RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 CAMSAP1Q5T5Y3 1602 aa3.57□□□□□ -1.84
YBX3-210ENST00000540975 LRRC66Q68CR7 880 aa3.57□□□□□ -1.84
YBX3-210ENST00000540975 ZNF470Q6ECI4 717 aa3.57□□□□□ -1.84
YBX3-210ENST00000540975 NIPAL3Q6P499 406 aa3.57□□□□□ -1.84
YBX3-210ENST00000540975 C5orf46Q6UWT4 87 aa3.57□□□□□ -1.84
YBX3-210ENST00000540975 PLEKHG7Q6ZR37 379 aa3.57□□□□□ -1.84
YBX3-210ENST00000540975 ERASQ7Z444 233 aa3.57□□□□□ -1.84
YBX3-210ENST00000540975 VTCN1Q7Z7D3 282 aa3.57□□□□□ -1.84
YBX3-210ENST00000540975 N4BP2Q86UW6 1770 aaPredicted RBP3.57□□□□□ -1.84
YBX3-210ENST00000540975 ZNF429Q86V71 674 aa3.57□□□□□ -1.84
YBX3-210ENST00000540975 ZDHHC21Q8IVQ6 265 aa3.57□□□□□ -1.84
YBX3-210ENST00000540975 PRSS58Q8IYP2 241 aa3.57□□□□□ -1.84
YBX3-210ENST00000540975 PDIK1LQ8N165 341 aa3.57□□□□□ -1.84
YBX3-210ENST00000540975 MREGQ8N565 214 aa3.57□□□□□ -1.84
YBX3-210ENST00000540975 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.57□□□□□ -1.84
YBX3-210ENST00000540975 MROH1Q8NDA8 1641 aa3.57□□□□□ -1.84
YBX3-210ENST00000540975 NANPQ8TBE9 248 aa3.57□□□□□ -1.84
YBX3-210ENST00000540975 SLC2A14Q8TDB8 520 aa3.57□□□□□ -1.84
YBX3-210ENST00000540975 SELENOMQ8WWX9 145 aa3.57□□□□□ -1.84
YBX3-210ENST00000540975 CACNG8Q8WXS5 425 aa3.57□□□□□ -1.84
YBX3-210ENST00000540975 RAB1CQ92928 201 aa3.57□□□□□ -1.84
YBX3-210ENST00000540975 UCN3Q969E3 161 aa3.57□□□□□ -1.84
YBX3-210ENST00000540975 RPUSD4Q96CM3 377 aaKnown RBP3.57□□□□□ -1.84
YBX3-210ENST00000540975 PRRC1Q96M27 445 aa3.57□□□□□ -1.84
YBX3-210ENST00000540975 DLC1Q96QB1 1528 aa3.57□□□□□ -1.84
YBX3-210ENST00000540975 PANX1Q96RD7 426 aa3.57□□□□□ -1.84
YBX3-210ENST00000540975 ZNF607Q96SK3 696 aa3.57□□□□□ -1.84
YBX3-210ENST00000540975 ZNF416Q9BWM5 594 aa3.57□□□□□ -1.84
YBX3-210ENST00000540975 ANGPTL4Q9BY76 406 aa3.57□□□□□ -1.84
YBX3-210ENST00000540975 TOLLIPQ9H0E2 274 aa3.57□□□□□ -1.84
YBX3-210ENST00000540975 DNTTIP1Q9H147 329 aa3.57□□□□□ -1.84
YBX3-210ENST00000540975 GAL3ST2Q9H3Q3 398 aa3.57□□□□□ -1.84
YBX3-210ENST00000540975 AUNIPQ9H7T9 357 aa3.57□□□□□ -1.84
YBX3-210ENST00000540975 CHRAC1Q9NRG0 131 aa3.57□□□□□ -1.84
YBX3-210ENST00000540975 SCML1Q9UN30 329 aa3.57□□□□□ -1.84
YBX3-210ENST00000540975 STARD10Q9Y365 291 aa3.57□□□□□ -1.84
YBX3-210ENST00000540975 SLC22A7Q9Y694 548 aa3.57□□□□□ -1.84
YBX3-210ENST00000540975 FRMPD1Q5SYB0 1578 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 CEP170BQ9Y4F5 1589 aaPredicted RBP3.56□□□□□ -1.84
YBX3-210ENST00000540975 NEXMIFQ5QGS0 1516 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 BCL9LQ86UU0 1499 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 EDC4Q6P2E9 1401 aaKnown RBP3.56□□□□□ -1.84
YBX3-210ENST00000540975 A0A1W2PP64 1363 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 RTL9Q8NET4 1388 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 A0A1W2PPV4 95 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 ZNF729A6NN14 1252 aaPredicted RBP3.56□□□□□ -1.84
YBX3-210ENST00000540975 PDZK1P1A8MUH7 402 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 TMEM238C9JI98 176 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 LRRN3E7EW58 273 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 TOR1AO14656 332 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 SLC31A2O15432 143 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 CDH16O75309 829 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 SNAI1O95863 264 aaPredicted RBP3.56□□□□□ -1.84
YBX3-210ENST00000540975 IFNA16P05015 189 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 CCNB1P14635 433 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 HSD11B1P28845 292 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 PHBP35232 272 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 SERPINB5P36952 375 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 ACTR1BP42025 376 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 EMP2P54851 167 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 TAS2R60P59551 318 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 AP3S2P59780 193 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 CXCR4P61073 352 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 AP1S1P61966 158 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 TNNC1P63316 161 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 HSF2Q03933 536 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 RAD51Q06609 339 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 SIGLEC14Q08ET2 396 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 ARFRP1Q13795 201 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 SMCO1Q147U7 214 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 SLC36A3Q495N2 470 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 COQ5Q5HYK3 327 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 SPANXN2Q5MJ10 180 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 PDZK1Q5T2W1 519 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 CASC10Q5T4H9 136 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 BEND3Q5T5X7 828 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 ACSM5Q6NUN0 579 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 PEX26Q7Z412 305 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 NUDCD3Q8IVD9 361 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 H1FOOQ8IZA3 346 aaPredicted RBP3.56□□□□□ -1.84
YBX3-210ENST00000540975 GCNT2Q8N0V5 402 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 CYP4Z2PQ8N1L4 340 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 SLC35F6Q8N357 371 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 SVOPLQ8N434 492 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 C12orf29Q8N999 325 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 OR4K14Q8NGD5 310 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 OR5D18Q8NGL1 313 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 AKR1E2Q96JD6 320 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 PGLYRP4Q96LB8 373 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 NAPGQ99747 312 aaPredicted RBP3.56□□□□□ -1.84
YBX3-210ENST00000540975 TMEM246Q9BRR3 403 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 CENPKQ9BS16 269 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 ZYG11BQ9C0D3 744 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 ALX4Q9H161 411 aaPredicted RBP3.56□□□□□ -1.84
YBX3-210ENST00000540975 VCXQ9H320 206 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 LRRN3Q9H3W5 708 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 CCNB1IP1Q9NPC3 277 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 ADAP2Q9NPF8 381 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 AIG1Q9NVV5 245 aa3.56□□□□□ -1.84
YBX3-210ENST00000540975 RHBDD3Q9Y3P4 386 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms