RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 MSMPQ1L6U9 139 aa8.84□□□□□ -0.99
CDCA3-208ENST00000540683 SPATA46Q5T0L3 261 aa8.84□□□□□ -0.99
CDCA3-208ENST00000540683 C1orf94Q6P1W5 598 aa8.84□□□□□ -0.99
CDCA3-208ENST00000540683 LEG1Q6P5S2 330 aa8.84□□□□□ -0.99
CDCA3-208ENST00000540683 FBXW12Q6X9E4 464 aa8.84□□□□□ -0.99
CDCA3-208ENST00000540683 RFPL4BQ6ZWI9 263 aa8.84□□□□□ -0.99
CDCA3-208ENST00000540683 LSRQ86X29 649 aaPredicted RBP8.84□□□□□ -0.99
CDCA3-208ENST00000540683 OR2T4Q8NH00 348 aa8.84□□□□□ -0.99
CDCA3-208ENST00000540683 YIPF5Q969M3 257 aa8.84□□□□□ -0.99
CDCA3-208ENST00000540683 NSL1Q96IY1 281 aa8.84□□□□□ -0.99
CDCA3-208ENST00000540683 NUAK2Q9H093 628 aa8.84□□□□□ -0.99
CDCA3-208ENST00000540683 YY1AP1Q9H869 796 aa8.84□□□□□ -0.99
CDCA3-208ENST00000540683 EMC7Q9NPA0 242 aa8.84□□□□□ -0.99
CDCA3-208ENST00000540683 CD300AQ9UGN4 299 aa8.84□□□□□ -0.99
CDCA3-208ENST00000540683 KLHL21Q9UJP4 597 aa8.84□□□□□ -0.99
CDCA3-208ENST00000540683 PURGQ9UJV8 347 aaKnown RBP8.84□□□□□ -0.99
CDCA3-208ENST00000540683 PRPF19Q9UMS4 504 aaKnown RBP8.84□□□□□ -0.99
CDCA3-208ENST00000540683 ISPDA4D126 451 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 TNFRSF11BO00300 401 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 NCR1O76036 304 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 CCNB2O95067 398 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 MPZL1O95297 269 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 FSTL3O95633 263 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 APOC1P02654 83 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 SEMG1P04279 462 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 IRF2P14316 349 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 GSSP48637 474 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 TPTEP56180 551 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 ERVS71-1P61550 626 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 MVKQ03426 396 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 PSG7Q13046 419 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 KCNJ8Q15842 424 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 SNCBQ16143 134 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 TMEM155Q4W5P6 130 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 DCAF12L2Q5VW00 463 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 FAHD2BQ6P2I3 314 aaPredicted RBP8.83□□□□□ -1
CDCA3-208ENST00000540683 ZNF620Q6ZNG0 422 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 RINLQ6ZS11 566 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 USP43Q70EL4 1123 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 ZBTB46Q86UZ6 589 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 DHFR2Q86XF0 187 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 CLDN22Q8N7P3 220 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 CCDC197Q8NCU1 140 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 OR2Z1Q8NG97 314 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 NANPQ8TBE9 248 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 ERGIC1Q969X5 290 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 CMBLQ96DG6 245 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 FAHD2AQ96GK7 314 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 PITX2Q99697 317 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 ATF6BQ99941 703 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 OPA3Q9H6K4 179 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 NARFLQ9H6Q4 476 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 REEP1Q9H902 201 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 TREM2Q9NZC2 230 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 B9D1Q9UPM9 204 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 PPP1R3CQ9UQK1 317 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 WIPI2Q9Y4P8 454 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 NPTNQ9Y639 398 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 CDH10Q9Y6N8 788 aa8.83□□□□□ -1
CDCA3-208ENST00000540683 B2RBV5 119 aa8.82□□□□□ -1
CDCA3-208ENST00000540683 UBOX5O94941 541 aa8.82□□□□□ -1
CDCA3-208ENST00000540683 DIRAS1O95057 198 aa8.82□□□□□ -1
CDCA3-208ENST00000540683 PPP1R3DO95685 299 aa8.82□□□□□ -1
CDCA3-208ENST00000540683 FAM107AO95990 144 aa8.82□□□□□ -1
CDCA3-208ENST00000540683 NGFP01138 241 aa8.82□□□□□ -1
CDCA3-208ENST00000540683 IGHV2-5P01817 119 aa8.82□□□□□ -1
CDCA3-208ENST00000540683 FPR2P25090 351 aa8.82□□□□□ -1
CDCA3-208ENST00000540683 MPV17P39210 176 aa8.82□□□□□ -1
CDCA3-208ENST00000540683 SLC15A1P46059 708 aa8.82□□□□□ -1
CDCA3-208ENST00000540683 LMO4P61968 165 aa8.82□□□□□ -1
CDCA3-208ENST00000540683 HIST1H3AP68431 136 aa8.82□□□□□ -1
CDCA3-208ENST00000540683 TRIM25Q14258 630 aaKnown RBP8.82□□□□□ -1
CDCA3-208ENST00000540683 SEC23BQ15437 767 aa8.82□□□□□ -1
CDCA3-208ENST00000540683 HIST2H3PS2Q5TEC6 136 aa8.82□□□□□ -1
CDCA3-208ENST00000540683 HIST2H3AQ71DI3 136 aa8.82□□□□□ -1
CDCA3-208ENST00000540683 MEX3DQ86XN8 651 aaKnown RBP8.82□□□□□ -1
CDCA3-208ENST00000540683 FAM86B1Q8N7N1 296 aa8.82□□□□□ -1
CDCA3-208ENST00000540683 CELF2-AS1Q8N7Q2 184 aa8.82□□□□□ -1
CDCA3-208ENST00000540683 ATG16L2Q8NAA4 619 aa8.82□□□□□ -1
CDCA3-208ENST00000540683 PROKR2Q8NFJ6 384 aa8.82□□□□□ -1
CDCA3-208ENST00000540683 OR8G5Q8NG78 346 aa8.82□□□□□ -1
CDCA3-208ENST00000540683 PLEKHA8Q96JA3 519 aa8.82□□□□□ -1
CDCA3-208ENST00000540683 FUZQ9BT04 418 aa8.82□□□□□ -1
CDCA3-208ENST00000540683 SUCNR1Q9BXA5 334 aa8.82□□□□□ -1
CDCA3-208ENST00000540683 C1orf21Q9H246 121 aa8.82□□□□□ -1
CDCA3-208ENST00000540683 SRA1Q9HD15 236 aaKnown RBP8.82□□□□□ -1
CDCA3-208ENST00000540683 TRIM36Q9NQ86 728 aa8.82□□□□□ -1
CDCA3-208ENST00000540683 RPRD1BQ9NQG5 326 aaKnown RBP8.82□□□□□ -1
CDCA3-208ENST00000540683 TMEM106BQ9NUM4 274 aa8.82□□□□□ -1
CDCA3-208ENST00000540683 IL20Q9NYY1 176 aa8.82□□□□□ -1
CDCA3-208ENST00000540683 V9GYQ6 96 aa8.82□□□□□ -1
CDCA3-208ENST00000540683 STAB1Q9NY15 2570 aa8.82□□□□□ -1
CDCA3-208ENST00000540683 FBN1P35555 2871 aaKnown RBP8.82□□□□□ -1
CDCA3-208ENST00000540683 IGLV1-36A0A0B4J1U3 117 aa8.81□□□□□ -1
CDCA3-208ENST00000540683 ZSCAN5BA6NJL1 495 aa8.81□□□□□ -1
CDCA3-208ENST00000540683 RIIAD1A6NNX1 92 aa8.81□□□□□ -1
CDCA3-208ENST00000540683 RAP2AP10114 183 aa8.81□□□□□ -1
CDCA3-208ENST00000540683 HIST1H1CP16403 213 aaKnown RBP8.81□□□□□ -1
CDCA3-208ENST00000540683 ZNF26P17031 533 aaPredicted RBP8.81□□□□□ -1
CDCA3-208ENST00000540683 ZNF3P17036 446 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms