RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 PRTGQ2VWP7 1150 aa13.75□□□□□ -0.21
CNOT9-208ENST00000542068 SLC18B1Q6NT16 456 aa13.75□□□□□ -0.21
CNOT9-208ENST00000542068 PAPD4Q6PIY7 484 aaKnown RBP13.75□□□□□ -0.21
CNOT9-208ENST00000542068 FJX1Q86VR8 437 aa13.75□□□□□ -0.21
CNOT9-208ENST00000542068 COMMD2Q86X83 199 aa13.75□□□□□ -0.21
CNOT9-208ENST00000542068 OR13C8Q8NGS7 320 aa13.75□□□□□ -0.21
CNOT9-208ENST00000542068 RPS4Y2Q8TD47 263 aa13.75□□□□□ -0.21
CNOT9-208ENST00000542068 TMED6Q8WW62 240 aa13.75□□□□□ -0.21
CNOT9-208ENST00000542068 ASB5Q8WWX0 329 aa13.75□□□□□ -0.21
CNOT9-208ENST00000542068 ABHD6Q9BV23 337 aa13.75□□□□□ -0.21
CNOT9-208ENST00000542068 SLC6A15Q9H2J7 730 aa13.75□□□□□ -0.21
CNOT9-208ENST00000542068 GPR179Q6PRD1 2367 aa13.74□□□□□ -0.21
CNOT9-208ENST00000542068 ZNF705EA8MWA4 302 aaPredicted RBP13.74□□□□□ -0.21
CNOT9-208ENST00000542068 F8W036 122 aa13.74□□□□□ -0.21
CNOT9-208ENST00000542068 HLA-DOBP13765 273 aa13.74□□□□□ -0.21
CNOT9-208ENST00000542068 GNB3P16520 340 aa13.74□□□□□ -0.21
CNOT9-208ENST00000542068 RIDAP52758 137 aaKnown RBP13.74□□□□□ -0.21
CNOT9-208ENST00000542068 BLOC1S1P78537 153 aa13.74□□□□□ -0.21
CNOT9-208ENST00000542068 GFOD2Q3B7J2 385 aa13.74□□□□□ -0.21
CNOT9-208ENST00000542068 FAM69BQ5VUD6 431 aa13.74□□□□□ -0.21
CNOT9-208ENST00000542068 OR4D6Q8NGJ1 314 aa13.74□□□□□ -0.21
CNOT9-208ENST00000542068 DCUN1D4Q92564 292 aa13.74□□□□□ -0.21
CNOT9-208ENST00000542068 C5orf34Q96MH7 638 aa13.74□□□□□ -0.21
CNOT9-208ENST00000542068 NUDT22Q9BRQ3 303 aa13.74□□□□□ -0.21
CNOT9-208ENST00000542068 MED9Q9NWA0 146 aa13.74□□□□□ -0.21
CNOT9-208ENST00000542068 EPHA6Q9UF33 1036 aa13.74□□□□□ -0.21
CNOT9-208ENST00000542068 OR6C76A6NM76 312 aa13.74□□□□□ -0.21
CNOT9-208ENST00000542068 H0YIG0 161 aa13.74□□□□□ -0.21
CNOT9-208ENST00000542068 ZNF432O94892 652 aa13.74□□□□□ -0.21
CNOT9-208ENST00000542068 FARS2O95363 451 aaKnown RBP13.74□□□□□ -0.21
CNOT9-208ENST00000542068 PGAM2P15259 253 aa13.74□□□□□ -0.21
CNOT9-208ENST00000542068 RAB3AP20336 220 aa13.74□□□□□ -0.21
CNOT9-208ENST00000542068 CSRP1P21291 193 aaKnown RBP13.74□□□□□ -0.21
CNOT9-208ENST00000542068 PPIAP62937 165 aaKnown RBP13.74□□□□□ -0.21
CNOT9-208ENST00000542068 SKP2Q13309 424 aa13.74□□□□□ -0.21
CNOT9-208ENST00000542068 SERTAD2Q14140 314 aa13.74□□□□□ -0.21
CNOT9-208ENST00000542068 PUSL1Q8N0Z8 303 aaKnown RBP13.74□□□□□ -0.21
CNOT9-208ENST00000542068 OR5M8Q8NGP6 311 aa13.74□□□□□ -0.21
CNOT9-208ENST00000542068 SELENOIQ9C0D9 397 aa13.74□□□□□ -0.21
CNOT9-208ENST00000542068 LRP12Q9Y561 859 aa13.74□□□□□ -0.21
CNOT9-208ENST00000542068 ERCC1P07992 297 aaPredicted RBP13.74□□□□□ -0.21
CNOT9-208ENST00000542068 IL11P20809 199 aa13.74□□□□□ -0.21
CNOT9-208ENST00000542068 AGTR1P30556 359 aa13.74□□□□□ -0.21
CNOT9-208ENST00000542068 HRH1P35367 487 aa13.74□□□□□ -0.21
CNOT9-208ENST00000542068 MECP2P51608 486 aaKnown RBP13.74□□□□□ -0.21
CNOT9-208ENST00000542068 ZNF679Q8IYX0 411 aa13.74□□□□□ -0.21
CNOT9-208ENST00000542068 SLC43A2Q8N370 569 aa13.74□□□□□ -0.21
CNOT9-208ENST00000542068 GTPBP8Q8N3Z3 284 aaPredicted RBP13.74□□□□□ -0.21
CNOT9-208ENST00000542068 PTPMT1Q8WUK0 201 aaPredicted RBP13.74□□□□□ -0.21
CNOT9-208ENST00000542068 NUDT9Q9BW91 350 aa13.74□□□□□ -0.21
CNOT9-208ENST00000542068 MRPL22Q9NWU5 206 aaKnown RBP13.74□□□□□ -0.21
CNOT9-208ENST00000542068 FAM96BQ9Y3D0 163 aa13.74□□□□□ -0.21
CNOT9-208ENST00000542068 A0A0D9SG52 128 aa13.73□□□□□ -0.21
CNOT9-208ENST00000542068 IFNA6P05013 189 aa13.73□□□□□ -0.21
CNOT9-208ENST00000542068 CALCRP30988 508 aa13.73□□□□□ -0.21
CNOT9-208ENST00000542068 ZNF117Q03924 483 aa13.73□□□□□ -0.21
CNOT9-208ENST00000542068 SLC9A3R2Q15599 337 aa13.73□□□□□ -0.21
CNOT9-208ENST00000542068 LINC00518Q8N0U6 118 aa13.73□□□□□ -0.21
CNOT9-208ENST00000542068 OR10R2Q8NGX6 335 aa13.73□□□□□ -0.21
CNOT9-208ENST00000542068 PMM1Q92871 262 aa13.73□□□□□ -0.21
CNOT9-208ENST00000542068 FGGYQ96C11 551 aa13.73□□□□□ -0.21
CNOT9-208ENST00000542068 ZDHHC12Q96GR4 267 aa13.73□□□□□ -0.21
CNOT9-208ENST00000542068 LOC107986453A0A1B0GWG9 222 aa13.73□□□□□ -0.21
CNOT9-208ENST00000542068 A0A1W2PPC1 479 aa13.73□□□□□ -0.21
CNOT9-208ENST00000542068 FAM221BA6H8Z2 402 aa13.73□□□□□ -0.21
CNOT9-208ENST00000542068 RNF222A6NCQ9 220 aa13.73□□□□□ -0.21
CNOT9-208ENST00000542068 GP1BBP13224 206 aa13.73□□□□□ -0.21
CNOT9-208ENST00000542068 HSD17B7P56937 341 aa13.73□□□□□ -0.21
CNOT9-208ENST00000542068 INSM1Q01101 510 aaPredicted RBP13.73□□□□□ -0.21
CNOT9-208ENST00000542068 EGR3Q06889 387 aa13.73□□□□□ -0.21
CNOT9-208ENST00000542068 SMRP1Q8NCR6 262 aa13.73□□□□□ -0.21
CNOT9-208ENST00000542068 ELP5Q8TE02 316 aa13.73□□□□□ -0.21
CNOT9-208ENST00000542068 CTSFQ9UBX1 484 aa13.73□□□□□ -0.21
CNOT9-208ENST00000542068 WDFY3Q8IZQ1 3526 aa13.73□□□□□ -0.21
CNOT9-208ENST00000542068 BCL2L11O43521 198 aa13.72□□□□□ -0.21
CNOT9-208ENST00000542068 GP1BAP07359 652 aa13.72□□□□□ -0.21
CNOT9-208ENST00000542068 PVALBP20472 110 aaPredicted RBP13.72□□□□□ -0.21
CNOT9-208ENST00000542068 CD96P40200 585 aa13.72□□□□□ -0.21
CNOT9-208ENST00000542068 CASRP41180 1078 aa13.72□□□□□ -0.21
CNOT9-208ENST00000542068 PLEKHN1Q494U1 663 aaPredicted RBP13.72□□□□□ -0.21
CNOT9-208ENST00000542068 CCDC157Q569K6 752 aa13.72□□□□□ -0.21
CNOT9-208ENST00000542068 CLVS2Q5SYC1 327 aa13.72□□□□□ -0.21
CNOT9-208ENST00000542068 COX15Q7KZN9 410 aa13.72□□□□□ -0.21
CNOT9-208ENST00000542068 SLC29A4Q7RTT9 530 aa13.72□□□□□ -0.21
CNOT9-208ENST00000542068 TMPRSS9Q7Z410 1059 aa13.72□□□□□ -0.21
CNOT9-208ENST00000542068 KCNRGQ8N5I3 272 aa13.72□□□□□ -0.21
CNOT9-208ENST00000542068 GPX7Q96SL4 187 aaPredicted RBP13.72□□□□□ -0.21
CNOT9-208ENST00000542068 HRH4Q9H3N8 390 aa13.72□□□□□ -0.21
CNOT9-208ENST00000542068 GAREM1Q9H706 876 aa13.72□□□□□ -0.21
CNOT9-208ENST00000542068 TNFSF18Q9UNG2 199 aa13.72□□□□□ -0.21
CNOT9-208ENST00000542068 ABCD4O14678 606 aa13.72□□□□□ -0.21
CNOT9-208ENST00000542068 ZNF208O43345 1280 aa13.72□□□□□ -0.21
CNOT9-208ENST00000542068 FOLR1P15328 257 aa13.72□□□□□ -0.21
CNOT9-208ENST00000542068 FBLP22087 321 aaKnown RBP13.72□□□□□ -0.21
CNOT9-208ENST00000542068 RNF144BQ7Z419 303 aa13.72□□□□□ -0.21
CNOT9-208ENST00000542068 DCXRQ7Z4W1 244 aa13.72□□□□□ -0.21
CNOT9-208ENST00000542068 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.72□□□□□ -0.21
CNOT9-208ENST00000542068 ZNF615Q8N8J6 731 aa13.72□□□□□ -0.21
CNOT9-208ENST00000542068 BHLHE23Q8NDY6 225 aa13.72□□□□□ -0.21
CNOT9-208ENST00000542068 EMC6Q9BV81 110 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms