RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	CD276	Q5ZPR3	534 aa		5.61	□□□□□ -1.51
CIT-213	ENST00000543324	TRIQK	Q629K1	86 aa		5.61	□□□□□ -1.51
CIT-213	ENST00000543324	ZNF730	Q6ZMV8	503 aa		5.61	□□□□□ -1.51
CIT-213	ENST00000543324	ZNF704	Q6ZNC4	412 aa	Predicted RBP	5.61	□□□□□ -1.51
CIT-213	ENST00000543324	OVCH2	Q7RTZ1	564 aa		5.61	□□□□□ -1.51
CIT-213	ENST00000543324	TSEN54	Q7Z6J9	526 aa	Known RBP	5.61	□□□□□ -1.51
CIT-213	ENST00000543324	VTCN1	Q7Z7D3	282 aa		5.61	□□□□□ -1.51
CIT-213	ENST00000543324	ANKRD46	Q86W74	232 aa		5.61	□□□□□ -1.51
CIT-213	ENST00000543324	TUSC5	Q8IXB3	177 aa		5.61	□□□□□ -1.51
CIT-213	ENST00000543324	CMIP	Q8IY22	773 aa		5.61	□□□□□ -1.51
CIT-213	ENST00000543324	ZNF619	Q8N2I2	560 aa		5.61	□□□□□ -1.51
CIT-213	ENST00000543324	ZNF611	Q8N823	705 aa		5.61	□□□□□ -1.51
CIT-213	ENST00000543324	C19orf18	Q8NEA5	215 aa		5.61	□□□□□ -1.51
CIT-213	ENST00000543324	ZNF680	Q8NEM1	530 aa		5.61	□□□□□ -1.51
CIT-213	ENST00000543324	STEAP2	Q8NFT2	490 aa		5.61	□□□□□ -1.51
CIT-213	ENST00000543324	OR8H1	Q8NGG4	311 aa		5.61	□□□□□ -1.51
CIT-213	ENST00000543324	OR4A15	Q8NGL6	344 aa		5.61	□□□□□ -1.51
CIT-213	ENST00000543324	MRAP	Q8TCY5	172 aa		5.61	□□□□□ -1.51
CIT-213	ENST00000543324	SLC25A43	Q8WUT9	341 aa	Predicted RBP	5.61	□□□□□ -1.51
CIT-213	ENST00000543324	PMM1	Q92871	262 aa		5.61	□□□□□ -1.51
CIT-213	ENST00000543324	S100PBP	Q96BU1	408 aa		5.61	□□□□□ -1.51
CIT-213	ENST00000543324	ZG16B	Q96DA0	208 aa		5.61	□□□□□ -1.51
CIT-213	ENST00000543324	TRMT61A	Q96FX7	289 aa	Known RBP	5.61	□□□□□ -1.51
CIT-213	ENST00000543324	DIRAS2	Q96HU8	199 aa		5.61	□□□□□ -1.51
CIT-213	ENST00000543324	BOD1	Q96IK1	185 aa		5.61	□□□□□ -1.51
CIT-213	ENST00000543324	FEV	Q99581	238 aa		5.61	□□□□□ -1.51
CIT-213	ENST00000543324	INPP5K	Q9BT40	448 aa		5.61	□□□□□ -1.51
CIT-213	ENST00000543324	TMEM43	Q9BTV4	400 aa		5.61	□□□□□ -1.51
CIT-213	ENST00000543324	POTEKP	Q9BYX7	375 aa		5.61	□□□□□ -1.51
CIT-213	ENST00000543324	QRSL1	Q9H0R6	528 aa	Known RBP	5.61	□□□□□ -1.51
CIT-213	ENST00000543324	ABCB9	Q9NP78	766 aa		5.61	□□□□□ -1.51
CIT-213	ENST00000543324	TXNL4B	Q9NX01	149 aa	Known RBP	5.61	□□□□□ -1.51
CIT-213	ENST00000543324	IMPAD1	Q9NX62	359 aa		5.61	□□□□□ -1.51
CIT-213	ENST00000543324	EMC3	Q9P0I2	261 aa		5.61	□□□□□ -1.51
CIT-213	ENST00000543324	ZMAT5	Q9UDW3	170 aa	Known RBP	5.61	□□□□□ -1.51
CIT-213	ENST00000543324	MALT1	Q9UDY8	824 aa		5.61	□□□□□ -1.51
CIT-213	ENST00000543324	KIF25	Q9UIL4	384 aa		5.61	□□□□□ -1.51
CIT-213	ENST00000543324	ADAM30	Q9UKF2	790 aa		5.61	□□□□□ -1.51
CIT-213	ENST00000543324	SLC35A3	Q9Y2D2	325 aa		5.61	□□□□□ -1.51
CIT-213	ENST00000543324	CDH10	Q9Y6N8	788 aa		5.61	□□□□□ -1.51
CIT-213	ENST00000543324		A0A1W2PNR3	127 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324		A0A1W2PQL4	384 aa	Predicted RBP	5.6	□□□□□ -1.51
CIT-213	ENST00000543324	ATP6V1G2-DDX39B	F2Z307	99 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	INMT-MINDY4	F8WBC2	141 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324		I3L521	148 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	DIRAS1	O95057	198 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	CDRT1	O95170	752 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	DHFR	P00374	187 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	PLG	P00747	810 aa	Predicted RBP	5.6	□□□□□ -1.51
CIT-213	ENST00000543324	IGHV4-39	P01824	125 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	PRB2	P02812	416 aa	Predicted RBP	5.6	□□□□□ -1.51
CIT-213	ENST00000543324	ADRA2A	P08913	450 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	TSPAN19	P0C672	248 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	HSMCR30	P0CW71	290 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	OR12D1	P0DN82	309 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	SLC2A2	P11168	524 aa	Predicted RBP	5.6	□□□□□ -1.51
CIT-213	ENST00000543324	PGC	P20142	388 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	AZGP1	P25311	298 aa	Known RBP	5.6	□□□□□ -1.51
CIT-213	ENST00000543324	APOBEC1	P41238	236 aa	Known RBP	5.6	□□□□□ -1.51
CIT-213	ENST00000543324	KCNJ5	P48544	419 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	KHK	P50053	298 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	NUDT6	P53370	316 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	CRYBA2	P53672	197 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	CRISP1	P54107	249 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	CRISP3	P54108	245 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	RAG2	P55895	527 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	LOXL3	P58215	753 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	RPS4X	P62701	263 aa	Known RBP	5.6	□□□□□ -1.51
CIT-213	ENST00000543324	HSF2	Q03933	536 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	RBBP4	Q09028	425 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	TPBG	Q13641	420 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	C1D	Q13901	141 aa	Known RBP	5.6	□□□□□ -1.51
CIT-213	ENST00000543324	GPR68	Q15743	365 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	EXOC3L2	Q2M3D2	409 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	KLHL22	Q53GT1	634 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	PYDC2	Q56P42	97 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	COX20	Q5RI15	118 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	C12orf73	Q69YU5	71 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	5.6	□□□□□ -1.51
CIT-213	ENST00000543324	CD200R1L	Q6Q8B3	271 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	TMPPE	Q6ZT21	453 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	GRINA	Q7Z429	371 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	ATG4D	Q86TL0	474 aa	Predicted RBP	5.6	□□□□□ -1.51
CIT-213	ENST00000543324	COMMD7	Q86VX2	200 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	SLC30A8	Q8IWU4	369 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	OR10H5	Q8NGA6	315 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	ZNF431	Q8TF32	576 aa	Predicted RBP	5.6	□□□□□ -1.51
CIT-213	ENST00000543324	UFD1	Q92890	307 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	RAB8B	Q92930	207 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	PTP4A1	Q93096	173 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	UPRT	Q96BW1	309 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	PLPPR2	Q96GM1	343 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	ARL5B	Q96KC2	179 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	KCTD7	Q96MP8	289 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	OR2M2	Q96R28	347 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	USB1	Q9BQ65	265 aa	Known RBP	5.6	□□□□□ -1.51
CIT-213	ENST00000543324	SLC35A5	Q9BS91	424 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	RSPO3	Q9BXY4	272 aa	Predicted RBP	5.6	□□□□□ -1.51
CIT-213	ENST00000543324	PRRG4	Q9BZD6	226 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	TRIM2	Q9C040	744 aa		5.6	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms