RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 PAX8Q06710 450 aa7.1□□□□□ -1.27
USP28-203ENST00000537490 DBPQ10586 325 aaPredicted RBP7.1□□□□□ -1.27
USP28-203ENST00000537490 SEC23BQ15437 767 aa7.1□□□□□ -1.27
USP28-203ENST00000537490 MEP1BQ16820 701 aa7.1□□□□□ -1.27
USP28-203ENST00000537490 RSPO1Q2MKA7 263 aaPredicted RBP7.1□□□□□ -1.27
USP28-203ENST00000537490 GPR139Q6DWJ6 353 aa7.1□□□□□ -1.27
USP28-203ENST00000537490 OR2T2Q6IF00 324 aa7.1□□□□□ -1.27
USP28-203ENST00000537490 PTCHD4Q6ZW05 846 aa7.1□□□□□ -1.27
USP28-203ENST00000537490 DOK3Q7L591 496 aa7.1□□□□□ -1.27
USP28-203ENST00000537490 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.1□□□□□ -1.27
USP28-203ENST00000537490 GLB1L2Q8IW92 636 aa7.1□□□□□ -1.27
USP28-203ENST00000537490 ZNF420Q8TAQ5 688 aaPredicted RBP7.1□□□□□ -1.27
USP28-203ENST00000537490 FAM162AQ96A26 154 aa7.1□□□□□ -1.27
USP28-203ENST00000537490 RNF166Q96A37 237 aaPredicted RBP7.1□□□□□ -1.27
USP28-203ENST00000537490 C1orf147Q96MC9 270 aaPredicted RBP7.1□□□□□ -1.27
USP28-203ENST00000537490 TSSK2Q96PF2 358 aa7.1□□□□□ -1.27
USP28-203ENST00000537490 GPX7Q96SL4 187 aaPredicted RBP7.1□□□□□ -1.27
USP28-203ENST00000537490 GPA33Q99795 319 aa7.1□□□□□ -1.27
USP28-203ENST00000537490 HOPXQ9BPY8 73 aaPredicted RBP7.1□□□□□ -1.27
USP28-203ENST00000537490 ANKRD19PQ9H560 264 aa7.1□□□□□ -1.27
USP28-203ENST00000537490 TMEM165Q9HC07 324 aa7.1□□□□□ -1.27
USP28-203ENST00000537490 GCM1Q9NP62 436 aa7.1□□□□□ -1.27
USP28-203ENST00000537490 VSX1Q9NZR4 365 aaPredicted RBP7.1□□□□□ -1.27
USP28-203ENST00000537490 NDUFAF4Q9P032 175 aa7.1□□□□□ -1.27
USP28-203ENST00000537490 TMEM5Q9Y2B1 443 aa7.1□□□□□ -1.27
USP28-203ENST00000537490 PCDHGB1Q9Y5G3 927 aa7.1□□□□□ -1.27
USP28-203ENST00000537490 IER3IP1Q9Y5U9 82 aa7.1□□□□□ -1.27
USP28-203ENST00000537490 SOX21Q9Y651 276 aaPredicted RBP7.1□□□□□ -1.27
USP28-203ENST00000537490 IGHV3OR16-10A0A075B7F0 116 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 TRBV4-1A0A0J9YWV2 114 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 IGHV3-64DA0A0J9YX35 117 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 A0A1W2PRQ8 180 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 DCTN6O00399 190 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 SURF4O15260 269 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 DIRAS1O95057 198 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 TXNDC12O95881 172 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 CYB5R3P00387 301 aaPredicted RBP7.09□□□□□ -1.27
USP28-203ENST00000537490 PRTN3P24158 256 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 CD80P33681 288 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 PMELP40967 661 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 CENPAP49450 140 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 MMP16P51512 607 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 PRSS12P56730 875 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 HIST1H3AP68431 136 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 PAX2Q02962 417 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 DGCR6Q14129 220 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 KCNMB1Q16558 191 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 ESCO2Q56NI9 601 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 ARMCX4Q5H9R4 360 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 FGD3Q5JSP0 725 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 FAM201AQ5SY85 155 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 HIST2H3PS2Q5TEC6 136 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 CORO6Q6QEF8 472 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 FBXW12Q6X9E4 464 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 RBMS3Q6XE24 437 aaKnown RBP7.09□□□□□ -1.27
USP28-203ENST00000537490 DPY19L2P2Q6ZN68 376 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 HIST2H3AQ71DI3 136 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 JAZF1Q86VZ6 243 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 CYP4Z1Q86W10 505 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 OR8G5Q8NG78 346 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 OR10AD1Q8NGE0 317 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 TAF15Q92804 592 aaKnown RBP eCLIP7.09□□□□□ -1.27
USP28-203ENST00000537490 RSRC1Q96IZ7 334 aaKnown RBP7.09□□□□□ -1.27
USP28-203ENST00000537490 MEGF10Q96KG7 1140 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 C7orf34Q96L11 122 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 COG8Q96MW5 612 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 KCTD14Q9BQ13 255 aaPredicted RBP7.09□□□□□ -1.27
USP28-203ENST00000537490 MRI1Q9BV20 369 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 ZNF747Q9BV97 191 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 NDEL1Q9GZM8 345 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 WDR76Q9H967 626 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 EFCAB1Q9HAE3 211 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 SRA1Q9HD15 236 aaKnown RBP7.09□□□□□ -1.27
USP28-203ENST00000537490 LHFPL6Q9Y693 200 aa7.09□□□□□ -1.27
USP28-203ENST00000537490 IGLV1-36A0A0B4J1U3 117 aa7.08□□□□□ -1.28
USP28-203ENST00000537490 DNAJC9-AS1A6NH13 148 aa7.08□□□□□ -1.28
USP28-203ENST00000537490 UNC119BA6NIH7 251 aa7.08□□□□□ -1.28
USP28-203ENST00000537490 IQCF6A8MYZ5 107 aa7.08□□□□□ -1.28
USP28-203ENST00000537490 F5H5P2 479 aa7.08□□□□□ -1.28
USP28-203ENST00000537490 J3QW42 95 aa7.08□□□□□ -1.28
USP28-203ENST00000537490 TMPRSS2O15393 492 aa7.08□□□□□ -1.28
USP28-203ENST00000537490 MLNRO43193 412 aa7.08□□□□□ -1.28
USP28-203ENST00000537490 PPP1R3DO95685 299 aa7.08□□□□□ -1.28
USP28-203ENST00000537490 IGHV4-38-2P0DP08 117 aa7.08□□□□□ -1.28
USP28-203ENST00000537490 SELEP16581 610 aa7.08□□□□□ -1.28
USP28-203ENST00000537490 RHCEP18577 417 aa7.08□□□□□ -1.28
USP28-203ENST00000537490 RGS6P49758 472 aa7.08□□□□□ -1.28
USP28-203ENST00000537490 RPS6KA3P51812 740 aa7.08□□□□□ -1.28
USP28-203ENST00000537490 PSME3P61289 254 aa7.08□□□□□ -1.28
USP28-203ENST00000537490 FOXL1Q12952 345 aa7.08□□□□□ -1.28
USP28-203ENST00000537490 BAMBIQ13145 260 aa7.08□□□□□ -1.28
USP28-203ENST00000537490 GLYATQ6IB77 296 aa7.08□□□□□ -1.28
USP28-203ENST00000537490 SLC27A4Q6P1M0 643 aa7.08□□□□□ -1.28
USP28-203ENST00000537490 HACD2Q6Y1H2 254 aa7.08□□□□□ -1.28
USP28-203ENST00000537490 ADCK1Q86TW2 530 aa7.08□□□□□ -1.28
USP28-203ENST00000537490 NAA40Q86UY6 237 aa7.08□□□□□ -1.28
USP28-203ENST00000537490 KLBQ86Z14 1044 aa7.08□□□□□ -1.28
USP28-203ENST00000537490 OR6V1Q8N148 313 aa7.08□□□□□ -1.28
USP28-203ENST00000537490 MUC20Q8N307 709 aaPredicted RBP7.08□□□□□ -1.28
USP28-203ENST00000537490 FAM86B1Q8N7N1 296 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms