RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 TSPAN2O60636 221 aa8.65□□□□□ -1.02
CDH13-204ENST00000539548 ATG12O94817 140 aa8.65□□□□□ -1.02
CDH13-204ENST00000539548 WISP1O95388 367 aa8.65□□□□□ -1.02
CDH13-204ENST00000539548 NUDT14O95848 222 aa8.65□□□□□ -1.02
CDH13-204ENST00000539548 DDAH2O95865 285 aa8.65□□□□□ -1.02
CDH13-204ENST00000539548 GABRG2P18507 467 aa8.65□□□□□ -1.02
CDH13-204ENST00000539548 DRD1P21728 446 aa8.65□□□□□ -1.02
CDH13-204ENST00000539548 IL12BP29460 328 aa8.65□□□□□ -1.02
CDH13-204ENST00000539548 CCR5P51681 352 aa8.65□□□□□ -1.02
CDH13-204ENST00000539548 PRKXP51817 358 aa8.65□□□□□ -1.02
CDH13-204ENST00000539548 SIGLEC14Q08ET2 396 aa8.65□□□□□ -1.02
CDH13-204ENST00000539548 PCK2Q16822 640 aa8.65□□□□□ -1.02
CDH13-204ENST00000539548 LRRC37A5PQ49AS3 106 aa8.65□□□□□ -1.02
CDH13-204ENST00000539548 CCDC157Q569K6 752 aa8.65□□□□□ -1.02
CDH13-204ENST00000539548 BEX5Q5H9J7 111 aa8.65□□□□□ -1.02
CDH13-204ENST00000539548 PRAMEF17Q5VTA0 474 aa8.65□□□□□ -1.02
CDH13-204ENST00000539548 C1orf140Q5VVS0 124 aa8.65□□□□□ -1.02
CDH13-204ENST00000539548 DEGS2Q6QHC5 323 aa8.65□□□□□ -1.02
CDH13-204ENST00000539548 LINC00518Q8N0U6 118 aa8.65□□□□□ -1.02
CDH13-204ENST00000539548 INO80EQ8NBZ0 244 aaPredicted RBP8.65□□□□□ -1.02
CDH13-204ENST00000539548 ACBD4Q8NC06 268 aa8.65□□□□□ -1.02
CDH13-204ENST00000539548 OR4D6Q8NGJ1 314 aa8.65□□□□□ -1.02
CDH13-204ENST00000539548 GPR27Q9NS67 375 aa8.65□□□□□ -1.02
CDH13-204ENST00000539548 MYEF2Q9P2K5 600 aaKnown RBP8.65□□□□□ -1.02
CDH13-204ENST00000539548 PLEKHA6Q9Y2H5 1048 aa8.65□□□□□ -1.02
CDH13-204ENST00000539548 FREM3P0C091 2139 aa8.65□□□□□ -1.02
CDH13-204ENST00000539548 TCRBV21S2A2A0A5A6 115 aa8.65□□□□□ -1.03
CDH13-204ENST00000539548 C17orf51A8MQB3 221 aa8.65□□□□□ -1.03
CDH13-204ENST00000539548 TMEM150CB9EJG8 249 aa8.65□□□□□ -1.03
CDH13-204ENST00000539548 TO15178 435 aa8.65□□□□□ -1.03
CDH13-204ENST00000539548 MPZL1O95297 269 aa8.65□□□□□ -1.03
CDH13-204ENST00000539548 CSN2P05814 226 aa8.65□□□□□ -1.03
CDH13-204ENST00000539548 THEGLP0DJG4 465 aa8.65□□□□□ -1.03
CDH13-204ENST00000539548 ZNF823P16415 610 aa8.65□□□□□ -1.03
CDH13-204ENST00000539548 PRKACAP17612 351 aa8.65□□□□□ -1.03
CDH13-204ENST00000539548 CAPZBP47756 277 aa8.65□□□□□ -1.03
CDH13-204ENST00000539548 IL13RA1P78552 427 aa8.65□□□□□ -1.03
CDH13-204ENST00000539548 ZNF813Q6ZN06 617 aa8.65□□□□□ -1.03
CDH13-204ENST00000539548 TRAPPC6BQ86SZ2 158 aa8.65□□□□□ -1.03
CDH13-204ENST00000539548 PAQR4Q8N4S7 273 aaPredicted RBP8.65□□□□□ -1.03
CDH13-204ENST00000539548 SLC26A10Q8NG04 563 aa8.65□□□□□ -1.03
CDH13-204ENST00000539548 FAM46BQ96A09 425 aa8.65□□□□□ -1.03
CDH13-204ENST00000539548 MKL2Q9ULH7 1088 aa8.65□□□□□ -1.03
CDH13-204ENST00000539548 PRELID3BQ9Y3B1 194 aa8.65□□□□□ -1.03
CDH13-204ENST00000539548 COL5A1P20908 1838 aaPredicted RBP8.65□□□□□ -1.03
CDH13-204ENST00000539548 IGKV3D-11A0A0A0MRZ8 115 aa8.64□□□□□ -1.03
CDH13-204ENST00000539548 TMEM269A0A1B0GVZ9 245 aa8.64□□□□□ -1.03
CDH13-204ENST00000539548 TMEM218A2RU14 115 aa8.64□□□□□ -1.03
CDH13-204ENST00000539548 F5H0A9 414 aaPredicted RBP8.64□□□□□ -1.03
CDH13-204ENST00000539548 F8VVB4 439 aa8.64□□□□□ -1.03
CDH13-204ENST00000539548 F8VWA3 439 aa8.64□□□□□ -1.03
CDH13-204ENST00000539548 SMAD9O15198 467 aaKnown RBP8.64□□□□□ -1.03
CDH13-204ENST00000539548 EFSO43281 561 aa8.64□□□□□ -1.03
CDH13-204ENST00000539548 LMX1BO60663 402 aa8.64□□□□□ -1.03
CDH13-204ENST00000539548 STK17BO94768 372 aa8.64□□□□□ -1.03
CDH13-204ENST00000539548 DUS4LO95620 317 aaKnown RBP8.64□□□□□ -1.03
CDH13-204ENST00000539548 DCNP07585 359 aaKnown RBP8.64□□□□□ -1.03
CDH13-204ENST00000539548 LIPCP11150 499 aa8.64□□□□□ -1.03
CDH13-204ENST00000539548 HSD11B1P28845 292 aa8.64□□□□□ -1.03
CDH13-204ENST00000539548 GSK3AP49840 483 aa8.64□□□□□ -1.03
CDH13-204ENST00000539548 BLKP51451 505 aa8.64□□□□□ -1.03
CDH13-204ENST00000539548 ARHGDIBP52566 201 aa8.64□□□□□ -1.03
CDH13-204ENST00000539548 SLC26A5P58743 744 aa8.64□□□□□ -1.03
CDH13-204ENST00000539548 QRFPP83859 136 aa8.64□□□□□ -1.03
CDH13-204ENST00000539548 ATXN7L3Q14CW9 347 aaPredicted RBP8.64□□□□□ -1.03
CDH13-204ENST00000539548 C5orf46Q6UWT4 87 aa8.64□□□□□ -1.03
CDH13-204ENST00000539548 ARMC10Q8N2F6 343 aa8.64□□□□□ -1.03
CDH13-204ENST00000539548 DTWD2Q8NBA8 298 aa8.64□□□□□ -1.03
CDH13-204ENST00000539548 OR1S2Q8NGQ3 325 aa8.64□□□□□ -1.03
CDH13-204ENST00000539548 STOML3Q8TAV4 291 aa8.64□□□□□ -1.03
CDH13-204ENST00000539548 GPR119Q8TDV5 335 aa8.64□□□□□ -1.03
CDH13-204ENST00000539548 ST7LQ8TDW4 575 aa8.64□□□□□ -1.03
CDH13-204ENST00000539548 GAL3ST4Q96RP7 486 aa8.64□□□□□ -1.03
CDH13-204ENST00000539548 TBL1XR1Q9BZK7 514 aa8.64□□□□□ -1.03
CDH13-204ENST00000539548 UCK1Q9HA47 277 aa8.64□□□□□ -1.03
CDH13-204ENST00000539548 HPF1Q9NWY4 346 aa8.64□□□□□ -1.03
CDH13-204ENST00000539548 NDRG3Q9UGV2 375 aa8.64□□□□□ -1.03
CDH13-204ENST00000539548 PCDHB10Q9UN67 800 aa8.64□□□□□ -1.03
CDH13-204ENST00000539548 KLF2Q9Y5W3 355 aaPredicted RBP8.64□□□□□ -1.03
CDH13-204ENST00000539548 CUL9Q8IWT3 2517 aa8.64□□□□□ -1.03
CDH13-204ENST00000539548 TRBV6-7A0A0A0MS04 114 aa8.63□□□□□ -1.03
CDH13-204ENST00000539548 A6NIZ1 184 aa8.63□□□□□ -1.03
CDH13-204ENST00000539548 DBX1A6NMT0 343 aa8.63□□□□□ -1.03
CDH13-204ENST00000539548 OR2AT4A6NND4 320 aa8.63□□□□□ -1.03
CDH13-204ENST00000539548 P2RY10O00398 339 aa8.63□□□□□ -1.03
CDH13-204ENST00000539548 ZNF208O43345 1280 aa8.63□□□□□ -1.03
CDH13-204ENST00000539548 OR2T1O43869 369 aa8.63□□□□□ -1.03
CDH13-204ENST00000539548 SCGNO76038 276 aa8.63□□□□□ -1.03
CDH13-204ENST00000539548 AHSA1O95433 338 aa8.63□□□□□ -1.03
CDH13-204ENST00000539548 BPNT1O95861 308 aa8.63□□□□□ -1.03
CDH13-204ENST00000539548 ERCC1P07992 297 aaPredicted RBP8.63□□□□□ -1.03
CDH13-204ENST00000539548 TBPP20226 339 aa8.63□□□□□ -1.03
CDH13-204ENST00000539548 PSMB6P28072 239 aa8.63□□□□□ -1.03
CDH13-204ENST00000539548 BDKRB2P30411 391 aa8.63□□□□□ -1.03
CDH13-204ENST00000539548 AVPR2P30518 371 aa8.63□□□□□ -1.03
CDH13-204ENST00000539548 NR0B1P51843 470 aaKnown RBP8.63□□□□□ -1.03
CDH13-204ENST00000539548 PNLIPRP2P54317 469 aa8.63□□□□□ -1.03
CDH13-204ENST00000539548 RAP1BP61224 184 aa8.63□□□□□ -1.03
CDH13-204ENST00000539548 RAP1AP62834 184 aa8.63□□□□□ -1.03
CDH13-204ENST00000539548 ZP4Q12836 540 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms