDW4 575 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 SNX33Q8WV41 574 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 IPCEF1Q8WWN9 437 aaPredicted RBP5.45□□□□□ -1.54
LTBR-212ENST00000543542 ASB17Q8WXJ9 295 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 PIGTQ969N2 578 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 APOBEC3DQ96AK3 386 aaPredicted RBP5.45□□□□□ -1.54
LTBR-212ENST00000543542 ZNF799Q96GE5 643 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 PGAM5Q96HS1 289 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 COG8Q96MW5 612 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 MYCBPQ99417 103 aaPredicted RBP5.45□□□□□ -1.54
LTBR-212ENST00000543542 MNTQ99583 582 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 KCNJ15Q99712 375 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 VRK1Q99986 396 aaPredicted RBP5.45□□□□□ -1.54
LTBR-212ENST00000543542 SYT3Q9BQG1 590 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 OR2J1Q9GZK6 312 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 Q9H521 79 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 CXorf56Q9H5V9 222 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 SP140LQ9H930 580 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 ADGRL4Q9HBW9 690 aa5.45□□□□□ -1.54
LTBR-212ENST00000543542 AMBNQ9NP70 447 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms