RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 POU4F3Q15319 338 aa12.23□□□□□ -0.45
RTN3-210ENST00000540798 LPAL2Q16609 132 aa12.23□□□□□ -0.45
RTN3-210ENST00000540798 CD276Q5ZPR3 534 aa12.23□□□□□ -0.45
RTN3-210ENST00000540798 GLT8D1Q68CQ7 371 aa12.23□□□□□ -0.45
RTN3-210ENST00000540798 LRFN4Q6PJG9 635 aa12.23□□□□□ -0.45
RTN3-210ENST00000540798 OR13C3Q8NGS6 347 aa12.23□□□□□ -0.45
RTN3-210ENST00000540798 ZPBPQ9BS86 351 aa12.23□□□□□ -0.45
RTN3-210ENST00000540798 STMN3Q9NZ72 180 aa12.23□□□□□ -0.45
RTN3-210ENST00000540798 LOXL2Q9Y4K0 774 aa12.23□□□□□ -0.45
RTN3-210ENST00000540798 TMEM272A0A1B0GTI8 110 aa12.23□□□□□ -0.45
RTN3-210ENST00000540798 MEGF11A6BM72 1044 aa12.23□□□□□ -0.45
RTN3-210ENST00000540798 TRIM77I1YAP6 450 aa12.23□□□□□ -0.45
RTN3-210ENST00000540798 Q0VFX4 171 aa12.23□□□□□ -0.45
RTN3-210ENST00000540798 MAB21L1Q13394 359 aa12.23□□□□□ -0.45
RTN3-210ENST00000540798 C1orf100Q5SVJ3 147 aa12.23□□□□□ -0.45
RTN3-210ENST00000540798 CFAP77Q6ZQR2 320 aa12.23□□□□□ -0.45
RTN3-210ENST00000540798 PLPP7Q8NBV4 271 aa12.23□□□□□ -0.45
RTN3-210ENST00000540798 UTP23Q9BRU9 249 aaKnown RBP12.23□□□□□ -0.45
RTN3-210ENST00000540798 C20orf85Q9H1P6 137 aa12.23□□□□□ -0.45
RTN3-210ENST00000540798 EMC3Q9P0I2 261 aa12.23□□□□□ -0.45
RTN3-210ENST00000540798 GDF2Q9UK05 429 aaPredicted RBP12.23□□□□□ -0.45
RTN3-210ENST00000540798 CDV3Q9UKY7 258 aaKnown RBP12.23□□□□□ -0.45
RTN3-210ENST00000540798 TCFL5Q9UL49 500 aa12.23□□□□□ -0.45
RTN3-210ENST00000540798 ACSM4P0C7M7 580 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 PTHLHP12272 177 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 ZNF43P17038 809 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 FAPQ12884 760 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 Q5BKY6 102 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 ZNF468Q5VIY5 522 aaPredicted RBP12.22□□□□□ -0.45
RTN3-210ENST00000540798 GPAT4Q86UL3 456 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 RHBDD1Q8TEB9 315 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 GNRHR2Q96P88 292 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 ARRDC1-AS1Q9H2J1 176 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 OR51J1Q9H342 316 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 PNRC2Q9NPJ4 139 aaKnown RBP12.22□□□□□ -0.45
RTN3-210ENST00000540798 OR2M5A3KFT3 312 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 B8ZZF3 427 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 H7C417 338 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 FCN2Q15485 313 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 PLA2G2CQ5R387 149 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 ZNF529Q6P280 563 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 SEZ6L2Q6UXD5 910 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 FOXL2NBQ6ZUU3 175 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 TIPARPQ7Z3E1 657 aaKnown RBP12.22□□□□□ -0.45
RTN3-210ENST00000540798 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.22□□□□□ -0.45
RTN3-210ENST00000540798 OR11H7Q8NGC8 314 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 OR51A2Q8NGJ7 313 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 OR6M1Q8NGM8 313 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 ZFAND1Q8TCF1 268 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 NECAB3Q96P71 396 aaPredicted RBP12.22□□□□□ -0.45
RTN3-210ENST00000540798 MOB1AQ9H8S9 216 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 HPF1Q9NWY4 346 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 PAQR5Q9NXK6 330 aaPredicted RBP12.22□□□□□ -0.45
RTN3-210ENST00000540798 MRPL15Q9P015 296 aaKnown RBP12.22□□□□□ -0.45
RTN3-210ENST00000540798 MTFP1Q9UDX5 166 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 PADI1Q9ULC6 663 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 A0A1W2PPL8 197 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 LMX1BO60663 402 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 HPP00738 406 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 GABRA1P14867 456 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 PSMB1P20618 241 aaKnown RBP12.22□□□□□ -0.45
RTN3-210ENST00000540798 STOMP27105 288 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 HTR2CP28335 458 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 HTR2BP41595 481 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 MECP2P51608 486 aaKnown RBP12.22□□□□□ -0.45
RTN3-210ENST00000540798 C6orf15Q6UXA7 325 aaPredicted RBP12.22□□□□□ -0.45
RTN3-210ENST00000540798 NKAIN3Q8N8D7 197 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 CT55Q8WUE5 264 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 TMEM54Q969K7 222 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 LOXL4Q96JB6 756 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 SGCZQ96LD1 299 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 DDA1Q9BW61 102 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 PBOV1Q9GZY1 135 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 MED28Q9H204 178 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 EMC7Q9NPA0 242 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 CENPMQ9NSP4 180 aa12.22□□□□□ -0.45
RTN3-210ENST00000540798 MRPS18BQ9Y676 258 aaKnown RBP12.22□□□□□ -0.45
RTN3-210ENST00000540798 MASP2O00187 686 aa12.21□□□□□ -0.45
RTN3-210ENST00000540798 P2RY10O00398 339 aa12.21□□□□□ -0.45
RTN3-210ENST00000540798 CBR3O75828 277 aa12.21□□□□□ -0.45
RTN3-210ENST00000540798 B3GALT5-AS1P59052 145 aa12.21□□□□□ -0.45
RTN3-210ENST00000540798 C10orf128Q5T292 105 aa12.21□□□□□ -0.45
RTN3-210ENST00000540798 TMEM156Q8N614 296 aa12.21□□□□□ -0.45
RTN3-210ENST00000540798 PTX4Q96A99 478 aa12.21□□□□□ -0.45
RTN3-210ENST00000540798 AIFM2Q9BRQ8 373 aa12.21□□□□□ -0.45
RTN3-210ENST00000540798 KCNK15Q9H427 330 aa12.21□□□□□ -0.45
RTN3-210ENST00000540798 NCKAP5O14513 1909 aa12.21□□□□□ -0.45
RTN3-210ENST00000540798 ZNF878C9JN71 531 aa12.21□□□□□ -0.46
RTN3-210ENST00000540798 LINC01387J3KSC0 135 aa12.21□□□□□ -0.46
RTN3-210ENST00000540798 EIF1BO60739 113 aaKnown RBP12.21□□□□□ -0.46
RTN3-210ENST00000540798 IL32P24001 234 aa12.21□□□□□ -0.46
RTN3-210ENST00000540798 DNASE1L1P49184 302 aa12.21□□□□□ -0.46
RTN3-210ENST00000540798 PSMA6P60900 246 aaKnown RBP12.21□□□□□ -0.46
RTN3-210ENST00000540798 SSPNQ14714 243 aa12.21□□□□□ -0.46
RTN3-210ENST00000540798 ST3GAL2Q16842 350 aa12.21□□□□□ -0.46
RTN3-210ENST00000540798 FGD2Q7Z6J4 655 aa12.21□□□□□ -0.46
RTN3-210ENST00000540798 PIAS4Q8N2W9 510 aaPredicted RBP12.21□□□□□ -0.46
RTN3-210ENST00000540798 UQCC2Q9BRT2 126 aa12.21□□□□□ -0.46
RTN3-210ENST00000540798 DIABLOQ9NR28 239 aa12.21□□□□□ -0.46
RTN3-210ENST00000540798 PCDHGA5Q9Y5G8 931 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms