RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 DDOQ99489 341 aa13.98□□□□□ -0.17
ATL3-202ENST00000535789 IFT27Q9BW83 186 aa13.98□□□□□ -0.17
ATL3-202ENST00000535789 OR2J1Q9GZK6 312 aa13.98□□□□□ -0.17
ATL3-202ENST00000535789 NDEL1Q9GZM8 345 aa13.98□□□□□ -0.17
ATL3-202ENST00000535789 VCXQ9H320 206 aa13.98□□□□□ -0.17
ATL3-202ENST00000535789 B9D1Q9UPM9 204 aa13.98□□□□□ -0.17
ATL3-202ENST00000535789 CDH10Q9Y6N8 788 aa13.98□□□□□ -0.17
ATL3-202ENST00000535789 ARHGAP32A7KAX9 2087 aa13.98□□□□□ -0.17
ATL3-202ENST00000535789 ZSCAN5BA6NJL1 495 aa13.97□□□□□ -0.17
ATL3-202ENST00000535789 C12orf71A8MTZ7 269 aa13.97□□□□□ -0.17
ATL3-202ENST00000535789 C17orf100A8MU93 164 aa13.97□□□□□ -0.17
ATL3-202ENST00000535789 KIAA1324LA8MWY0 1029 aaPredicted RBP13.97□□□□□ -0.17
ATL3-202ENST00000535789 WNT9BO14905 357 aa13.97□□□□□ -0.17
ATL3-202ENST00000535789 RER1O15258 196 aa13.97□□□□□ -0.17
ATL3-202ENST00000535789 SGCEO43556 437 aa13.97□□□□□ -0.17
ATL3-202ENST00000535789 TFP02787 698 aa13.97□□□□□ -0.17
ATL3-202ENST00000535789 DBHP09172 617 aa13.97□□□□□ -0.17
ATL3-202ENST00000535789 TACSTD2P09758 323 aa13.97□□□□□ -0.17
ATL3-202ENST00000535789 RAD52P43351 418 aa13.97□□□□□ -0.17
ATL3-202ENST00000535789 HTR5AP47898 357 aa13.97□□□□□ -0.17
ATL3-202ENST00000535789 MMP15P51511 669 aa13.97□□□□□ -0.17
ATL3-202ENST00000535789 PCBD1P61457 104 aa13.97□□□□□ -0.17
ATL3-202ENST00000535789 HIST1H3AP68431 136 aa13.97□□□□□ -0.17
ATL3-202ENST00000535789 SCRN3Q0VDG4 424 aa13.97□□□□□ -0.17
ATL3-202ENST00000535789 NKPD1Q17RQ9 610 aa13.97□□□□□ -0.17
ATL3-202ENST00000535789 SPRNQ5BIV9 151 aa13.97□□□□□ -0.17
ATL3-202ENST00000535789 CLEC12AQ5QGZ9 265 aa13.97□□□□□ -0.17
ATL3-202ENST00000535789 ZNF362Q5T0B9 420 aaPredicted RBP13.97□□□□□ -0.17
ATL3-202ENST00000535789 HIST2H3PS2Q5TEC6 136 aa13.97□□□□□ -0.17
ATL3-202ENST00000535789 HIST2H3AQ71DI3 136 aa13.97□□□□□ -0.17
ATL3-202ENST00000535789 PARP8Q8N3A8 854 aa13.97□□□□□ -0.17
ATL3-202ENST00000535789 SLC26A10Q8NG04 563 aa13.97□□□□□ -0.17
ATL3-202ENST00000535789 MSI2Q96DH6 328 aaKnown RBP13.97□□□□□ -0.17
ATL3-202ENST00000535789 RDH12Q96NR8 316 aa13.97□□□□□ -0.17
ATL3-202ENST00000535789 SNX18Q96RF0 628 aa13.97□□□□□ -0.17
ATL3-202ENST00000535789 MBOAT4Q96T53 435 aa13.97□□□□□ -0.17
ATL3-202ENST00000535789 RACGAP1Q9H0H5 632 aa13.97□□□□□ -0.17
ATL3-202ENST00000535789 MS4A5Q9H3V2 200 aa13.97□□□□□ -0.17
ATL3-202ENST00000535789 RPRD1BQ9NQG5 326 aaKnown RBP13.97□□□□□ -0.17
ATL3-202ENST00000535789 PAPOLBQ9NRJ5 636 aaKnown RBP13.97□□□□□ -0.17
ATL3-202ENST00000535789 KRT84Q9NSB2 600 aa13.97□□□□□ -0.17
ATL3-202ENST00000535789 SMPD3Q9NY59 655 aaPredicted RBP13.97□□□□□ -0.17
ATL3-202ENST00000535789 ATRQ13535 2644 aa13.96□□□□□ -0.17
ATL3-202ENST00000535789 E9PQ18 207 aa13.96□□□□□ -0.17
ATL3-202ENST00000535789 COX5BP10606 129 aa13.96□□□□□ -0.17
ATL3-202ENST00000535789 ANOS1P23352 680 aa13.96□□□□□ -0.17
ATL3-202ENST00000535789 RBMXP38159 391 aaKnown RBP13.96□□□□□ -0.17
ATL3-202ENST00000535789 PPP1CBP62140 327 aa13.96□□□□□ -0.17
ATL3-202ENST00000535789 LSM6P62312 80 aaKnown RBP13.96□□□□□ -0.17
ATL3-202ENST00000535789 MBNL2Q5VZF2 373 aaKnown RBP13.96□□□□□ -0.17
ATL3-202ENST00000535789 CORO6Q6QEF8 472 aa13.96□□□□□ -0.17
ATL3-202ENST00000535789 LYPD4Q6UWN0 246 aa13.96□□□□□ -0.17
ATL3-202ENST00000535789 ZBTB46Q86UZ6 589 aa13.96□□□□□ -0.17
ATL3-202ENST00000535789 NPEPL1Q8NDH3 523 aa13.96□□□□□ -0.17
ATL3-202ENST00000535789 OR4Q3Q8NH05 313 aa13.96□□□□□ -0.17
ATL3-202ENST00000535789 KLF14Q8TD94 323 aaPredicted RBP13.96□□□□□ -0.17
ATL3-202ENST00000535789 C4orf45Q96LM5 186 aa13.96□□□□□ -0.17
ATL3-202ENST00000535789 GABARAPL3Q9BY60 117 aa13.96□□□□□ -0.17
ATL3-202ENST00000535789 ZNF556Q9HAH1 456 aa13.96□□□□□ -0.17
ATL3-202ENST00000535789 HINT3Q9NQE9 182 aaKnown RBP13.96□□□□□ -0.17
ATL3-202ENST00000535789 ZNF275Q9NSD4 429 aaPredicted RBP13.96□□□□□ -0.17
ATL3-202ENST00000535789 MRPL22Q9NWU5 206 aaKnown RBP13.96□□□□□ -0.17
ATL3-202ENST00000535789 IL20Q9NYY1 176 aa13.96□□□□□ -0.17
ATL3-202ENST00000535789 CACNG2Q9Y698 323 aa13.96□□□□□ -0.17
ATL3-202ENST00000535789 A8MV72 311 aaPredicted RBP13.95□□□□□ -0.18
ATL3-202ENST00000535789 SOX14O95416 240 aa13.95□□□□□ -0.18
ATL3-202ENST00000535789 GSTM3P21266 225 aa13.95□□□□□ -0.18
ATL3-202ENST00000535789 CCL8P80075 99 aa13.95□□□□□ -0.18
ATL3-202ENST00000535789 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.95□□□□□ -0.18
ATL3-202ENST00000535789 COX10Q12887 443 aa13.95□□□□□ -0.18
ATL3-202ENST00000535789 SLC35F1Q5T1Q4 408 aa13.95□□□□□ -0.18
ATL3-202ENST00000535789 CFAP77Q6ZQR2 320 aa13.95□□□□□ -0.18
ATL3-202ENST00000535789 RASSF6Q6ZTQ3 369 aa13.95□□□□□ -0.18
ATL3-202ENST00000535789 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.95□□□□□ -0.18
ATL3-202ENST00000535789 JAZF1Q86VZ6 243 aa13.95□□□□□ -0.18
ATL3-202ENST00000535789 ALDH16A1Q8IZ83 802 aa13.95□□□□□ -0.18
ATL3-202ENST00000535789 CYB561A3Q8NBI2 242 aa13.95□□□□□ -0.18
ATL3-202ENST00000535789 ZNF184Q99676 751 aaPredicted RBP13.95□□□□□ -0.18
ATL3-202ENST00000535789 WACQ9BTA9 647 aa13.95□□□□□ -0.18
ATL3-202ENST00000535789 TOR3AQ9H497 397 aa13.95□□□□□ -0.18
ATL3-202ENST00000535789 SRA1Q9HD15 236 aaKnown RBP13.95□□□□□ -0.18
ATL3-202ENST00000535789 PLEK2Q9NYT0 353 aa13.95□□□□□ -0.18
ATL3-202ENST00000535789 NDRG4Q9ULP0 352 aaKnown RBP13.95□□□□□ -0.18
ATL3-202ENST00000535789 ABHD16AO95870 558 aa13.94□□□□□ -0.18
ATL3-202ENST00000535789 IGHV1-46P01743 117 aa13.94□□□□□ -0.18
ATL3-202ENST00000535789 ERCC1P07992 297 aaPredicted RBP13.94□□□□□ -0.18
ATL3-202ENST00000535789 OSMP13725 252 aa13.94□□□□□ -0.18
ATL3-202ENST00000535789 ACHEP22303 614 aa13.94□□□□□ -0.18
ATL3-202ENST00000535789 CRABP1P29762 137 aa13.94□□□□□ -0.18
ATL3-202ENST00000535789 GUCA1AP43080 201 aaPredicted RBP13.94□□□□□ -0.18
ATL3-202ENST00000535789 RAD23AP54725 363 aa13.94□□□□□ -0.18
ATL3-202ENST00000535789 RSPO1Q2MKA7 263 aaPredicted RBP13.94□□□□□ -0.18
ATL3-202ENST00000535789 KRTAP27-1Q3LI81 207 aa13.94□□□□□ -0.18
ATL3-202ENST00000535789 ZIK1Q3SY52 487 aaPredicted RBP13.94□□□□□ -0.18
ATL3-202ENST00000535789 CYB5R2Q6BCY4 276 aa13.94□□□□□ -0.18
ATL3-202ENST00000535789 LINC00346Q8IVM7 164 aa13.94□□□□□ -0.18
ATL3-202ENST00000535789 OR52E2Q8NGJ4 325 aa13.94□□□□□ -0.18
ATL3-202ENST00000535789 RDH5Q92781 318 aa13.94□□□□□ -0.18
ATL3-202ENST00000535789 CHODLQ9H9P2 273 aa13.94□□□□□ -0.18
ATL3-202ENST00000535789 PNRC2Q9NPJ4 139 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms