RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 PABPC1L2AQ5JQF8 200 aa9.16□□□□□ -0.94
VPS33A-204ENST00000540669 ELFN2Q5R3F8 820 aa9.16□□□□□ -0.94
VPS33A-204ENST00000540669 UBE2UQ5VVX9 321 aa9.16□□□□□ -0.94
VPS33A-204ENST00000540669 ZNF322Q6U7Q0 402 aaPredicted RBP9.16□□□□□ -0.94
VPS33A-204ENST00000540669 ZNF679Q8IYX0 411 aa9.16□□□□□ -0.94
VPS33A-204ENST00000540669 SPARTQ8N0X7 666 aa9.16□□□□□ -0.94
VPS33A-204ENST00000540669 NANOGP1Q8N7R0 232 aa9.16□□□□□ -0.94
VPS33A-204ENST00000540669 NANOS1Q8WY41 292 aaKnown RBP9.16□□□□□ -0.94
VPS33A-204ENST00000540669 MYDGFQ969H8 173 aa9.16□□□□□ -0.94
VPS33A-204ENST00000540669 SLAMF6Q96DU3 332 aa9.16□□□□□ -0.94
VPS33A-204ENST00000540669 PELI1Q96FA3 418 aa9.16□□□□□ -0.94
VPS33A-204ENST00000540669 POM121L2Q96KW2 1035 aa9.16□□□□□ -0.94
VPS33A-204ENST00000540669 ATF6BQ99941 703 aa9.16□□□□□ -0.94
VPS33A-204ENST00000540669 ALG8Q9BVK2 526 aa9.16□□□□□ -0.94
VPS33A-204ENST00000540669 SLCO1C1Q9NYB5 712 aa9.16□□□□□ -0.94
VPS33A-204ENST00000540669 CLEC2DQ9UHP7 191 aa9.16□□□□□ -0.94
VPS33A-204ENST00000540669 CAB39Q9Y376 341 aaPredicted RBP9.16□□□□□ -0.94
VPS33A-204ENST00000540669 LRP12Q9Y561 859 aa9.16□□□□□ -0.94
VPS33A-204ENST00000540669 TIMM10BQ9Y5J6 103 aa9.16□□□□□ -0.94
VPS33A-204ENST00000540669 UNC79Q9P2D8 2635 aa9.16□□□□□ -0.94
VPS33A-204ENST00000540669 LOC100509620A0A075B734 347 aa9.15□□□□□ -0.94
VPS33A-204ENST00000540669 IGHV1-18A0A0C4DH31 117 aa9.15□□□□□ -0.94
VPS33A-204ENST00000540669 CIB4A0PJX0 185 aa9.15□□□□□ -0.94
VPS33A-204ENST00000540669 ZNF670-ZNF695F2Z2N8 137 aa9.15□□□□□ -0.94
VPS33A-204ENST00000540669 C19orf84I3L1E1 186 aa9.15□□□□□ -0.94
VPS33A-204ENST00000540669 J3QW42 95 aa9.15□□□□□ -0.94
VPS33A-204ENST00000540669 SIAH2O43255 324 aa9.15□□□□□ -0.94
VPS33A-204ENST00000540669 DOK2O60496 412 aa9.15□□□□□ -0.94
VPS33A-204ENST00000540669 HLA-DQA2P01906 255 aa9.15□□□□□ -0.94
VPS33A-204ENST00000540669 CAPZA2P47755 286 aa9.15□□□□□ -0.94
VPS33A-204ENST00000540669 MMP16P51512 607 aa9.15□□□□□ -0.94
VPS33A-204ENST00000540669 RAB1AP62820 205 aa9.15□□□□□ -0.94
VPS33A-204ENST00000540669 TUBA1BP68363 451 aa9.15□□□□□ -0.94
VPS33A-204ENST00000540669 TUBA4AP68366 448 aa9.15□□□□□ -0.94
VPS33A-204ENST00000540669 BDH1Q02338 343 aa9.15□□□□□ -0.94
VPS33A-204ENST00000540669 ECH1Q13011 328 aa9.15□□□□□ -0.94
VPS33A-204ENST00000540669 EIF2B1Q14232 305 aaKnown RBP9.15□□□□□ -0.94
VPS33A-204ENST00000540669 ZNF774Q6NX45 483 aa9.15□□□□□ -0.94
VPS33A-204ENST00000540669 Q6ZSR3 168 aa9.15□□□□□ -0.94
VPS33A-204ENST00000540669 TUBA1AQ71U36 451 aa9.15□□□□□ -0.94
VPS33A-204ENST00000540669 LRRC18Q8N456 261 aa9.15□□□□□ -0.94
VPS33A-204ENST00000540669 IL17RDQ8NFM7 739 aa9.15□□□□□ -0.94
VPS33A-204ENST00000540669 OR10H4Q8NGA5 316 aa9.15□□□□□ -0.94
VPS33A-204ENST00000540669 OR1F12Q8NHA8 337 aa9.15□□□□□ -0.94
VPS33A-204ENST00000540669 AKR7LQ8NHP1 331 aa9.15□□□□□ -0.94
VPS33A-204ENST00000540669 HSD17B8Q92506 261 aa9.15□□□□□ -0.94
VPS33A-204ENST00000540669 PSMG3-AS1Q96PY0 264 aa9.15□□□□□ -0.94
VPS33A-204ENST00000540669 NIPAL2Q9H841 368 aa9.15□□□□□ -0.94
VPS33A-204ENST00000540669 ACOT13Q9NPJ3 140 aa9.15□□□□□ -0.94
VPS33A-204ENST00000540669 ACOXLQ9NUZ1 547 aa9.15□□□□□ -0.94
VPS33A-204ENST00000540669 FAM206AQ9NX38 181 aa9.15□□□□□ -0.94
VPS33A-204ENST00000540669 ST6GALNAC2Q9UJ37 374 aa9.15□□□□□ -0.94
VPS33A-204ENST00000540669 LAMP5Q9UJQ1 280 aa9.15□□□□□ -0.94
VPS33A-204ENST00000540669 ABCA4P78363 2273 aa9.15□□□□□ -0.95
VPS33A-204ENST00000540669 ICE1Q9Y2F5 2266 aa9.15□□□□□ -0.95
VPS33A-204ENST00000540669 CELSR2Q9HCU4 2923 aa9.15□□□□□ -0.95
VPS33A-204ENST00000540669 TMCC2O75069 709 aa9.14□□□□□ -0.95
VPS33A-204ENST00000540669 CELA3BP08861 270 aa9.14□□□□□ -0.95
VPS33A-204ENST00000540669 ACSM4P0C7M7 580 aa9.14□□□□□ -0.95
VPS33A-204ENST00000540669 CECR9P0C854 216 aa9.14□□□□□ -0.95
VPS33A-204ENST00000540669 ZNF35P13682 527 aa9.14□□□□□ -0.95
VPS33A-204ENST00000540669 JUNBP17275 347 aaPredicted RBP9.14□□□□□ -0.95
VPS33A-204ENST00000540669 GUCA1AP43080 201 aaPredicted RBP9.14□□□□□ -0.95
VPS33A-204ENST00000540669 TGM4P49221 684 aa9.14□□□□□ -0.95
VPS33A-204ENST00000540669 GUCA2AQ02747 115 aa9.14□□□□□ -0.95
VPS33A-204ENST00000540669 EMX1Q04741 257 aaPredicted RBP9.14□□□□□ -0.95
VPS33A-204ENST00000540669 PPA1Q15181 289 aa9.14□□□□□ -0.95
VPS33A-204ENST00000540669 OR2G6Q5TZ20 316 aa9.14□□□□□ -0.95
VPS33A-204ENST00000540669 TMEM53Q6P2H8 277 aa9.14□□□□□ -0.95
VPS33A-204ENST00000540669 KCTD18Q6PI47 426 aaPredicted RBP9.14□□□□□ -0.95
VPS33A-204ENST00000540669 LRRN1Q6UXK5 716 aa9.14□□□□□ -0.95
VPS33A-204ENST00000540669 PLEKHG7Q6ZR37 379 aa9.14□□□□□ -0.95
VPS33A-204ENST00000540669 KCTD20Q7Z5Y7 419 aa9.14□□□□□ -0.95
VPS33A-204ENST00000540669 LHFPL3Q86UP9 236 aa9.14□□□□□ -0.95
VPS33A-204ENST00000540669 STX19Q8N4C7 294 aa9.14□□□□□ -0.95
VPS33A-204ENST00000540669 HAVCR2Q8TDQ0 301 aa9.14□□□□□ -0.95
VPS33A-204ENST00000540669 RORBQ92753 470 aa9.14□□□□□ -0.95
VPS33A-204ENST00000540669 MUL1Q969V5 352 aa9.14□□□□□ -0.95
VPS33A-204ENST00000540669 WFIKKN1Q96NZ8 548 aa9.14□□□□□ -0.95
VPS33A-204ENST00000540669 DCLRE1CQ96SD1 692 aaKnown RBP9.14□□□□□ -0.95
VPS33A-204ENST00000540669 TBX5Q99593 518 aa9.14□□□□□ -0.95
VPS33A-204ENST00000540669 DOK1Q99704 481 aa9.14□□□□□ -0.95
VPS33A-204ENST00000540669 KCNJ15Q99712 375 aa9.14□□□□□ -0.95
VPS33A-204ENST00000540669 TMEM204Q9BSN7 226 aa9.14□□□□□ -0.95
VPS33A-204ENST00000540669 C1QTNF5Q9BXJ0 243 aa9.14□□□□□ -0.95
VPS33A-204ENST00000540669 ISG20L2Q9H9L3 353 aaKnown RBP9.14□□□□□ -0.95
VPS33A-204ENST00000540669 ISYNA1Q9NPH2 558 aa9.14□□□□□ -0.95
VPS33A-204ENST00000540669 PLEK2Q9NYT0 353 aa9.14□□□□□ -0.95
VPS33A-204ENST00000540669 POLR1DQ9Y2S0 133 aa9.14□□□□□ -0.95
VPS33A-204ENST00000540669 LRBAP50851 2863 aa9.13□□□□□ -0.95
VPS33A-204ENST00000540669 A0A087WXM4 84 aa9.13□□□□□ -0.95
VPS33A-204ENST00000540669 DAPL1A0PJW8 107 aa9.13□□□□□ -0.95
VPS33A-204ENST00000540669 METTL15A6NJ78 407 aa9.13□□□□□ -0.95
VPS33A-204ENST00000540669 DEFB108AA8MXU0 73 aa9.13□□□□□ -0.95
VPS33A-204ENST00000540669 PTGES3LE9PB15 166 aa9.13□□□□□ -0.95
VPS33A-204ENST00000540669 E9PI62 339 aa9.13□□□□□ -0.95
VPS33A-204ENST00000540669 MAGEB4O15481 346 aaPredicted RBP9.13□□□□□ -0.95
VPS33A-204ENST00000540669 PNPP00491 289 aa9.13□□□□□ -0.95
VPS33A-204ENST00000540669 CD1AP06126 327 aa9.13□□□□□ -0.95
VPS33A-204ENST00000540669 DBHP09172 617 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms