RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 ORMDL2Q53FV1 153 aa3.45□□□□□ -1.86
PRKDC-208ENST00000536710 CEMP1Q6PRD7 247 aaPredicted RBP3.45□□□□□ -1.86
PRKDC-208ENST00000536710 ZFP2Q6ZN57 461 aa3.45□□□□□ -1.86
PRKDC-208ENST00000536710 PGAM4Q8N0Y7 254 aa3.45□□□□□ -1.86
PRKDC-208ENST00000536710 CYB561D1Q8N8Q1 229 aa3.45□□□□□ -1.86
PRKDC-208ENST00000536710 LRRC75AQ8NAA5 344 aa3.45□□□□□ -1.86
PRKDC-208ENST00000536710 INO80EQ8NBZ0 244 aaPredicted RBP3.45□□□□□ -1.86
PRKDC-208ENST00000536710 NOXO1Q8NFA2 376 aa3.45□□□□□ -1.86
PRKDC-208ENST00000536710 OR10AD1Q8NGE0 317 aa3.45□□□□□ -1.86
PRKDC-208ENST00000536710 OR6Q1Q8NGQ2 317 aa3.45□□□□□ -1.86
PRKDC-208ENST00000536710 OR5W2Q8NH69 310 aa3.45□□□□□ -1.86
PRKDC-208ENST00000536710 KIAA1143Q96AT1 154 aaPredicted RBP3.45□□□□□ -1.86
PRKDC-208ENST00000536710 DYNLL2Q96FJ2 89 aa3.45□□□□□ -1.86
PRKDC-208ENST00000536710 CERS2Q96G23 380 aa3.45□□□□□ -1.86
PRKDC-208ENST00000536710 PDXPQ96GD0 296 aa3.45□□□□□ -1.86
PRKDC-208ENST00000536710 OPALINQ96PE5 141 aa3.45□□□□□ -1.86
PRKDC-208ENST00000536710 ZNF317Q96PQ6 595 aaPredicted RBP3.45□□□□□ -1.86
PRKDC-208ENST00000536710 ZDHHC4Q9NPG8 344 aa3.45□□□□□ -1.86
PRKDC-208ENST00000536710 TUBG2Q9NRH3 451 aa3.45□□□□□ -1.86
PRKDC-208ENST00000536710 SLC39A1Q9NY26 324 aa3.45□□□□□ -1.86
PRKDC-208ENST00000536710 ZNF222Q9UK12 451 aa3.45□□□□□ -1.86
PRKDC-208ENST00000536710 DDX19BQ9UMR2 479 aa3.45□□□□□ -1.86
PRKDC-208ENST00000536710 YARS2Q9Y2Z4 477 aaKnown RBP3.45□□□□□ -1.86
PRKDC-208ENST00000536710 ASTN1O14525 1302 aa3.44□□□□□ -1.86
PRKDC-208ENST00000536710 GTF3C1Q12789 2109 aa3.44□□□□□ -1.86
PRKDC-208ENST00000536710 H7C417 338 aa3.44□□□□□ -1.86
PRKDC-208ENST00000536710 SIVA1O15304 175 aa3.44□□□□□ -1.86
PRKDC-208ENST00000536710 NVLO15381 856 aaKnown RBP3.44□□□□□ -1.86
PRKDC-208ENST00000536710 ATF6P18850 670 aa3.44□□□□□ -1.86
PRKDC-208ENST00000536710 CD82P27701 267 aa3.44□□□□□ -1.86
PRKDC-208ENST00000536710 PEX19P40855 299 aa3.44□□□□□ -1.86
PRKDC-208ENST00000536710 GPR1P46091 355 aa3.44□□□□□ -1.86
PRKDC-208ENST00000536710 PPOXP50336 477 aa3.44□□□□□ -1.86
PRKDC-208ENST00000536710 CDKN2DP55273 166 aa3.44□□□□□ -1.86
PRKDC-208ENST00000536710 ZNF33AQ06730 810 aa3.44□□□□□ -1.86
PRKDC-208ENST00000536710 DNAJC3Q13217 504 aa3.44□□□□□ -1.86
PRKDC-208ENST00000536710 DGCR6Q14129 220 aa3.44□□□□□ -1.86
PRKDC-208ENST00000536710 PTGES3Q15185 160 aaKnown RBP3.44□□□□□ -1.86
PRKDC-208ENST00000536710 GABRA6Q16445 453 aa3.44□□□□□ -1.86
PRKDC-208ENST00000536710 KLHL40Q2TBA0 621 aa3.44□□□□□ -1.86
PRKDC-208ENST00000536710 ADNP2Q6IQ32 1131 aa3.44□□□□□ -1.86
PRKDC-208ENST00000536710 HORMAD1Q86X24 394 aa3.44□□□□□ -1.86
PRKDC-208ENST00000536710 CBLN2Q8IUK8 224 aa3.44□□□□□ -1.86
PRKDC-208ENST00000536710 APRG1Q8IVJ8 170 aa3.44□□□□□ -1.86
PRKDC-208ENST00000536710 MYOCDQ8IZQ8 938 aa3.44□□□□□ -1.86
PRKDC-208ENST00000536710 NPWQ8N729 165 aa3.44□□□□□ -1.86
PRKDC-208ENST00000536710 ZNF321PQ8N8H1 164 aa3.44□□□□□ -1.86
PRKDC-208ENST00000536710 MRGPRFQ96AM1 343 aa3.44□□□□□ -1.86
PRKDC-208ENST00000536710 NRBF2Q96F24 287 aa3.44□□□□□ -1.86
PRKDC-208ENST00000536710 C9orf72Q96LT7 481 aa3.44□□□□□ -1.86
PRKDC-208ENST00000536710 ZNF681Q96N22 645 aa3.44□□□□□ -1.86
PRKDC-208ENST00000536710 SAV1Q9H4B6 383 aaPredicted RBP3.44□□□□□ -1.86
PRKDC-208ENST00000536710 SYNDIG1Q9H7V2 258 aa3.44□□□□□ -1.86
PRKDC-208ENST00000536710 CYP3A43Q9HB55 503 aa3.44□□□□□ -1.86
PRKDC-208ENST00000536710 MTFP1Q9UDX5 166 aa3.44□□□□□ -1.86
PRKDC-208ENST00000536710 RHBDD3Q9Y3P4 386 aa3.44□□□□□ -1.86
PRKDC-208ENST00000536710 ATRXP46100 2492 aa3.44□□□□□ -1.86
PRKDC-208ENST00000536710 MROH7-TTC4A0A0A0MT08 1334 aa3.44□□□□□ -1.86
PRKDC-208ENST00000536710 H7C1H1 209 aa3.43□□□□□ -1.86
PRKDC-208ENST00000536710 GABRPO00591 440 aa3.43□□□□□ -1.86
PRKDC-208ENST00000536710 NME4O00746 187 aa3.43□□□□□ -1.86
PRKDC-208ENST00000536710 SNAI2O43623 268 aa3.43□□□□□ -1.86
PRKDC-208ENST00000536710 HSBP1O75506 76 aa3.43□□□□□ -1.86
PRKDC-208ENST00000536710 MED6O75586 246 aa3.43□□□□□ -1.86
PRKDC-208ENST00000536710 SCELO95171 688 aa3.43□□□□□ -1.86
PRKDC-208ENST00000536710 HPRT1P00492 218 aa3.43□□□□□ -1.86
PRKDC-208ENST00000536710 HOXC4P09017 264 aaPredicted RBP3.43□□□□□ -1.86
PRKDC-208ENST00000536710 RAB4AP20338 218 aa3.43□□□□□ -1.86
PRKDC-208ENST00000536710 MAGP20916 626 aa3.43□□□□□ -1.86
PRKDC-208ENST00000536710 SSTR5P35346 364 aa3.43□□□□□ -1.86
PRKDC-208ENST00000536710 RPS23P62266 143 aaKnown RBP3.43□□□□□ -1.86
PRKDC-208ENST00000536710 IRF4Q15306 451 aa3.43□□□□□ -1.86
PRKDC-208ENST00000536710 LCE3EQ5T5B0 92 aa3.43□□□□□ -1.86
PRKDC-208ENST00000536710 CMTM8Q8IZV2 173 aa3.43□□□□□ -1.86
PRKDC-208ENST00000536710 VKORC1L1Q8N0U8 176 aa3.43□□□□□ -1.86
PRKDC-208ENST00000536710 PROKR2Q8NFJ6 384 aa3.43□□□□□ -1.86
PRKDC-208ENST00000536710 OR11H7Q8NGC8 314 aa3.43□□□□□ -1.86
PRKDC-208ENST00000536710 OR51F2Q8NH61 342 aa3.43□□□□□ -1.86
PRKDC-208ENST00000536710 PIFOQ8TCI5 191 aa3.43□□□□□ -1.86
PRKDC-208ENST00000536710 FAM104AQ969W3 186 aa3.43□□□□□ -1.86
PRKDC-208ENST00000536710 TIMM17AQ99595 171 aa3.43□□□□□ -1.86
PRKDC-208ENST00000536710 LZTS2Q9BRK4 669 aa3.43□□□□□ -1.86
PRKDC-208ENST00000536710 RGCCQ9H4X1 137 aa3.43□□□□□ -1.86
PRKDC-208ENST00000536710 MCUBQ9NWR8 336 aa3.43□□□□□ -1.86
PRKDC-208ENST00000536710 RAB26Q9ULW5 256 aa3.43□□□□□ -1.86
PRKDC-208ENST00000536710 PSG11Q9UQ72 335 aa3.43□□□□□ -1.86
PRKDC-208ENST00000536710 GAKO14976 1311 aa3.43□□□□□ -1.86
PRKDC-208ENST00000536710 IGHV5-10-1A0A0J9YXX1 117 aa3.42□□□□□ -1.86
PRKDC-208ENST00000536710 A0A1B0GVX0 72 aa3.42□□□□□ -1.86
PRKDC-208ENST00000536710 MAGEB4O15481 346 aaPredicted RBP3.42□□□□□ -1.86
PRKDC-208ENST00000536710 IGHV1-8P0DP01 117 aa3.42□□□□□ -1.86
PRKDC-208ENST00000536710 GZMAP12544 262 aa3.42□□□□□ -1.86
PRKDC-208ENST00000536710 TCP1P17987 556 aaKnown RBP3.42□□□□□ -1.86
PRKDC-208ENST00000536710 TCN2P20062 427 aa3.42□□□□□ -1.86
PRKDC-208ENST00000536710 DTYMKP23919 212 aa3.42□□□□□ -1.86
PRKDC-208ENST00000536710 OR1G1P47890 313 aa3.42□□□□□ -1.86
PRKDC-208ENST00000536710 SERPINB8P50452 374 aa3.42□□□□□ -1.86
PRKDC-208ENST00000536710 SLAQ13239 276 aa3.42□□□□□ -1.86
PRKDC-208ENST00000536710 UBE2SQ16763 222 aa3.42□□□□□ -1.86
PRKDC-208ENST00000536710 FAM78AQ5JUQ0 283 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms