RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 RCC1P18754 421 aaPredicted RBP13.34□□□□□ -0.27
AC005840.4-201ENST00000541242 ALOX5APP20292 161 aa13.34□□□□□ -0.27
AC005840.4-201ENST00000541242 MGAT2Q10469 447 aa13.34□□□□□ -0.27
AC005840.4-201ENST00000541242 RNASE10Q5GAN6 216 aaKnown RBP13.34□□□□□ -0.27
AC005840.4-201ENST00000541242 NCMAPQ5T1S8 102 aa13.34□□□□□ -0.27
AC005840.4-201ENST00000541242 FBXO42Q6P3S6 717 aa13.34□□□□□ -0.27
AC005840.4-201ENST00000541242 ABHD13Q7L211 337 aa13.34□□□□□ -0.27
AC005840.4-201ENST00000541242 SLC43A2Q8N370 569 aa13.34□□□□□ -0.27
AC005840.4-201ENST00000541242 C15orf54Q8N8G6 183 aa13.34□□□□□ -0.27
AC005840.4-201ENST00000541242 TSACCQ96A04 125 aaPredicted RBP13.34□□□□□ -0.27
AC005840.4-201ENST00000541242 FBXL21Q9UKT6 434 aa13.34□□□□□ -0.27
AC005840.4-201ENST00000541242 TNRC18O15417 2968 aaPredicted RBP13.34□□□□□ -0.27
AC005840.4-201ENST00000541242 PRUNE2Q8WUY3 3088 aa13.34□□□□□ -0.27
AC005840.4-201ENST00000541242 A0A087WUJ7 227 aa13.33□□□□□ -0.28
AC005840.4-201ENST00000541242 A0A1W2PPH5 198 aa13.33□□□□□ -0.28
AC005840.4-201ENST00000541242 CTSVO60911 334 aa13.33□□□□□ -0.28
AC005840.4-201ENST00000541242 STK17BO94768 372 aa13.33□□□□□ -0.28
AC005840.4-201ENST00000541242 IL2RAP01589 272 aa13.33□□□□□ -0.28
AC005840.4-201ENST00000541242 SNRNP70P08621 437 aaKnown RBP13.33□□□□□ -0.28
AC005840.4-201ENST00000541242 SLC35G6P0C7Q6 338 aa13.33□□□□□ -0.28
AC005840.4-201ENST00000541242 OR2B8PP59922 312 aa13.33□□□□□ -0.28
AC005840.4-201ENST00000541242 RPS4XP62701 263 aaKnown RBP13.33□□□□□ -0.28
AC005840.4-201ENST00000541242 PSG6Q00889 435 aa13.33□□□□□ -0.28
AC005840.4-201ENST00000541242 SPOCK1Q08629 439 aa13.33□□□□□ -0.28
AC005840.4-201ENST00000541242 SECTM1Q8WVN6 248 aa13.33□□□□□ -0.28
AC005840.4-201ENST00000541242 RELTQ969Z4 430 aa13.33□□□□□ -0.28
AC005840.4-201ENST00000541242 RBM18Q96H35 190 aaKnown RBP13.33□□□□□ -0.28
AC005840.4-201ENST00000541242 IP6K3Q96PC2 410 aa13.33□□□□□ -0.28
AC005840.4-201ENST00000541242 OR2M4Q96R27 311 aa13.33□□□□□ -0.28
AC005840.4-201ENST00000541242 EGLN1Q9GZT9 426 aa13.33□□□□□ -0.28
AC005840.4-201ENST00000541242 PARP12Q9H0J9 701 aaKnown RBP13.33□□□□□ -0.28
AC005840.4-201ENST00000541242 ELOVL3Q9HB03 270 aa13.33□□□□□ -0.28
AC005840.4-201ENST00000541242 IGKV1D-42A0A075B6H8 117 aa13.33□□□□□ -0.28
AC005840.4-201ENST00000541242 PRAMEF26H0Y7S4 382 aa13.33□□□□□ -0.28
AC005840.4-201ENST00000541242 HRKO00198 91 aa13.33□□□□□ -0.28
AC005840.4-201ENST00000541242 EFSO43281 561 aa13.33□□□□□ -0.28
AC005840.4-201ENST00000541242 LRP3O75074 770 aa13.33□□□□□ -0.28
AC005840.4-201ENST00000541242 MED6O75586 246 aa13.33□□□□□ -0.28
AC005840.4-201ENST00000541242 ADAP1O75689 374 aa13.33□□□□□ -0.28
AC005840.4-201ENST00000541242 ZNF432O94892 652 aa13.33□□□□□ -0.28
AC005840.4-201ENST00000541242 LY86O95711 162 aa13.33□□□□□ -0.28
AC005840.4-201ENST00000541242 PRF1P14222 555 aa13.33□□□□□ -0.28
AC005840.4-201ENST00000541242 MEP1BQ16820 701 aa13.33□□□□□ -0.28
AC005840.4-201ENST00000541242 TMEM225Q6GV28 225 aa13.33□□□□□ -0.28
AC005840.4-201ENST00000541242 MDGA2Q7Z553 956 aa13.33□□□□□ -0.28
AC005840.4-201ENST00000541242 FJX1Q86VR8 437 aa13.33□□□□□ -0.28
AC005840.4-201ENST00000541242 JAGN1Q8N5M9 183 aa13.33□□□□□ -0.28
AC005840.4-201ENST00000541242 CYYR1Q96J86 154 aa13.33□□□□□ -0.28
AC005840.4-201ENST00000541242 SERINC2Q96SA4 455 aa13.33□□□□□ -0.28
AC005840.4-201ENST00000541242 SULT4A1Q9BR01 284 aa13.33□□□□□ -0.28
AC005840.4-201ENST00000541242 TRIOO75962 3097 aa13.33□□□□□ -0.28
AC005840.4-201ENST00000541242 BRWD1Q9NSI6 2320 aa13.32□□□□□ -0.28
AC005840.4-201ENST00000541242 MBTPS2O43462 519 aa13.32□□□□□ -0.28
AC005840.4-201ENST00000541242 AGAP20933 346 aa13.32□□□□□ -0.28
AC005840.4-201ENST00000541242 CTHP32929 405 aa13.32□□□□□ -0.28
AC005840.4-201ENST00000541242 HRH1P35367 487 aa13.32□□□□□ -0.28
AC005840.4-201ENST00000541242 KLHL26Q53HC5 615 aa13.32□□□□□ -0.28
AC005840.4-201ENST00000541242 ALG10Q5BKT4 473 aa13.32□□□□□ -0.28
AC005840.4-201ENST00000541242 MESTQ5EB52 335 aa13.32□□□□□ -0.28
AC005840.4-201ENST00000541242 FAM76BQ5HYJ3 339 aa13.32□□□□□ -0.28
AC005840.4-201ENST00000541242 OR2B11Q5JQS5 317 aa13.32□□□□□ -0.28
AC005840.4-201ENST00000541242 TRAPPC6BQ86SZ2 158 aa13.32□□□□□ -0.28
AC005840.4-201ENST00000541242 PPP1R3BQ86XI6 285 aa13.32□□□□□ -0.28
AC005840.4-201ENST00000541242 ZNF563Q8TA94 476 aa13.32□□□□□ -0.28
AC005840.4-201ENST00000541242 LCN9Q8WX39 176 aa13.32□□□□□ -0.28
AC005840.4-201ENST00000541242 KIR3DX1Q9H7L2 352 aa13.32□□□□□ -0.28
AC005840.4-201ENST00000541242 ARHGEF17Q96PE2 2063 aaPredicted RBP13.32□□□□□ -0.28
AC005840.4-201ENST00000541242 NUDT19A8MXV4 375 aa13.32□□□□□ -0.28
AC005840.4-201ENST00000541242 KLK3P07288 261 aaPredicted RBP13.32□□□□□ -0.28
AC005840.4-201ENST00000541242 MFGE8Q08431 387 aaPredicted RBP13.32□□□□□ -0.28
AC005840.4-201ENST00000541242 RASGEF1BQ0VAM2 473 aa13.32□□□□□ -0.28
AC005840.4-201ENST00000541242 CDPF1Q6NVV7 123 aa13.32□□□□□ -0.28
AC005840.4-201ENST00000541242 ZNF561Q8N587 486 aa13.32□□□□□ -0.28
AC005840.4-201ENST00000541242 OR51F2Q8NH61 342 aa13.32□□□□□ -0.28
AC005840.4-201ENST00000541242 MARCH1Q8TCQ1 289 aa13.32□□□□□ -0.28
AC005840.4-201ENST00000541242 ZNF775Q96BV0 537 aaPredicted RBP13.32□□□□□ -0.28
AC005840.4-201ENST00000541242 BMFQ96LC9 184 aa13.32□□□□□ -0.28
AC005840.4-201ENST00000541242 LRIT1Q9P2V4 623 aa13.32□□□□□ -0.28
AC005840.4-201ENST00000541242 METTL1Q9UBP6 276 aaKnown RBP13.32□□□□□ -0.28
AC005840.4-201ENST00000541242 CACFD1Q9UGQ2 172 aa13.32□□□□□ -0.28
AC005840.4-201ENST00000541242 GATCO43716 136 aaKnown RBP13.31□□□□□ -0.28
AC005840.4-201ENST00000541242 LMX1BO60663 402 aa13.31□□□□□ -0.28
AC005840.4-201ENST00000541242 NKX2-2O95096 273 aa13.31□□□□□ -0.28
AC005840.4-201ENST00000541242 HLA-DQA2P01906 255 aa13.31□□□□□ -0.28
AC005840.4-201ENST00000541242 ACKR3P25106 362 aa13.31□□□□□ -0.28
AC005840.4-201ENST00000541242 TACR3P29371 465 aa13.31□□□□□ -0.28
AC005840.4-201ENST00000541242 PRPS1P60891 318 aa13.31□□□□□ -0.28
AC005840.4-201ENST00000541242 NAAAQ02083 359 aa13.31□□□□□ -0.28
AC005840.4-201ENST00000541242 EBPQ15125 230 aaKnown RBP13.31□□□□□ -0.28
AC005840.4-201ENST00000541242 SGCAQ16586 387 aa13.31□□□□□ -0.28
AC005840.4-201ENST00000541242 ADAMTS17Q8TE56 1095 aa13.31□□□□□ -0.28
AC005840.4-201ENST00000541242 FAM46BQ96A09 425 aa13.31□□□□□ -0.28
AC005840.4-201ENST00000541242 PRRT1Q99946 306 aa13.31□□□□□ -0.28
AC005840.4-201ENST00000541242 SLC17A5Q9NRA2 495 aa13.31□□□□□ -0.28
AC005840.4-201ENST00000541242 PLA2G2EQ9NZK7 142 aa13.31□□□□□ -0.28
AC005840.4-201ENST00000541242 DHDHQ9UQ10 334 aa13.31□□□□□ -0.28
AC005840.4-201ENST00000541242 A0A087WV62 115 aa13.31□□□□□ -0.28
AC005840.4-201ENST00000541242 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.31□□□□□ -0.28
AC005840.4-201ENST00000541242 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.31□□□□□ -0.28
AC005840.4-201ENST00000541242 FBXO24O75426 580 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms