RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 ALKAL2Q6UX46 152 aa14.3□□□□□ -0.12
CHMP1A-202ENST00000535997 TMED4Q7Z7H5 227 aa14.3□□□□□ -0.12
CHMP1A-202ENST00000535997 FGGYQ96C11 551 aa14.3□□□□□ -0.12
CHMP1A-202ENST00000535997 PHF7Q9BWX1 381 aaPredicted RBP14.3□□□□□ -0.12
CHMP1A-202ENST00000535997 SLC7A5P2Q9GIP4 190 aa14.3□□□□□ -0.12
CHMP1A-202ENST00000535997 RPH3AQ9Y2J0 694 aaPredicted RBP14.3□□□□□ -0.12
CHMP1A-202ENST00000535997 LIPT2A6NK58 231 aa14.3□□□□□ -0.12
CHMP1A-202ENST00000535997 DISC1C4P0D8 188 aa14.3□□□□□ -0.12
CHMP1A-202ENST00000535997 FGL1Q08830 312 aa14.3□□□□□ -0.12
CHMP1A-202ENST00000535997 SQSTM1Q13501 440 aa14.3□□□□□ -0.12
CHMP1A-202ENST00000535997 GK2Q14410 553 aaPredicted RBP14.3□□□□□ -0.12
CHMP1A-202ENST00000535997 CORO6Q6QEF8 472 aa14.3□□□□□ -0.12
CHMP1A-202ENST00000535997 ANKRD37Q7Z713 158 aa14.3□□□□□ -0.12
CHMP1A-202ENST00000535997 ZNF584Q8IVC4 421 aa14.3□□□□□ -0.12
CHMP1A-202ENST00000535997 WDFY1Q8IWB7 410 aa14.3□□□□□ -0.12
CHMP1A-202ENST00000535997 C5orf34Q96MH7 638 aa14.3□□□□□ -0.12
CHMP1A-202ENST00000535997 CNTD2Q9H8S5 307 aa14.3□□□□□ -0.12
CHMP1A-202ENST00000535997 FAM206AQ9NX38 181 aa14.3□□□□□ -0.12
CHMP1A-202ENST00000535997 SLC2A8Q9NY64 477 aa14.3□□□□□ -0.12
CHMP1A-202ENST00000535997 MYEF2Q9P2K5 600 aaKnown RBP14.3□□□□□ -0.12
CHMP1A-202ENST00000535997 PISDQ9UG56 409 aa14.3□□□□□ -0.12
CHMP1A-202ENST00000535997 CYB5R1Q9UHQ9 305 aa14.3□□□□□ -0.12
CHMP1A-202ENST00000535997 VDAC3Q9Y277 283 aa14.3□□□□□ -0.12
CHMP1A-202ENST00000535997 KCNMB2Q9Y691 235 aa14.3□□□□□ -0.12
CHMP1A-202ENST00000535997 TMEM235A6NFC5 223 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 RAB27BO00194 218 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 TOX3O15405 576 aaPredicted RBP14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 LMX1BO60663 402 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 ALOX12BO75342 701 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 CD8AP01732 235 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 AGTR1P30556 359 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 SORDQ00796 357 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 NR0B2Q15466 257 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 ZNF260Q3ZCT1 412 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 LY6G6FQ5SQ64 297 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 LPCAT3Q6P1A2 487 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 PAPD4Q6PIY7 484 aaKnown RBP14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 KLHL24Q6TFL4 600 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 RABEPKQ7Z6M1 372 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 SLC51BQ86UW2 128 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 OR10H5Q8NGA6 315 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 COQ8AQ8NI60 647 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 THAP3Q8WTV1 239 aaPredicted RBP14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 SLC6A7Q99884 636 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 PRRT1Q99946 306 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 UQCC2Q9BRT2 126 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 TTYH1Q9H313 450 aaPredicted RBP14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 ALKBH4Q9NXW9 302 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 FARSAQ9Y285 508 aaKnown RBP14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 MRPS17Q9Y2R5 130 aaKnown RBP14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 SESN1Q9Y6P5 492 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 SDK1Q7Z5N4 2213 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 SPEGQ15772 3267 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 LOC105371267A0A1B0GV96 52 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 CPED1A4D0V7 1026 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 TMEM200CA6NKL6 621 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 MBTPS2O43462 519 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 TTRP02766 147 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 HEXBP07686 556 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 FOSL2P15408 326 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 ZP3P21754 424 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 MPZP25189 248 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 MSX1P28360 303 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 AFF3P51826 1226 aaKnown RBP14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 FOXL2P58012 376 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 SRSF4Q08170 494 aaKnown RBP14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 DHRS2Q13268 280 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 UBXN2BQ14CS0 331 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 THEM4Q5T1C6 240 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 GLRX5Q86SX6 157 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 ZNF546Q86UE3 836 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 SLC38A6Q8IZM9 456 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 SLC22A24Q8N4F4 322 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 OR5D14Q8NGL3 314 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 OR13C8Q8NGS7 320 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 C11orf40Q8WZ69 217 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 SLAMF6Q96DU3 332 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 NUDT22Q9BRQ3 303 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 MRPL13Q9BYD1 178 aaKnown RBP14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 DUSP15Q9H1R2 295 aaPredicted RBP14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 SERINC1Q9NRX5 453 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 KLHL13Q9P2N7 655 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 PFDN2Q9UHV9 154 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 KLK13Q9UKR3 277 aa14.29□□□□□ -0.12
CHMP1A-202ENST00000535997 OR14I1A6ND48 311 aa14.28□□□□□ -0.12
CHMP1A-202ENST00000535997 SCGNO76038 276 aa14.28□□□□□ -0.12
CHMP1A-202ENST00000535997 GIMD1P0DJR0 217 aa14.28□□□□□ -0.12
CHMP1A-202ENST00000535997 MYF5P13349 255 aa14.28□□□□□ -0.12
CHMP1A-202ENST00000535997 ZNF28P17035 718 aa14.28□□□□□ -0.12
CHMP1A-202ENST00000535997 MPGP29372 298 aa14.28□□□□□ -0.12
CHMP1A-202ENST00000535997 BIDP55957 195 aa14.28□□□□□ -0.12
CHMP1A-202ENST00000535997 FOXF1Q12946 379 aa14.28□□□□□ -0.12
CHMP1A-202ENST00000535997 ZNF660Q6AZW8 331 aaPredicted RBP14.28□□□□□ -0.12
CHMP1A-202ENST00000535997 PAQR4Q8N4S7 273 aaPredicted RBP14.28□□□□□ -0.12
CHMP1A-202ENST00000535997 OR5M9Q8NGP3 310 aa14.28□□□□□ -0.12
CHMP1A-202ENST00000535997 RNF138Q8WVD3 245 aa14.28□□□□□ -0.12
CHMP1A-202ENST00000535997 DNASE2BQ8WZ79 361 aa14.28□□□□□ -0.12
CHMP1A-202ENST00000535997 MRGPRX4Q96LA9 322 aa14.28□□□□□ -0.12
CHMP1A-202ENST00000535997 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.27□□□□□ -0.12
CHMP1A-202ENST00000535997 A0A1B0GTI1 187 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms