RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 GRK5P34947 590 aa13.17□□□□□ -0.3
ECHDC2-223ENST00000542552 MAGEB1P43366 347 aa13.17□□□□□ -0.3
ECHDC2-223ENST00000542552 RGS6P49758 472 aa13.17□□□□□ -0.3
ECHDC2-223ENST00000542552 PSG7Q13046 419 aa13.17□□□□□ -0.3
ECHDC2-223ENST00000542552 GGTLC2Q14390 218 aa13.17□□□□□ -0.3
ECHDC2-223ENST00000542552 PCK2Q16822 640 aa13.17□□□□□ -0.3
ECHDC2-223ENST00000542552 SHQ1Q6PI26 577 aaKnown RBP13.17□□□□□ -0.3
ECHDC2-223ENST00000542552 COLCA1Q6ZS62 124 aa13.17□□□□□ -0.3
ECHDC2-223ENST00000542552 LINC00346Q8IVM7 164 aa13.17□□□□□ -0.3
ECHDC2-223ENST00000542552 PROKR2Q8NFJ6 384 aa13.17□□□□□ -0.3
ECHDC2-223ENST00000542552 SNX33Q8WV41 574 aa13.17□□□□□ -0.3
ECHDC2-223ENST00000542552 YIPF5Q969M3 257 aa13.17□□□□□ -0.3
ECHDC2-223ENST00000542552 NRBF2Q96F24 287 aa13.17□□□□□ -0.3
ECHDC2-223ENST00000542552 DUS3LQ96G46 650 aaKnown RBP13.17□□□□□ -0.3
ECHDC2-223ENST00000542552 CHODLQ9H9P2 273 aa13.17□□□□□ -0.3
ECHDC2-223ENST00000542552 PNRC2Q9NPJ4 139 aaKnown RBP13.17□□□□□ -0.3
ECHDC2-223ENST00000542552 JMJD1CQ15652 2540 aa13.17□□□□□ -0.3
ECHDC2-223ENST00000542552 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.16□□□□□ -0.38e-12■□□□□ 11.1
ECHDC2-223ENST00000542552 LILRA1O75019 489 aa13.16□□□□□ -0.3
ECHDC2-223ENST00000542552 DEAF1O75398 565 aaPredicted RBP13.16□□□□□ -0.3
ECHDC2-223ENST00000542552 TIPRLO75663 272 aa13.16□□□□□ -0.3
ECHDC2-223ENST00000542552 IFNGP01579 166 aa13.16□□□□□ -0.3
ECHDC2-223ENST00000542552 HLA-DQA2P01906 255 aa13.16□□□□□ -0.3
ECHDC2-223ENST00000542552 MT-ND5P03915 603 aa13.16□□□□□ -0.3
ECHDC2-223ENST00000542552 PSKH1P11801 424 aa13.16□□□□□ -0.3
ECHDC2-223ENST00000542552 OSMP13725 252 aa13.16□□□□□ -0.3
ECHDC2-223ENST00000542552 ANXA8P13928 327 aa13.16□□□□□ -0.3
ECHDC2-223ENST00000542552 SPI1P17947 270 aa13.16□□□□□ -0.3
ECHDC2-223ENST00000542552 KITLGP21583 273 aa13.16□□□□□ -0.3
ECHDC2-223ENST00000542552 ACHEP22303 614 aa13.16□□□□□ -0.3
ECHDC2-223ENST00000542552 PRKACGP22612 351 aa13.16□□□□□ -0.3
ECHDC2-223ENST00000542552 LIPAP38571 399 aa13.16□□□□□ -0.3
ECHDC2-223ENST00000542552 ZNF81P51508 661 aa13.16□□□□□ -0.3
ECHDC2-223ENST00000542552 CCL8P80075 99 aa13.16□□□□□ -0.3
ECHDC2-223ENST00000542552 ECH1Q13011 328 aa13.16□□□□□ -0.3
ECHDC2-223ENST00000542552 CCNIQ14094 377 aa13.16□□□□□ -0.3
ECHDC2-223ENST00000542552 KRTAP21-3Q3LHN1 58 aa13.16□□□□□ -0.3
ECHDC2-223ENST00000542552 TEX30Q5JUR7 227 aa13.16□□□□□ -0.3
ECHDC2-223ENST00000542552 ACSM5Q6NUN0 579 aa13.16□□□□□ -0.3
ECHDC2-223ENST00000542552 ASRGL1Q7L266 308 aa13.16□□□□□ -0.3
ECHDC2-223ENST00000542552 IQCF1Q8N6M8 205 aa13.16□□□□□ -0.3
ECHDC2-223ENST00000542552 OR51L1Q8NGJ5 315 aa13.16□□□□□ -0.3
ECHDC2-223ENST00000542552 OR9Q1Q8NGQ5 310 aa13.16□□□□□ -0.3
ECHDC2-223ENST00000542552 TEX47Q8TBZ9 253 aa13.16□□□□□ -0.3
ECHDC2-223ENST00000542552 HAVCR1Q96D42 359 aa13.16□□□□□ -0.3
ECHDC2-223ENST00000542552 MAP6Q96JE9 813 aa13.16□□□□□ -0.3
ECHDC2-223ENST00000542552 COG8Q96MW5 612 aa13.16□□□□□ -0.3
ECHDC2-223ENST00000542552 CDADC1Q9BWV3 514 aa13.16□□□□□ -0.3
ECHDC2-223ENST00000542552 CYSLTR2Q9NS75 346 aa13.16□□□□□ -0.3
ECHDC2-223ENST00000542552 CGGBP1Q9UFW8 167 aaPredicted RBP13.16□□□□□ -0.3
ECHDC2-223ENST00000542552 CUBNO60494 3623 aa13.16□□□□□ -0.3
ECHDC2-223ENST00000542552 MXRA5Q9NR99 2828 aa13.16□□□□□ -0.3
ECHDC2-223ENST00000542552 TVP23AA6NH52 213 aa13.15□□□□□ -0.3
ECHDC2-223ENST00000542552 ZSCAN5BA6NJL1 495 aa13.15□□□□□ -0.3
ECHDC2-223ENST00000542552 RIIAD1A6NNX1 92 aa13.15□□□□□ -0.3
ECHDC2-223ENST00000542552 H3BN98 237 aa13.15□□□□□ -0.3
ECHDC2-223ENST00000542552 IGHV1-46P01743 117 aa13.15□□□□□ -0.3
ECHDC2-223ENST00000542552 GYPBP06028 91 aa13.15□□□□□ -0.3
ECHDC2-223ENST00000542552 CLUP10909 449 aa13.15□□□□□ -0.3
ECHDC2-223ENST00000542552 ZNF823P16415 610 aa13.15□□□□□ -0.3
ECHDC2-223ENST00000542552 CRYBB2P43320 205 aa13.15□□□□□ -0.3
ECHDC2-223ENST00000542552 TMEM33P57088 247 aa13.15□□□□□ -0.3
ECHDC2-223ENST00000542552 CDK5Q00535 292 aa13.15□□□□□ -0.3
ECHDC2-223ENST00000542552 GINS1Q14691 196 aa13.15□□□□□ -0.3
ECHDC2-223ENST00000542552 FAM209AQ5JX71 171 aa13.15□□□□□ -0.3
ECHDC2-223ENST00000542552 C6orf52Q5T4I8 152 aa13.15□□□□□ -0.3
ECHDC2-223ENST00000542552 LINC01590Q5TEZ4 76 aa13.15□□□□□ -0.3
ECHDC2-223ENST00000542552 SLC27A4Q6P1M0 643 aa13.15□□□□□ -0.3
ECHDC2-223ENST00000542552 FAHD1Q6P587 224 aa13.15□□□□□ -0.3
ECHDC2-223ENST00000542552 LYPD4Q6UWN0 246 aa13.15□□□□□ -0.3
ECHDC2-223ENST00000542552 OR10S1Q8NGN2 331 aa13.15□□□□□ -0.3
ECHDC2-223ENST00000542552 OR2AJ1Q8NGZ0 328 aa13.15□□□□□ -0.3
ECHDC2-223ENST00000542552 PTP4A1Q93096 173 aa13.15□□□□□ -0.3
ECHDC2-223ENST00000542552 ATF6BQ99941 703 aa13.15□□□□□ -0.3
ECHDC2-223ENST00000542552 HCAR1Q9BXC0 346 aa13.15□□□□□ -0.3
ECHDC2-223ENST00000542552 C1QTNF5Q9BXJ0 243 aa13.15□□□□□ -0.3
ECHDC2-223ENST00000542552 WDR76Q9H967 626 aa13.15□□□□□ -0.3
ECHDC2-223ENST00000542552 ZNF556Q9HAH1 456 aa13.15□□□□□ -0.3
ECHDC2-223ENST00000542552 COMMD3-BMI1R4GMX3 469 aa13.15□□□□□ -0.3
ECHDC2-223ENST00000542552 MALRD1Q5VYJ5 2156 aa13.14□□□□□ -0.31
ECHDC2-223ENST00000542552 PLSCR5A0PG75 271 aa13.14□□□□□ -0.31
ECHDC2-223ENST00000542552 ACSM4P0C7M7 580 aa13.14□□□□□ -0.31
ECHDC2-223ENST00000542552 RAC2P15153 192 aa13.14□□□□□ -0.31
ECHDC2-223ENST00000542552 ZNF3P17036 446 aa13.14□□□□□ -0.31
ECHDC2-223ENST00000542552 FMO3P31513 532 aa13.14□□□□□ -0.31
ECHDC2-223ENST00000542552 GZMKP49863 264 aa13.14□□□□□ -0.31
ECHDC2-223ENST00000542552 PPP2R2BQ00005 443 aa13.14□□□□□ -0.31
ECHDC2-223ENST00000542552 CDK5R2Q13319 367 aa13.14□□□□□ -0.31
ECHDC2-223ENST00000542552 ATP6AP1Q15904 470 aa13.14□□□□□ -0.31
ECHDC2-223ENST00000542552 C1orf146Q5VVC0 180 aa13.14□□□□□ -0.31
ECHDC2-223ENST00000542552 CYB5R2Q6BCY4 276 aa13.14□□□□□ -0.31
ECHDC2-223ENST00000542552 FBXW12Q6X9E4 464 aa13.14□□□□□ -0.31
ECHDC2-223ENST00000542552 ZNF511Q8NB15 262 aa13.14□□□□□ -0.31
ECHDC2-223ENST00000542552 DNAJC9Q8WXX5 260 aa13.14□□□□□ -0.31
ECHDC2-223ENST00000542552 HPS1Q92902 700 aa13.14□□□□□ -0.31
ECHDC2-223ENST00000542552 APOBEC3DQ96AK3 386 aaPredicted RBP13.14□□□□□ -0.31
ECHDC2-223ENST00000542552 CMBLQ96DG6 245 aa13.14□□□□□ -0.31
ECHDC2-223ENST00000542552 PITX2Q99697 317 aa13.14□□□□□ -0.31
ECHDC2-223ENST00000542552 ZNF275Q9NSD4 429 aaPredicted RBP13.14□□□□□ -0.31
ECHDC2-223ENST00000542552 DDX28Q9NUL7 540 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms