RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 WDFY1Q8IWB7 410 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 MICU2Q8IYU8 434 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 FAM169BQ8N8A8 192 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 OR4F15Q8NGB8 312 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 OR5T2Q8NGG2 359 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 OR6N1Q8NGY5 312 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 OR5J2Q8NH18 312 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 OR5K1Q8NHB7 308 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 PTP4A1Q93096 173 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 SORCS2Q96PQ0 1159 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 VRK1Q99986 396 aaPredicted RBP7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 ULBP2Q9BZM5 246 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 RACGAP1Q9H0H5 632 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 PLSCR3Q9NRY6 295 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 MBD2Q9UBB5 411 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 SLC7A7Q9UM01 511 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 POFUT2Q9Y2G5 429 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 PRELID3BQ9Y3B1 194 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 ARFGEF3Q5TH69 2177 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 CSPG4Q6UVK1 2322 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 A0A096LNT2 108 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 IGHV2OR16-5A0A0B4J2B6 119 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 TRAPPC13A5PLN9 417 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 B9A039 149 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 RNF13O43567 381 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 OR5F1O95221 314 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 LYPD3O95274 346 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 SNAPINO95295 136 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 ECDO95905 644 aaPredicted RBP7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 CH25HO95992 272 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 F12P00748 615 aaPredicted RBP7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 IFNA14P01570 189 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 HLA-HP01893 362 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 THY1P04216 161 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 OR4A8P0C604 315 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 CD79AP11912 226 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 IFNGR1P15260 489 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 B4GALT1P15291 398 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 ZP3P21754 424 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 MYL9P24844 172 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 PTBP1P26599 531 aaKnown RBP eCLIP7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 PSMB9P28065 219 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 THBS4P35443 961 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 ARR3P36575 388 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 RFX2P48378 723 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 CSNK1A1P48729 337 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 PDLIM4P50479 330 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 GZMMP51124 257 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 BIDP55957 195 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 LIPEQ05469 1076 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 PIGFQ07326 219 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 MAB21L1Q13394 359 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 MELKQ14680 651 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 ADIPOQQ15848 244 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 ZNF74Q16587 644 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 TMEM249Q2WGJ8 235 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 KLHL12Q53G59 568 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 RABL3Q5HYI8 236 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 NXNL2Q5VZ03 156 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 KDM4DQ6B0I6 523 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 TBPL2Q6SJ96 375 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 LINC00114Q6XXX2 140 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 GDPGP1Q6ZNW5 385 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 NRARPQ7Z6K4 114 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 PXKQ7Z7A4 578 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 TSPYL5Q86VY4 417 aaPredicted RBP7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 CCDC36Q8IYA8 594 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 NUP37Q8NFH4 326 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 C10orf105Q8TEF2 133 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 NANOS1Q8WY41 292 aaKnown RBP7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 LRR1Q96L50 414 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 TNFRSF13CQ96RJ3 184 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 DCLRE1CQ96SD1 692 aaKnown RBP7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 SDHCQ99643 169 aaPredicted RBP7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 GORASP2Q9H8Y8 452 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 RNF121Q9H920 327 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 NOX3Q9HBY0 568 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 NANSQ9NR45 359 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 PLCXD1Q9NUJ7 323 aa7.4□□□□□ -1.22
SFSWAP-202ENST00000535202 ABCA1O95477 2261 aa7.4□□□□□ -1.23
SFSWAP-202ENST00000535202 NSD1Q96L73 2696 aaPredicted RBP7.4□□□□□ -1.23
SFSWAP-202ENST00000535202 YLPM1P49750 1951 aaKnown RBP7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 A8MV72 311 aaPredicted RBP7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 VSTM5A8MXK1 200 aa7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 PTP4A3O75365 173 aa7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 IFNA7P01567 189 aa7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 HIST1H2ABP04908 130 aa7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 TNFRSF1BP20333 461 aa7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 NPR2P20594 1047 aa7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 USF1P22415 310 aaPredicted RBP7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 PPOXP50336 477 aa7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 CRYBA2P53672 197 aa7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 TAS2R41P59536 307 aa7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 HGFACQ04756 655 aa7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 LOXL1Q08397 574 aaPredicted RBP7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 SNTB2Q13425 540 aaKnown RBP7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 GGTLC2Q14390 218 aa7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 EFNB3Q15768 340 aa7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 GRK1Q15835 563 aa7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 GSG1Q2KHT4 349 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms