RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 HSD17B10Q99714 261 aaKnown RBP3.91□□□□□ -1.78
TRAV11-201ENST00000539512 ACTR3CQ9C0K3 210 aaPredicted RBP3.91□□□□□ -1.78
TRAV11-201ENST00000539512 RETNQ9HD89 108 aa3.91□□□□□ -1.78
TRAV11-201ENST00000539512 C20orf96Q9NUD7 363 aaPredicted RBP3.91□□□□□ -1.78
TRAV11-201ENST00000539512 PTTG3PQ9NZH4 202 aa3.91□□□□□ -1.78
TRAV11-201ENST00000539512 ZNF282Q9UDV7 671 aaPredicted RBP3.91□□□□□ -1.78
TRAV11-201ENST00000539512 SCN2AQ99250 2005 aa3.9□□□□□ -1.78
TRAV11-201ENST00000539512 CCNB2O95067 398 aa3.9□□□□□ -1.79
TRAV11-201ENST00000539512 LSM8O95777 96 aaKnown RBP3.9□□□□□ -1.79
TRAV11-201ENST00000539512 APCSP02743 223 aa3.9□□□□□ -1.79
TRAV11-201ENST00000539512 ERCC1P07992 297 aaPredicted RBP3.9□□□□□ -1.79
TRAV11-201ENST00000539512 C1GALT1C1LP0DN25 315 aa3.9□□□□□ -1.79
TRAV11-201ENST00000539512 CRISP1P54107 249 aa3.9□□□□□ -1.79
TRAV11-201ENST00000539512 RCAN2Q14206 197 aa3.9□□□□□ -1.79
TRAV11-201ENST00000539512 SHHQ15465 462 aa3.9□□□□□ -1.79
TRAV11-201ENST00000539512 XKR4Q5GH76 650 aa3.9□□□□□ -1.79
TRAV11-201ENST00000539512 ZNF684Q5T5D7 378 aa3.9□□□□□ -1.79
TRAV11-201ENST00000539512 MBOAT2Q6ZWT7 520 aa3.9□□□□□ -1.79
TRAV11-201ENST00000539512 SCD5Q86SK9 330 aa3.9□□□□□ -1.79
TRAV11-201ENST00000539512 ARRDC1Q8N5I2 433 aa3.9□□□□□ -1.79
TRAV11-201ENST00000539512 COX18Q8N8Q8 333 aa3.9□□□□□ -1.79
TRAV11-201ENST00000539512 OR52E2Q8NGJ4 325 aa3.9□□□□□ -1.79
TRAV11-201ENST00000539512 OR9G4Q8NGQ1 327 aa3.9□□□□□ -1.79
TRAV11-201ENST00000539512 TSEN15Q8WW01 171 aaKnown RBP3.9□□□□□ -1.79
TRAV11-201ENST00000539512 C8orf44Q96CB5 159 aa3.9□□□□□ -1.79
TRAV11-201ENST00000539512 C11orf70Q9BRQ4 267 aa3.9□□□□□ -1.79
TRAV11-201ENST00000539512 GEMIN7Q9H840 131 aaKnown RBP3.9□□□□□ -1.79
TRAV11-201ENST00000539512 ZNF835Q9Y2P0 537 aa3.9□□□□□ -1.79
TRAV11-201ENST00000539512 CEP164Q9UPV0 1460 aa3.9□□□□□ -1.79
TRAV11-201ENST00000539512 IGLV1-36A0A0B4J1U3 117 aa3.89□□□□□ -1.79
TRAV11-201ENST00000539512 TRAV40A0A0B4J280 105 aa3.89□□□□□ -1.79
TRAV11-201ENST00000539512 SYCE1LA8MT33 242 aa3.89□□□□□ -1.79
TRAV11-201ENST00000539512 SERPINE3A8MV23 424 aa3.89□□□□□ -1.79
TRAV11-201ENST00000539512 WRBO00258 174 aa3.89□□□□□ -1.79
TRAV11-201ENST00000539512 PMELP40967 661 aa3.89□□□□□ -1.79
TRAV11-201ENST00000539512 CHRFAM7AQ494W8 412 aa3.89□□□□□ -1.79
TRAV11-201ENST00000539512 AP1ARQ63HQ0 302 aa3.89□□□□□ -1.79
TRAV11-201ENST00000539512 SPESP1Q6UW49 350 aa3.89□□□□□ -1.79
TRAV11-201ENST00000539512 C12orf54Q6X4T0 127 aa3.89□□□□□ -1.79
TRAV11-201ENST00000539512 SHISA6Q6ZSJ9 500 aa3.89□□□□□ -1.79
TRAV11-201ENST00000539512 BHLHA15Q7RTS1 189 aaPredicted RBP3.89□□□□□ -1.79
TRAV11-201ENST00000539512 WDR86Q86TI4 376 aa3.89□□□□□ -1.79
TRAV11-201ENST00000539512 FAM71AQ8IYT1 594 aa3.89□□□□□ -1.79
TRAV11-201ENST00000539512 ZNF561Q8N587 486 aa3.89□□□□□ -1.79
TRAV11-201ENST00000539512 JAGN1Q8N5M9 183 aa3.89□□□□□ -1.79
TRAV11-201ENST00000539512 OR6Q1Q8NGQ2 317 aa3.89□□□□□ -1.79
TRAV11-201ENST00000539512 OR8U1Q8NH10 309 aa3.89□□□□□ -1.79
TRAV11-201ENST00000539512 FLYWCH2Q96CP2 140 aaKnown RBP3.89□□□□□ -1.79
TRAV11-201ENST00000539512 ZYG11BQ9C0D3 744 aa3.89□□□□□ -1.79
TRAV11-201ENST00000539512 BEX1Q9HBH7 125 aa3.89□□□□□ -1.79
TRAV11-201ENST00000539512 SAR1BQ9Y6B6 198 aa3.89□□□□□ -1.79
TRAV11-201ENST00000539512 GAPVD1Q14C86 1478 aa3.89□□□□□ -1.79
TRAV11-201ENST00000539512 BAZ1BQ9UIG0 1483 aaKnown RBP3.89□□□□□ -1.79
TRAV11-201ENST00000539512 FLOT1O75955 427 aa3.88□□□□□ -1.79
TRAV11-201ENST00000539512 SEMA3DO95025 777 aa3.88□□□□□ -1.79
TRAV11-201ENST00000539512 YIF1AO95070 293 aa3.88□□□□□ -1.79
TRAV11-201ENST00000539512 ZNF286BP0CG31 522 aa3.88□□□□□ -1.79
TRAV11-201ENST00000539512 IL32P24001 234 aa3.88□□□□□ -1.79
TRAV11-201ENST00000539512 STOMP27105 288 aa3.88□□□□□ -1.79
TRAV11-201ENST00000539512 PITPNAQ00169 270 aa3.88□□□□□ -1.79
TRAV11-201ENST00000539512 ZNF880Q6PDB4 577 aa3.88□□□□□ -1.79
TRAV11-201ENST00000539512 NTM-AS1Q6ZSK4 140 aa3.88□□□□□ -1.79
TRAV11-201ENST00000539512 OR11H7Q8NGC8 314 aa3.88□□□□□ -1.79
TRAV11-201ENST00000539512 PTX4Q96A99 478 aa3.88□□□□□ -1.79
TRAV11-201ENST00000539512 RSPO3Q9BXY4 272 aaPredicted RBP3.88□□□□□ -1.79
TRAV11-201ENST00000539512 EXO5Q9H790 373 aa3.88□□□□□ -1.79
TRAV11-201ENST00000539512 MRM3Q9HC36 420 aaKnown RBP3.88□□□□□ -1.79
TRAV11-201ENST00000539512 OPN4Q9UHM6 478 aa3.88□□□□□ -1.79
TRAV11-201ENST00000539512 KDM6BO15054 1643 aa3.88□□□□□ -1.79
TRAV11-201ENST00000539512 FANCD2Q9BXW9 1451 aa3.87□□□□□ -1.79
TRAV11-201ENST00000539512 NVLO15381 856 aaKnown RBP3.87□□□□□ -1.79
TRAV11-201ENST00000539512 CHST10O43529 356 aa3.87□□□□□ -1.79
TRAV11-201ENST00000539512 SLC22A5O76082 557 aa3.87□□□□□ -1.79
TRAV11-201ENST00000539512 ZNF688P0C7X2 276 aa3.87□□□□□ -1.79
TRAV11-201ENST00000539512 POLR2MP0CAP2 368 aa3.87□□□□□ -1.79
TRAV11-201ENST00000539512 OR1E1P30953 314 aa3.87□□□□□ -1.79
TRAV11-201ENST00000539512 RAB7AP51149 207 aa3.87□□□□□ -1.79
TRAV11-201ENST00000539512 SYNJ2BPP57105 145 aa3.87□□□□□ -1.79
TRAV11-201ENST00000539512 ZNF266Q14584 549 aa3.87□□□□□ -1.79
TRAV11-201ENST00000539512 HSDL1Q3SXM5 330 aa3.87□□□□□ -1.79
TRAV11-201ENST00000539512 AVPI1Q5T686 147 aa3.87□□□□□ -1.79
TRAV11-201ENST00000539512 Q5W150 140 aa3.87□□□□□ -1.79
TRAV11-201ENST00000539512 NPSR1Q6W5P4 371 aa3.87□□□□□ -1.79
TRAV11-201ENST00000539512 WDFY1Q8IWB7 410 aa3.87□□□□□ -1.79
TRAV11-201ENST00000539512 RNF182Q8N6D2 247 aa3.87□□□□□ -1.79
TRAV11-201ENST00000539512 OR9A2Q8NGT5 310 aa3.87□□□□□ -1.79
TRAV11-201ENST00000539512 NRGNQ92686 78 aa3.87□□□□□ -1.79
TRAV11-201ENST00000539512 MYOZ1Q9NP98 299 aaPredicted RBP3.87□□□□□ -1.79
TRAV11-201ENST00000539512 ENOPH1Q9UHY7 261 aa3.87□□□□□ -1.79
TRAV11-201ENST00000539512 RFNGQ9Y644 331 aa3.87□□□□□ -1.79
TRAV11-201ENST00000539512 ARHGAP21Q5T5U3 1957 aa3.87□□□□□ -1.79
TRAV11-201ENST00000539512 ADAMTS13Q76LX8 1427 aa3.87□□□□□ -1.79
TRAV11-201ENST00000539512 AQRO60306 1485 aaKnown RBP eCLIP3.86□□□□□ -1.79
TRAV11-201ENST00000539512 HMGXB3Q12766 1538 aa3.86□□□□□ -1.79
TRAV11-201ENST00000539512 IGHV1OR15-9A0A0B4J2B8 117 aa3.86□□□□□ -1.79
TRAV11-201ENST00000539512 KBTBD11-OT1A0A1B0GTJ5 212 aa3.86□□□□□ -1.79
TRAV11-201ENST00000539512 BPY2O14599 106 aa3.86□□□□□ -1.79
TRAV11-201ENST00000539512 DNALI1O14645 258 aaPredicted RBP3.86□□□□□ -1.79
TRAV11-201ENST00000539512 RBBP9O75884 186 aa3.86□□□□□ -1.79
TRAV11-201ENST00000539512 HBE1P02100 147 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms