RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 RNASE13Q5GAN3 156 aaKnown RBP1.73□□□□□ -2.13
CCDC7-208ENST00000537047 PPP1R42Q7Z4L9 355 aa1.73□□□□□ -2.13
CCDC7-208ENST00000537047 NKAIN4Q8IVV8 208 aa1.73□□□□□ -2.13
CCDC7-208ENST00000537047 UBE2J2Q8N2K1 259 aa1.73□□□□□ -2.13
CCDC7-208ENST00000537047 CSGALNACT2Q8N6G5 542 aa1.73□□□□□ -2.13
CCDC7-208ENST00000537047 ZFP41Q8N8Y5 198 aa1.73□□□□□ -2.13
CCDC7-208ENST00000537047 EIF1ADQ8N9N8 165 aaKnown RBP1.73□□□□□ -2.13
CCDC7-208ENST00000537047 SPANXA2-OT1Q8N9U9 137 aa1.73□□□□□ -2.13
CCDC7-208ENST00000537047 CHST4Q8NCG5 386 aa1.73□□□□□ -2.13
CCDC7-208ENST00000537047 TMEM230Q96A57 120 aa1.73□□□□□ -2.13
CCDC7-208ENST00000537047 TRIM44Q96DX7 344 aaPredicted RBP1.73□□□□□ -2.13
CCDC7-208ENST00000537047 ZBTB18Q99592 522 aa1.73□□□□□ -2.13
CCDC7-208ENST00000537047 RBBP8Q99708 897 aa1.73□□□□□ -2.13
CCDC7-208ENST00000537047 C8orf17Q9NRJ1 99 aa1.73□□□□□ -2.13
CCDC7-208ENST00000537047 RHBDL2Q9NX52 303 aa1.73□□□□□ -2.13
CCDC7-208ENST00000537047 PSMC3IPQ9P2W1 217 aaPredicted RBP1.73□□□□□ -2.13
CCDC7-208ENST00000537047 UXTQ9UBK9 157 aaPredicted RBP1.73□□□□□ -2.13
CCDC7-208ENST00000537047 BLOC1S6Q9UL45 172 aa1.73□□□□□ -2.13
CCDC7-208ENST00000537047 CAMTA1Q9Y6Y1 1673 aa1.72□□□□□ -2.13
CCDC7-208ENST00000537047 IGHV3-49A0A0A0MS15 119 aa1.72□□□□□ -2.13
CCDC7-208ENST00000537047 OR6C70A6NIJ9 312 aa1.72□□□□□ -2.13
CCDC7-208ENST00000537047 LYRM9A8MSI8 78 aa1.72□□□□□ -2.13
CCDC7-208ENST00000537047 AIM2O14862 343 aa1.72□□□□□ -2.13
CCDC7-208ENST00000537047 NVLO15381 856 aaKnown RBP1.72□□□□□ -2.13
CCDC7-208ENST00000537047 KLHL41O60662 606 aa1.72□□□□□ -2.13
CCDC7-208ENST00000537047 FKBP6O75344 327 aa1.72□□□□□ -2.13
CCDC7-208ENST00000537047 H6PDO95479 791 aa1.72□□□□□ -2.13
CCDC7-208ENST00000537047 IGLV3-25P01717 112 aa1.72□□□□□ -2.13
CCDC7-208ENST00000537047 IGLV6-57P01721 117 aa1.72□□□□□ -2.13
CCDC7-208ENST00000537047 IGHV3-11P01762 117 aa1.72□□□□□ -2.13
CCDC7-208ENST00000537047 SERPINA5P05154 406 aa1.72□□□□□ -2.13
CCDC7-208ENST00000537047 CTSLP07711 333 aa1.72□□□□□ -2.13
CCDC7-208ENST00000537047 ACSM4P0C7M7 580 aa1.72□□□□□ -2.13
CCDC7-208ENST00000537047 PRLHRP49683 370 aa1.72□□□□□ -2.13
CCDC7-208ENST00000537047 HNMTP50135 292 aa1.72□□□□□ -2.13
CCDC7-208ENST00000537047 CDH6P55285 790 aa1.72□□□□□ -2.13
CCDC7-208ENST00000537047 TGM3Q08188 693 aa1.72□□□□□ -2.13
CCDC7-208ENST00000537047 CHIT1Q13231 466 aa1.72□□□□□ -2.13
CCDC7-208ENST00000537047 PPP1R7Q15435 360 aa1.72□□□□□ -2.13
CCDC7-208ENST00000537047 FAM222AQ5U5X8 452 aa1.72□□□□□ -2.13
CCDC7-208ENST00000537047 OR2L3Q8NG85 312 aa1.72□□□□□ -2.13
CCDC7-208ENST00000537047 IP6K3Q96PC2 410 aa1.72□□□□□ -2.13
CCDC7-208ENST00000537047 ZNF317Q96PQ6 595 aaPredicted RBP1.72□□□□□ -2.13
CCDC7-208ENST00000537047 SHANK2-AS3Q9BTD1 123 aa1.72□□□□□ -2.13
CCDC7-208ENST00000537047 FGF20Q9NP95 211 aaPredicted RBP1.72□□□□□ -2.13
CCDC7-208ENST00000537047 STARD10Q9Y365 291 aa1.72□□□□□ -2.13
CCDC7-208ENST00000537047 PALLDQ8WX93 1383 aa1.72□□□□□ -2.13
CCDC7-208ENST00000537047 IGLV1-36A0A0B4J1U3 117 aa1.71□□□□□ -2.14
CCDC7-208ENST00000537047 GABRR3A8MPY1 467 aa1.71□□□□□ -2.14
CCDC7-208ENST00000537047 CRYGBP07316 175 aa1.71□□□□□ -2.14
CCDC7-208ENST00000537047 U2AF2P26368 475 aaKnown RBP eCLIP1.71□□□□□ -2.14
CCDC7-208ENST00000537047 TALDO1P37837 337 aa1.71□□□□□ -2.14
CCDC7-208ENST00000537047 RBM34P42696 430 aaKnown RBP1.71□□□□□ -2.14
CCDC7-208ENST00000537047 NSG1P42857 185 aa1.71□□□□□ -2.14
CCDC7-208ENST00000537047 TMED10P49755 219 aaKnown RBP1.71□□□□□ -2.14
CCDC7-208ENST00000537047 ZMYND11Q15326 602 aa1.71□□□□□ -2.14
CCDC7-208ENST00000537047 TEX30Q5JUR7 227 aa1.71□□□□□ -2.14
CCDC7-208ENST00000537047 GPR107Q5VW38 600 aa1.71□□□□□ -2.14
CCDC7-208ENST00000537047 H3F3CQ6NXT2 135 aa1.71□□□□□ -2.14
CCDC7-208ENST00000537047 NIPA1Q7RTP0 329 aa1.71□□□□□ -2.14
CCDC7-208ENST00000537047 MRPL55Q7Z7F7 128 aaKnown RBP1.71□□□□□ -2.14
CCDC7-208ENST00000537047 ZNF664Q8N3J9 261 aa1.71□□□□□ -2.14
CCDC7-208ENST00000537047 NECAB1Q8N987 351 aa1.71□□□□□ -2.14
CCDC7-208ENST00000537047 OR11H7Q8NGC8 314 aa1.71□□□□□ -2.14
CCDC7-208ENST00000537047 OR8J1Q8NGP2 316 aa1.71□□□□□ -2.14
CCDC7-208ENST00000537047 KLF14Q8TD94 323 aaPredicted RBP1.71□□□□□ -2.14
CCDC7-208ENST00000537047 RHOXF2Q9BQY4 288 aa1.71□□□□□ -2.14
CCDC7-208ENST00000537047 GGTLC1Q9BX51 225 aa1.71□□□□□ -2.14
CCDC7-208ENST00000537047 ANGPTL4Q9BY76 406 aa1.71□□□□□ -2.14
CCDC7-208ENST00000537047 ILKAPQ9H0C8 392 aaPredicted RBP1.71□□□□□ -2.14
CCDC7-208ENST00000537047 NEK6Q9HC98 313 aa1.71□□□□□ -2.14
CCDC7-208ENST00000537047 TMEM9BQ9NQ34 198 aa1.71□□□□□ -2.14
CCDC7-208ENST00000537047 SLC2A8Q9NY64 477 aa1.71□□□□□ -2.14
CCDC7-208ENST00000537047 IGHV1-3A0A0C4DH29 117 aa1.7□□□□□ -2.14
CCDC7-208ENST00000537047 OR5H1A6NKK0 313 aa1.7□□□□□ -2.14
CCDC7-208ENST00000537047 ZNF878C9JN71 531 aa1.7□□□□□ -2.14
CCDC7-208ENST00000537047 NDUFC2-KCTD14E9PQ53 114 aa1.7□□□□□ -2.14
CCDC7-208ENST00000537047 RAB29O14966 203 aa1.7□□□□□ -2.14
CCDC7-208ENST00000537047 HNRNPH3P31942 346 aaKnown RBP1.7□□□□□ -2.14
CCDC7-208ENST00000537047 NAA10P41227 235 aaPredicted RBP1.7□□□□□ -2.14
CCDC7-208ENST00000537047 STXBP1P61764 594 aaKnown RBP1.7□□□□□ -2.14
CCDC7-208ENST00000537047 RPL23P62829 140 aaKnown RBP1.7□□□□□ -2.14
CCDC7-208ENST00000537047 PPIDQ08752 370 aaKnown RBP1.7□□□□□ -2.14
CCDC7-208ENST00000537047 PRAMEF5Q5TYX0 476 aa1.7□□□□□ -2.14
CCDC7-208ENST00000537047 UBE2UQ5VVX9 321 aa1.7□□□□□ -2.14
CCDC7-208ENST00000537047 PRAMEF6Q5VXH4 476 aa1.7□□□□□ -2.14
CCDC7-208ENST00000537047 MBOAT1Q6ZNC8 495 aa1.7□□□□□ -2.14
CCDC7-208ENST00000537047 ZCCHC7Q8N3Z6 543 aaKnown RBP1.7□□□□□ -2.14
CCDC7-208ENST00000537047 OR10AD1Q8NGE0 317 aa1.7□□□□□ -2.14
CCDC7-208ENST00000537047 EEF1AKMT3Q96AZ1 226 aa1.7□□□□□ -2.14
CCDC7-208ENST00000537047 TUBGCP3Q96CW5 907 aa1.7□□□□□ -2.14
CCDC7-208ENST00000537047 WDR34Q96EX3 536 aa1.7□□□□□ -2.14
CCDC7-208ENST00000537047 TM2D3Q9BRN9 247 aa1.7□□□□□ -2.14
CCDC7-208ENST00000537047 CHCHD7Q9BUK0 85 aa1.7□□□□□ -2.14
CCDC7-208ENST00000537047 GCOM2Q9BZD3 368 aaPredicted RBP1.7□□□□□ -2.14
CCDC7-208ENST00000537047 ZSCAN16Q9H4T2 348 aaPredicted RBP1.7□□□□□ -2.14
CCDC7-208ENST00000537047 HRASLS2Q9NWW9 162 aa1.7□□□□□ -2.14
CCDC7-208ENST00000537047 HYPKQ9NX55 129 aa1.7□□□□□ -2.14
CCDC7-208ENST00000537047 USP47Q96K76 1375 aa1.7□□□□□ -2.14
CCDC7-208ENST00000537047 KRBOX1C9JBD0 128 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms