RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 OR10H3O60404 316 aa13.67□□□□□ -0.22
CLSTN3-204ENST00000535313 FOXH1O75593 365 aa13.67□□□□□ -0.22
CLSTN3-204ENST00000535313 RGS9O75916 674 aaPredicted RBP13.67□□□□□ -0.22
CLSTN3-204ENST00000535313 RENP00797 406 aa13.67□□□□□ -0.22
CLSTN3-204ENST00000535313 IGHV2-70P01814 119 aa13.67□□□□□ -0.22
CLSTN3-204ENST00000535313 DBHP09172 617 aa13.67□□□□□ -0.22
CLSTN3-204ENST00000535313 FPR3P25089 353 aa13.67□□□□□ -0.22
CLSTN3-204ENST00000535313 NOS3P29474 1203 aa13.67□□□□□ -0.22
CLSTN3-204ENST00000535313 LEG1Q6P5S2 330 aa13.67□□□□□ -0.22
CLSTN3-204ENST00000535313 USP43Q70EL4 1123 aa13.67□□□□□ -0.22
CLSTN3-204ENST00000535313 PGAM4Q8N0Y7 254 aa13.67□□□□□ -0.22
CLSTN3-204ENST00000535313 KLHL36Q8N4N3 616 aa13.67□□□□□ -0.22
CLSTN3-204ENST00000535313 ZNF283Q8N7M2 679 aa13.67□□□□□ -0.22
CLSTN3-204ENST00000535313 ATG16L2Q8NAA4 619 aa13.67□□□□□ -0.22
CLSTN3-204ENST00000535313 SEMA6DQ8NFY4 1073 aa13.67□□□□□ -0.22
CLSTN3-204ENST00000535313 ITLN1Q8WWA0 313 aa13.67□□□□□ -0.22
CLSTN3-204ENST00000535313 APOBEC3DQ96AK3 386 aaPredicted RBP13.67□□□□□ -0.22
CLSTN3-204ENST00000535313 TSSK2Q96PF2 358 aa13.67□□□□□ -0.22
CLSTN3-204ENST00000535313 JMJD8Q96S16 334 aa13.67□□□□□ -0.22
CLSTN3-204ENST00000535313 CCT8L2Q96SF2 557 aa13.67□□□□□ -0.22
CLSTN3-204ENST00000535313 COQ7Q99807 217 aa13.67□□□□□ -0.22
CLSTN3-204ENST00000535313 IFT27Q9BW83 186 aa13.67□□□□□ -0.22
CLSTN3-204ENST00000535313 HDHD2Q9H0R4 259 aa13.67□□□□□ -0.22
CLSTN3-204ENST00000535313 OR52D1Q9H346 318 aa13.67□□□□□ -0.22
CLSTN3-204ENST00000535313 SRA1Q9HD15 236 aaKnown RBP13.67□□□□□ -0.22
CLSTN3-204ENST00000535313 DCAF16Q9NXF7 216 aa13.67□□□□□ -0.22
CLSTN3-204ENST00000535313 PTTG3PQ9NZH4 202 aa13.67□□□□□ -0.22
CLSTN3-204ENST00000535313 IL19Q9UHD0 177 aa13.67□□□□□ -0.22
CLSTN3-204ENST00000535313 TMCC3Q9ULS5 477 aa13.67□□□□□ -0.22
CLSTN3-204ENST00000535313 B9D1Q9UPM9 204 aa13.67□□□□□ -0.22
CLSTN3-204ENST00000535313 PPP1R3CQ9UQK1 317 aa13.67□□□□□ -0.22
CLSTN3-204ENST00000535313 TANC2Q9HCD6 1990 aa13.66□□□□□ -0.22
CLSTN3-204ENST00000535313 ARPC3O15145 178 aa13.66□□□□□ -0.22
CLSTN3-204ENST00000535313 GPANK1O95872 356 aa13.66□□□□□ -0.22
CLSTN3-204ENST00000535313 SEMG1P04279 462 aa13.66□□□□□ -0.22
CLSTN3-204ENST00000535313 FABP3P05413 133 aa13.66□□□□□ -0.22
CLSTN3-204ENST00000535313 ADRA2CP18825 462 aa13.66□□□□□ -0.22
CLSTN3-204ENST00000535313 BTG1P62324 171 aa13.66□□□□□ -0.22
CLSTN3-204ENST00000535313 HLXQ14774 488 aaPredicted RBP13.66□□□□□ -0.22
CLSTN3-204ENST00000535313 MEP1BQ16820 701 aa13.66□□□□□ -0.22
CLSTN3-204ENST00000535313 TMEM155Q4W5P6 130 aa13.66□□□□□ -0.22
CLSTN3-204ENST00000535313 SLC27A4Q6P1M0 643 aa13.66□□□□□ -0.22
CLSTN3-204ENST00000535313 C12orf54Q6X4T0 127 aa13.66□□□□□ -0.22
CLSTN3-204ENST00000535313 FBXW12Q6X9E4 464 aa13.66□□□□□ -0.22
CLSTN3-204ENST00000535313 OR5AS1Q8N127 324 aa13.66□□□□□ -0.22
CLSTN3-204ENST00000535313 OR6V1Q8N148 313 aa13.66□□□□□ -0.22
CLSTN3-204ENST00000535313 OR4K13Q8NH42 304 aa13.66□□□□□ -0.22
CLSTN3-204ENST00000535313 ZNF582Q96NG8 517 aaPredicted RBP13.66□□□□□ -0.22
CLSTN3-204ENST00000535313 OR2V2Q96R30 315 aa13.66□□□□□ -0.22
CLSTN3-204ENST00000535313 CDRT15Q96T59 188 aa13.66□□□□□ -0.22
CLSTN3-204ENST00000535313 NMNAT3Q96T66 252 aa13.66□□□□□ -0.22
CLSTN3-204ENST00000535313 TAGLN3Q9UI15 199 aa13.66□□□□□ -0.22
CLSTN3-204ENST00000535313 LHFPL6Q9Y693 200 aa13.66□□□□□ -0.22
CLSTN3-204ENST00000535313 DYSFO75923 2080 aa13.65□□□□□ -0.22
CLSTN3-204ENST00000535313 PPIAL4EA0A075B759 164 aa13.65□□□□□ -0.22
CLSTN3-204ENST00000535313 IGLV1-36A0A0B4J1U3 117 aa13.65□□□□□ -0.22
CLSTN3-204ENST00000535313 PPIAL4CA0A0B4J2A2 164 aa13.65□□□□□ -0.22
CLSTN3-204ENST00000535313 PPIAL4DF5H284 164 aa13.65□□□□□ -0.22
CLSTN3-204ENST00000535313 TRIM77I1YAP6 450 aa13.65□□□□□ -0.22
CLSTN3-204ENST00000535313 DCTN6O00399 190 aa13.65□□□□□ -0.22
CLSTN3-204ENST00000535313 ARPC2O15144 300 aa13.65□□□□□ -0.22
CLSTN3-204ENST00000535313 PPIAL4FP0DN26 164 aa13.65□□□□□ -0.22
CLSTN3-204ENST00000535313 HIST1H1CP16403 213 aaKnown RBP13.65□□□□□ -0.22
CLSTN3-204ENST00000535313 RRM2P31350 389 aa13.65□□□□□ -0.22
CLSTN3-204ENST00000535313 MSX2P35548 267 aaPredicted RBP13.65□□□□□ -0.22
CLSTN3-204ENST00000535313 ERFP50548 548 aa13.65□□□□□ -0.22
CLSTN3-204ENST00000535313 HILS1P60008 231 aa13.65□□□□□ -0.22
CLSTN3-204ENST00000535313 ACTG1P63261 375 aa13.65□□□□□ -0.22
CLSTN3-204ENST00000535313 COX10Q12887 443 aa13.65□□□□□ -0.22
CLSTN3-204ENST00000535313 HNRNPA0Q13151 305 aaKnown RBP13.65□□□□□ -0.22
CLSTN3-204ENST00000535313 SLC36A3Q495N2 470 aa13.65□□□□□ -0.22
CLSTN3-204ENST00000535313 OR2T2Q6IF00 324 aa13.65□□□□□ -0.22
CLSTN3-204ENST00000535313 CORO6Q6QEF8 472 aa13.65□□□□□ -0.22
CLSTN3-204ENST00000535313 LRRC28Q86X40 367 aaPredicted RBP13.65□□□□□ -0.22
CLSTN3-204ENST00000535313 BPIFB2Q8N4F0 458 aa13.65□□□□□ -0.22
CLSTN3-204ENST00000535313 OR13G1Q8NGZ3 307 aa13.65□□□□□ -0.22
CLSTN3-204ENST00000535313 CDADC1Q9BWV3 514 aa13.65□□□□□ -0.22
CLSTN3-204ENST00000535313 SUCNR1Q9BXA5 334 aa13.65□□□□□ -0.22
CLSTN3-204ENST00000535313 RPRD1BQ9NQG5 326 aaKnown RBP13.65□□□□□ -0.22
CLSTN3-204ENST00000535313 NDE1Q9NXR1 346 aa13.65□□□□□ -0.22
CLSTN3-204ENST00000535313 CD300AQ9UGN4 299 aa13.65□□□□□ -0.22
CLSTN3-204ENST00000535313 IFNL4K9M1U5 179 aa13.64□□□□□ -0.23
CLSTN3-204ENST00000535313 IDH3BO43837 385 aa13.64□□□□□ -0.23
CLSTN3-204ENST00000535313 FAM107AO95990 144 aa13.64□□□□□ -0.23
CLSTN3-204ENST00000535313 HLA-DQA2P01906 255 aa13.64□□□□□ -0.23
CLSTN3-204ENST00000535313 ZFP36P26651 326 aaKnown RBP13.64□□□□□ -0.23
CLSTN3-204ENST00000535313 HIST1H3AP68431 136 aa13.64□□□□□ -0.23
CLSTN3-204ENST00000535313 MXRA7P84157 204 aa13.64□□□□□ -0.23
CLSTN3-204ENST00000535313 ECH1Q13011 328 aa13.64□□□□□ -0.23
CLSTN3-204ENST00000535313 ZMYND11Q15326 602 aa13.64□□□□□ -0.23
CLSTN3-204ENST00000535313 HIST2H3PS2Q5TEC6 136 aa13.64□□□□□ -0.23
CLSTN3-204ENST00000535313 C16orf89Q6UX73 402 aa13.64□□□□□ -0.23
CLSTN3-204ENST00000535313 HIST2H3AQ71DI3 136 aa13.64□□□□□ -0.23
CLSTN3-204ENST00000535313 SLC26A10Q8NG04 563 aa13.64□□□□□ -0.23
CLSTN3-204ENST00000535313 OR8G5Q8NG78 346 aa13.64□□□□□ -0.23
CLSTN3-204ENST00000535313 OR2AJ1Q8NGZ0 328 aa13.64□□□□□ -0.23
CLSTN3-204ENST00000535313 GNPDA2Q8TDQ7 276 aa13.64□□□□□ -0.23
CLSTN3-204ENST00000535313 PITX2Q99697 317 aa13.64□□□□□ -0.23
CLSTN3-204ENST00000535313 HCAR1Q9BXC0 346 aa13.64□□□□□ -0.23
CLSTN3-204ENST00000535313 PATZ1Q9HBE1 687 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms