RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 KRTAP27-1Q3LI81 207 aa11.25□□□□□ -0.61
CCDC42-202ENST00000539522 BEX5Q5H9J7 111 aa11.25□□□□□ -0.61
CCDC42-202ENST00000539522 SYT6Q5T7P8 510 aaPredicted RBP11.25□□□□□ -0.61
CCDC42-202ENST00000539522 UBE2UQ5VVX9 321 aa11.25□□□□□ -0.61
CCDC42-202ENST00000539522 VASH1Q7L8A9 365 aaPredicted RBP11.25□□□□□ -0.61
CCDC42-202ENST00000539522 GPR141Q7Z602 305 aa11.25□□□□□ -0.61
CCDC42-202ENST00000539522 CCDC36Q8IYA8 594 aa11.25□□□□□ -0.61
CCDC42-202ENST00000539522 RFLNBQ8N5W9 214 aa11.25□□□□□ -0.61
CCDC42-202ENST00000539522 ACBD7Q8N6N7 88 aa11.25□□□□□ -0.61
CCDC42-202ENST00000539522 NANOGP1Q8N7R0 232 aa11.25□□□□□ -0.61
CCDC42-202ENST00000539522 ST7LQ8TDW4 575 aa11.25□□□□□ -0.61
CCDC42-202ENST00000539522 SLC7A6Q92536 515 aa11.25□□□□□ -0.61
CCDC42-202ENST00000539522 NRGNQ92686 78 aa11.25□□□□□ -0.61
CCDC42-202ENST00000539522 MUL1Q969V5 352 aa11.25□□□□□ -0.61
CCDC42-202ENST00000539522 POM121L2Q96KW2 1035 aa11.25□□□□□ -0.61
CCDC42-202ENST00000539522 MYCBPQ99417 103 aaPredicted RBP11.25□□□□□ -0.61
CCDC42-202ENST00000539522 LIME1Q9H400 295 aa11.25□□□□□ -0.61
CCDC42-202ENST00000539522 PLEKHF2Q9H8W4 249 aa11.25□□□□□ -0.61
CCDC42-202ENST00000539522 INPP5EQ9NRR6 644 aa11.25□□□□□ -0.61
CCDC42-202ENST00000539522 ABCA4P78363 2273 aa11.25□□□□□ -0.61
CCDC42-202ENST00000539522 HEATR1Q9H583 2144 aaKnown RBP11.24□□□□□ -0.61
CCDC42-202ENST00000539522 IGHV2OR16-5A0A0B4J2B6 119 aa11.24□□□□□ -0.61
CCDC42-202ENST00000539522 OR6C6A6NF89 314 aa11.24□□□□□ -0.61
CCDC42-202ENST00000539522 ATP6V1G2-DDX39BF2Z307 99 aa11.24□□□□□ -0.61
CCDC42-202ENST00000539522 ABCD4O14678 606 aa11.24□□□□□ -0.61
CCDC42-202ENST00000539522 IGHA1P01876 353 aa11.24□□□□□ -0.61
CCDC42-202ENST00000539522 SERPINA5P05154 406 aa11.24□□□□□ -0.61
CCDC42-202ENST00000539522 SBK2P0C263 348 aa11.24□□□□□ -0.61
CCDC42-202ENST00000539522 OR2T7P0C7T2 308 aa11.24□□□□□ -0.61
CCDC42-202ENST00000539522 APEX1P27695 318 aaKnown RBP11.24□□□□□ -0.61
CCDC42-202ENST00000539522 ARR3P36575 388 aa11.24□□□□□ -0.61
CCDC42-202ENST00000539522 AQP6Q13520 282 aa11.24□□□□□ -0.61
CCDC42-202ENST00000539522 SLC36A2Q495M3 483 aa11.24□□□□□ -0.61
CCDC42-202ENST00000539522 TMEM255AQ5JRV8 349 aa11.24□□□□□ -0.61
CCDC42-202ENST00000539522 TEX30Q5JUR7 227 aa11.24□□□□□ -0.61
CCDC42-202ENST00000539522 C1QTNF12Q5T7M4 302 aa11.24□□□□□ -0.61
CCDC42-202ENST00000539522 ADAM5Q6NVV9 412 aa11.24□□□□□ -0.61
CCDC42-202ENST00000539522 SYT9Q86SS6 491 aa11.24□□□□□ -0.61
CCDC42-202ENST00000539522 SATL1Q86VE3 508 aa11.24□□□□□ -0.61
CCDC42-202ENST00000539522 OR4F15Q8NGB8 312 aa11.24□□□□□ -0.61
CCDC42-202ENST00000539522 OR51G2Q8NGK0 314 aa11.24□□□□□ -0.61
CCDC42-202ENST00000539522 OR6K6Q8NGW6 343 aa11.24□□□□□ -0.61
CCDC42-202ENST00000539522 OR2T27Q8NH04 317 aa11.24□□□□□ -0.61
CCDC42-202ENST00000539522 IGFBPL1Q8WX77 278 aa11.24□□□□□ -0.61
CCDC42-202ENST00000539522 TMIGD2Q96BF3 282 aa11.24□□□□□ -0.61
CCDC42-202ENST00000539522 DGCR14Q96DF8 476 aaKnown RBP11.24□□□□□ -0.61
CCDC42-202ENST00000539522 MND1Q9BWT6 205 aa11.24□□□□□ -0.61
CCDC42-202ENST00000539522 ADGRL4Q9HBW9 690 aa11.24□□□□□ -0.61
CCDC42-202ENST00000539522 KCNG2Q9UJ96 466 aa11.24□□□□□ -0.61
CCDC42-202ENST00000539522 COPS3Q9UNS2 423 aa11.24□□□□□ -0.61
CCDC42-202ENST00000539522 FLNBO75369 2602 aaKnown RBP11.24□□□□□ -0.61
CCDC42-202ENST00000539522 DAPL1A0PJW8 107 aa11.23□□□□□ -0.61
CCDC42-202ENST00000539522 C5orf63A6NC05 138 aa11.23□□□□□ -0.61
CCDC42-202ENST00000539522 E7EQL1 145 aa11.23□□□□□ -0.61
CCDC42-202ENST00000539522 ZNF593O00488 134 aaPredicted RBP11.23□□□□□ -0.61
CCDC42-202ENST00000539522 INMTO95050 263 aa11.23□□□□□ -0.61
CCDC42-202ENST00000539522 FARS2O95363 451 aaKnown RBP11.23□□□□□ -0.61
CCDC42-202ENST00000539522 DBHP09172 617 aa11.23□□□□□ -0.61
CCDC42-202ENST00000539522 HOXC12P31275 282 aa11.23□□□□□ -0.61
CCDC42-202ENST00000539522 WNT5AP41221 380 aa11.23□□□□□ -0.61
CCDC42-202ENST00000539522 GUCA1AP43080 201 aaPredicted RBP11.23□□□□□ -0.61
CCDC42-202ENST00000539522 ENTPD1P49961 510 aa11.23□□□□□ -0.61
CCDC42-202ENST00000539522 ETV1P50549 477 aa11.23□□□□□ -0.61
CCDC42-202ENST00000539522 ACTC1P68032 377 aa11.23□□□□□ -0.61
CCDC42-202ENST00000539522 ACTA1P68133 377 aa11.23□□□□□ -0.61
CCDC42-202ENST00000539522 ADAM8P78325 824 aa11.23□□□□□ -0.61
CCDC42-202ENST00000539522 NKX6-1P78426 367 aaPredicted RBP11.23□□□□□ -0.61
CCDC42-202ENST00000539522 ZNF704Q6ZNC4 412 aaPredicted RBP11.23□□□□□ -0.61
CCDC42-202ENST00000539522 CDC20BQ86Y33 519 aa11.23□□□□□ -0.61
CCDC42-202ENST00000539522 EGFL6Q8IUX8 553 aa11.23□□□□□ -0.61
CCDC42-202ENST00000539522 COG8Q96MW5 612 aa11.23□□□□□ -0.61
CCDC42-202ENST00000539522 CNN2Q99439 309 aaKnown RBP11.23□□□□□ -0.61
CCDC42-202ENST00000539522 MNTQ99583 582 aa11.23□□□□□ -0.61
CCDC42-202ENST00000539522 ERVK13-1Q9NX77 482 aa11.23□□□□□ -0.61
CCDC42-202ENST00000539522 CLEC2DQ9UHP7 191 aa11.23□□□□□ -0.61
CCDC42-202ENST00000539522 GDF2Q9UK05 429 aaPredicted RBP11.23□□□□□ -0.61
CCDC42-202ENST00000539522 TIMM10BQ9Y5J6 103 aa11.23□□□□□ -0.61
CCDC42-202ENST00000539522 POLQO75417 2590 aa11.23□□□□□ -0.61
CCDC42-202ENST00000539522 TMEM129A0AVI4 362 aa11.22□□□□□ -0.61
CCDC42-202ENST00000539522 C12orf71A8MTZ7 269 aa11.22□□□□□ -0.61
CCDC42-202ENST00000539522 H3BSA7 217 aa11.22□□□□□ -0.61
CCDC42-202ENST00000539522 CASKO14936 926 aa11.22□□□□□ -0.61
CCDC42-202ENST00000539522 APOL3O95236 402 aa11.22□□□□□ -0.61
CCDC42-202ENST00000539522 HLA-DQA2P01906 255 aa11.22□□□□□ -0.61
CCDC42-202ENST00000539522 MRPL3P09001 348 aaKnown RBP11.22□□□□□ -0.61
CCDC42-202ENST00000539522 LIMS3P0CW19 117 aa11.22□□□□□ -0.61
CCDC42-202ENST00000539522 LIMS4P0CW20 117 aa11.22□□□□□ -0.61
CCDC42-202ENST00000539522 PTAFRP25105 342 aa11.22□□□□□ -0.61
CCDC42-202ENST00000539522 NAA10P41227 235 aaPredicted RBP11.22□□□□□ -0.61
CCDC42-202ENST00000539522 SPHARQ15513 63 aa11.22□□□□□ -0.61
CCDC42-202ENST00000539522 TMEM108Q6UXF1 575 aa11.22□□□□□ -0.61
CCDC42-202ENST00000539522 TMPRSS11AQ6ZMR5 421 aa11.22□□□□□ -0.61
CCDC42-202ENST00000539522 SHFQ7M4L6 423 aa11.22□□□□□ -0.61
CCDC42-202ENST00000539522 SSX8Q7RTT4 187 aa11.22□□□□□ -0.61
CCDC42-202ENST00000539522 ZNF367Q7RTV3 350 aa11.22□□□□□ -0.61
CCDC42-202ENST00000539522 SLC16A9Q7RTY1 509 aa11.22□□□□□ -0.61
CCDC42-202ENST00000539522 DPY19L4Q7Z388 723 aa11.22□□□□□ -0.61
CCDC42-202ENST00000539522 DPPA2Q7Z7J5 298 aa11.22□□□□□ -0.61
CCDC42-202ENST00000539522 LHFPL3Q86UP9 236 aa11.22□□□□□ -0.61
CCDC42-202ENST00000539522 NAA40Q86UY6 237 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms