RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 SETD7Q8WTS6 366 aaKnown RBP3.21□□□□□ -1.9
AC055720.1-201ENST00000539552 NTNG2Q96CW9 530 aa3.21□□□□□ -1.9
AC055720.1-201ENST00000539552 RNF145Q96MT1 663 aa3.21□□□□□ -1.9
AC055720.1-201ENST00000539552 LGMNQ99538 433 aa3.21□□□□□ -1.9
AC055720.1-201ENST00000539552 RBBP8Q99708 897 aa3.21□□□□□ -1.9
AC055720.1-201ENST00000539552 ZNF670Q9BS34 389 aa3.21□□□□□ -1.9
AC055720.1-201ENST00000539552 TRIM51Q9BSJ1 452 aa3.21□□□□□ -1.9
AC055720.1-201ENST00000539552 PAPOLGQ9BWT3 736 aaKnown RBP3.21□□□□□ -1.9
AC055720.1-201ENST00000539552 QTRT1Q9BXR0 403 aaKnown RBP3.21□□□□□ -1.9
AC055720.1-201ENST00000539552 NAA50Q9GZZ1 169 aaKnown RBP3.21□□□□□ -1.9
AC055720.1-201ENST00000539552 C3orf14Q9HBI5 128 aa3.21□□□□□ -1.9
AC055720.1-201ENST00000539552 RETNQ9HD89 108 aa3.21□□□□□ -1.9
AC055720.1-201ENST00000539552 PLCXD1Q9NUJ7 323 aa3.21□□□□□ -1.9
AC055720.1-201ENST00000539552 TMEM30AQ9NV96 361 aa3.21□□□□□ -1.9
AC055720.1-201ENST00000539552 NDE1Q9NXR1 346 aa3.21□□□□□ -1.9
AC055720.1-201ENST00000539552 VAPAQ9P0L0 249 aa3.21□□□□□ -1.9
AC055720.1-201ENST00000539552 CYB5R1Q9UHQ9 305 aa3.21□□□□□ -1.9
AC055720.1-201ENST00000539552 TMCO1Q9UM00 188 aa3.21□□□□□ -1.9
AC055720.1-201ENST00000539552 PPP1R3CQ9UQK1 317 aa3.21□□□□□ -1.9
AC055720.1-201ENST00000539552 RCL1Q9Y2P8 373 aaKnown RBP3.21□□□□□ -1.9
AC055720.1-201ENST00000539552 AP3M1Q9Y2T2 418 aa3.21□□□□□ -1.9
AC055720.1-201ENST00000539552 PRKDCP78527 4128 aaKnown RBP3.21□□□□□ -1.9
AC055720.1-201ENST00000539552 SIP14410 1827 aa3.21□□□□□ -1.9
AC055720.1-201ENST00000539552 AHCTF1Q8WYP5 2266 aa3.21□□□□□ -1.9
AC055720.1-201ENST00000539552 ICE1Q9Y2F5 2266 aa3.21□□□□□ -1.9
AC055720.1-201ENST00000539552 TENM1Q9UKZ4 2725 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 A0A0A6YYD5 115 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 CCL15-CCL14A0A0B4J2E2 113 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 TRBV4-1A0A0J9YWV2 114 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 A0A1B0GVT2 93 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 TCRBV9S1A1TA0A576 114 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 PSMB11A5LHX3 300 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 ERVV-1B6SEH8 477 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 TRDCB7Z8K6 153 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 TCP10L2B9ZVM9 353 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 TMEM238C9JI98 176 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 H7C0C1 242 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 hCG_2039718K7EN88 272 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 SULT1C2O00338 296 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 PPP1R2P9O14990 202 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 SLC31A1O15431 190 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 SOX15O60248 233 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 GLUD1P00367 558 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 OAS1P00973 400 aaKnown RBP3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 ORM1P02763 201 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 HMGN1P05114 100 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 RPS17P08708 135 aaKnown RBP3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 COX5BP10606 129 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 FGF3P11487 239 aaPredicted RBP3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 NQO1P15559 274 aaKnown RBP3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 ZP3P21754 424 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 CMA1P23946 247 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 ZFP36L2P47974 494 aaKnown RBP3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 ALDH3B2P48448 385 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 MNAT1P51948 309 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 RAP1GDS1P52306 607 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 OR2B8PP59922 312 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 ABCE1P61221 599 aaKnown RBP3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 BTG1P62324 171 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 SLC35B1P78383 322 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 CKAP4Q07065 602 aaKnown RBP3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 GPR17Q13304 367 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 MTF1Q14872 753 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 RAB35Q15286 201 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 ZNHIT3Q15649 155 aaPredicted RBP3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 CCL15Q16663 113 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 TRMT5Q32P41 509 aaKnown RBP3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 TIGITQ495A1 244 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 DCAF10Q5QP82 559 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 ATP1A1-AS1Q5TC04 95 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 AWAT2Q6E213 333 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 ASB18Q6ZVZ8 466 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 HIPK1Q86Z02 1210 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 ENTHD1Q8IYW4 607 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 C2orf73Q8N5S3 287 aaPredicted RBP3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 ATP6V0D2Q8N8Y2 350 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 LFNGQ8NES3 379 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 VN1R2Q8NFZ6 395 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 OR2T12Q8NG77 320 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 OR1S2Q8NGQ3 325 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 OR6K6Q8NGW6 343 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 ITFG1Q8TB96 612 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 ZPLD1Q8TCW7 415 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 OR8D1Q8WZ84 308 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 GTF3AQ92664 365 aaKnown RBP3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 MRPS31Q92665 395 aaKnown RBP3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 HGDQ93099 445 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 TOMM40LQ969M1 308 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 FAF2Q96CS3 445 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 WDR34Q96EX3 536 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 MBOAT7Q96N66 472 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 SERPINB12Q96P63 405 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 CIB1Q99828 191 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 BEX2Q9BXY8 128 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 ING2Q9H160 280 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 RNF41Q9H4P4 317 aaPredicted RBP3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 Q9HAA7 133 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 PELI2Q9HAT8 420 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 ZNF334Q9HCZ1 680 aaPredicted RBP3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 RHBDL2Q9NX52 303 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms