RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 IGFBP3P17936 291 aaPredicted RBP18.17■□□□□ 0.5
TMEM260-203ENST00000539559 IL11P20809 199 aa18.17■□□□□ 0.5
TMEM260-203ENST00000539559 HRH1P35367 487 aa18.17■□□□□ 0.5
TMEM260-203ENST00000539559 IGLV3-21P80748 117 aaPredicted RBP18.17■□□□□ 0.5
TMEM260-203ENST00000539559 FMODQ06828 376 aa18.17■□□□□ 0.5
TMEM260-203ENST00000539559 ZNF345Q14585 488 aa18.17■□□□□ 0.5
TMEM260-203ENST00000539559 INPP5JQ15735 1006 aaPredicted RBP18.17■□□□□ 0.5
TMEM260-203ENST00000539559 FDX2Q6P4F2 183 aa18.17■□□□□ 0.5
TMEM260-203ENST00000539559 HAGHLQ6PII5 290 aaPredicted RBP18.17■□□□□ 0.5
TMEM260-203ENST00000539559 BHLHE23Q8NDY6 225 aa18.17■□□□□ 0.5
TMEM260-203ENST00000539559 TSLPQ969D9 159 aa18.17■□□□□ 0.5
TMEM260-203ENST00000539559 A0A0B4J2A0 478 aa18.16■□□□□ 0.5
TMEM260-203ENST00000539559 CD74P04233 296 aa18.16■□□□□ 0.5
TMEM260-203ENST00000539559 CFPP27918 469 aa18.16■□□□□ 0.5
TMEM260-203ENST00000539559 SSBP1Q04837 148 aaKnown RBP18.16■□□□□ 0.5
TMEM260-203ENST00000539559 CCINQ13939 588 aa18.16■□□□□ 0.5
TMEM260-203ENST00000539559 RNF144BQ7Z419 303 aa18.16■□□□□ 0.5
TMEM260-203ENST00000539559 WDFY1Q8IWB7 410 aa18.16■□□□□ 0.5
TMEM260-203ENST00000539559 THAP6Q8TBB0 222 aa18.16■□□□□ 0.5
TMEM260-203ENST00000539559 SHPKQ9UHJ6 478 aa18.16■□□□□ 0.5
TMEM260-203ENST00000539559 IGLV1-36A0A0B4J1U3 117 aa18.16■□□□□ 0.5
TMEM260-203ENST00000539559 PHYHO14832 338 aa18.16■□□□□ 0.5
TMEM260-203ENST00000539559 GNB3P16520 340 aa18.16■□□□□ 0.5
TMEM260-203ENST00000539559 GABRG2P18507 467 aa18.16■□□□□ 0.5
TMEM260-203ENST00000539559 INO80EQ8NBZ0 244 aaPredicted RBP18.16■□□□□ 0.5
TMEM260-203ENST00000539559 PTPMT1Q8WUK0 201 aaPredicted RBP18.16■□□□□ 0.5
TMEM260-203ENST00000539559 PIGMQ9H3S5 423 aa18.16■□□□□ 0.5
TMEM260-203ENST00000539559 FN3KRPQ9HA64 309 aa18.16■□□□□ 0.5
TMEM260-203ENST00000539559 SLCO1B1Q9Y6L6 691 aa18.16■□□□□ 0.5
TMEM260-203ENST00000539559 SULT1C2O00338 296 aa18.16■□□□□ 0.5
TMEM260-203ENST00000539559 STK17BO94768 372 aa18.16■□□□□ 0.5
TMEM260-203ENST00000539559 RPL27P61353 136 aaKnown RBP18.16■□□□□ 0.5
TMEM260-203ENST00000539559 SLC25A42Q86VD7 318 aa18.16■□□□□ 0.5
TMEM260-203ENST00000539559 OR2I1PQ8NGU4 316 aa18.16■□□□□ 0.5
TMEM260-203ENST00000539559 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.16■□□□□ 0.5
TMEM260-203ENST00000539559 TMED6Q8WW62 240 aa18.16■□□□□ 0.5
TMEM260-203ENST00000539559 EDAQ92838 391 aa18.16■□□□□ 0.5
TMEM260-203ENST00000539559 SPACA5Q96QH8 159 aa18.16■□□□□ 0.5
TMEM260-203ENST00000539559 ADAM19Q9H013 955 aa18.16■□□□□ 0.5
TMEM260-203ENST00000539559 CNTD2Q9H8S5 307 aa18.16■□□□□ 0.5
TMEM260-203ENST00000539559 GDF2Q9UK05 429 aaPredicted RBP18.16■□□□□ 0.5
TMEM260-203ENST00000539559 ATXN7L1Q9ULK2 861 aaPredicted RBP18.16■□□□□ 0.5
TMEM260-203ENST00000539559 CSAG2Q9Y5P2 127 aa18.16■□□□□ 0.5
TMEM260-203ENST00000539559 LDLRAD4O15165 306 aa18.15■□□□□ 0.5
TMEM260-203ENST00000539559 IL33O95760 270 aa18.15■□□□□ 0.5
TMEM260-203ENST00000539559 TNFP01375 233 aa18.15■□□□□ 0.5
TMEM260-203ENST00000539559 PMP2P02689 132 aa18.15■□□□□ 0.5
TMEM260-203ENST00000539559 EIF1AXP47813 144 aaKnown RBP18.15■□□□□ 0.5
TMEM260-203ENST00000539559 SLC37A1P57057 533 aa18.15■□□□□ 0.5
TMEM260-203ENST00000539559 HFEQ30201 348 aa18.15■□□□□ 0.5
TMEM260-203ENST00000539559 PRSS58Q8IYP2 241 aa18.15■□□□□ 0.5
TMEM260-203ENST00000539559 OR5AP2Q8NGF4 316 aa18.15■□□□□ 0.5
TMEM260-203ENST00000539559 ELP5Q8TE02 316 aa18.15■□□□□ 0.5
TMEM260-203ENST00000539559 CPNE2Q96FN4 548 aaPredicted RBP18.15■□□□□ 0.5
TMEM260-203ENST00000539559 TLNRD1Q9H1K6 362 aa18.15■□□□□ 0.5
TMEM260-203ENST00000539559 SCPEP1Q9HB40 452 aa18.15■□□□□ 0.5
TMEM260-203ENST00000539559 CENPMQ9NSP4 180 aa18.15■□□□□ 0.5
TMEM260-203ENST00000539559 ZNF98A6NK75 572 aa18.15■□□□□ 0.5
TMEM260-203ENST00000539559 TNFRSF10CO14798 259 aa18.15■□□□□ 0.5
TMEM260-203ENST00000539559 ZNF208O43345 1280 aa18.15■□□□□ 0.5
TMEM260-203ENST00000539559 VWA2Q5GFL6 755 aa18.15■□□□□ 0.5
TMEM260-203ENST00000539559 ZFP82Q8N141 532 aa18.15■□□□□ 0.5
TMEM260-203ENST00000539559 GTPBP8Q8N3Z3 284 aaPredicted RBP18.15■□□□□ 0.5
TMEM260-203ENST00000539559 GPBAR1Q8TDU6 330 aa18.15■□□□□ 0.5
TMEM260-203ENST00000539559 GPR119Q8TDV5 335 aa18.15■□□□□ 0.5
TMEM260-203ENST00000539559 C2CD4CQ8TF44 421 aa18.15■□□□□ 0.5
TMEM260-203ENST00000539559 DCUN1D4Q92564 292 aa18.15■□□□□ 0.5
TMEM260-203ENST00000539559 ZNF587Q96SQ5 575 aaPredicted RBP18.15■□□□□ 0.5
TMEM260-203ENST00000539559 PTGES2Q9H7Z7 377 aa18.15■□□□□ 0.5
TMEM260-203ENST00000539559 PRODH2Q9UF12 536 aa18.15■□□□□ 0.5
TMEM260-203ENST00000539559 F8W036 122 aa18.14■□□□□ 0.49
TMEM260-203ENST00000539559 RAB27BO00194 218 aa18.14■□□□□ 0.49
TMEM260-203ENST00000539559 AKT2P31751 481 aa18.14■□□□□ 0.49
TMEM260-203ENST00000539559 SERPINF1P36955 418 aa18.14■□□□□ 0.49
TMEM260-203ENST00000539559 OR1D4P47884 311 aa18.14■□□□□ 0.49
TMEM260-203ENST00000539559 BLOC1S1P78537 153 aa18.14■□□□□ 0.49
TMEM260-203ENST00000539559 DMRTC1Q5HYR2 192 aa18.14■□□□□ 0.49
TMEM260-203ENST00000539559 TMEM200AQ86VY9 491 aa18.14■□□□□ 0.49
TMEM260-203ENST00000539559 ASB13Q8WXK3 278 aa18.14■□□□□ 0.49
TMEM260-203ENST00000539559 RRNAD1Q96FB5 475 aaKnown RBP18.14■□□□□ 0.49
TMEM260-203ENST00000539559 H0YIG0 161 aa18.14■□□□□ 0.49
TMEM260-203ENST00000539559 GNALP38405 381 aa18.14■□□□□ 0.49
TMEM260-203ENST00000539559 UNC119Q13432 240 aa18.14■□□□□ 0.49
TMEM260-203ENST00000539559 ZNF260Q3ZCT1 412 aa18.14■□□□□ 0.49
TMEM260-203ENST00000539559 PTCRAQ6ISU1 281 aaPredicted RBP18.14■□□□□ 0.49
TMEM260-203ENST00000539559 KCTD18Q6PI47 426 aaPredicted RBP18.14■□□□□ 0.49
TMEM260-203ENST00000539559 DCXRQ7Z4W1 244 aa18.14■□□□□ 0.49
TMEM260-203ENST00000539559 PAQR4Q8N4S7 273 aaPredicted RBP18.14■□□□□ 0.49
TMEM260-203ENST00000539559 OR52N4Q8NGI2 321 aa18.14■□□□□ 0.49
TMEM260-203ENST00000539559 ZNF519Q8TB69 540 aa18.14■□□□□ 0.49
TMEM260-203ENST00000539559 MARCH1Q8TCQ1 289 aa18.14■□□□□ 0.49
TMEM260-203ENST00000539559 ASB17Q8WXJ9 295 aa18.14■□□□□ 0.49
TMEM260-203ENST00000539559 FGGYQ96C11 551 aa18.14■□□□□ 0.49
TMEM260-203ENST00000539559 PHB2Q99623 299 aa18.14■□□□□ 0.49
TMEM260-203ENST00000539559 ESRP2Q9H6T0 727 aaKnown RBP18.14■□□□□ 0.49
TMEM260-203ENST00000539559 HHLA2Q9UM44 414 aa18.14■□□□□ 0.49
TMEM260-203ENST00000539559 FAM96BQ9Y3D0 163 aa18.14■□□□□ 0.49
TMEM260-203ENST00000539559 SHISA7A6NL88 538 aa18.13■□□□□ 0.49
TMEM260-203ENST00000539559 PI3P19957 117 aa18.13■□□□□ 0.49
TMEM260-203ENST00000539559 NPBWR1P48145 328 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms