RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 SORCS2Q96PQ0 1159 aa12.04□□□□□ -0.48
VPS11-205ENST00000534551 INTS14Q96SY0 518 aa12.04□□□□□ -0.48
VPS11-205ENST00000534551 COQ7Q99807 217 aa12.04□□□□□ -0.48
VPS11-205ENST00000534551 ATF6BQ99941 703 aa12.04□□□□□ -0.48
VPS11-205ENST00000534551 CDADC1Q9BWV3 514 aa12.04□□□□□ -0.48
VPS11-205ENST00000534551 GSX2Q9BZM3 304 aa12.04□□□□□ -0.48
VPS11-205ENST00000534551 OR2J1Q9GZK6 312 aa12.04□□□□□ -0.48
VPS11-205ENST00000534551 HDHD2Q9H0R4 259 aa12.04□□□□□ -0.48
VPS11-205ENST00000534551 TPK1Q9H3S4 243 aa12.04□□□□□ -0.48
VPS11-205ENST00000534551 DNAJC27Q9NZQ0 273 aa12.04□□□□□ -0.48
VPS11-205ENST00000534551 GRIP1Q9Y3R0 1128 aa12.04□□□□□ -0.48
VPS11-205ENST00000534551 CMAHPQ9Y471 501 aa12.04□□□□□ -0.48
VPS11-205ENST00000534551 TANC2Q9HCD6 1990 aa12.03□□□□□ -0.48
VPS11-205ENST00000534551 PRODHO43272 600 aa12.03□□□□□ -0.48
VPS11-205ENST00000534551 COX5BP10606 129 aa12.03□□□□□ -0.48
VPS11-205ENST00000534551 PCSK6P29122 969 aa12.03□□□□□ -0.48
VPS11-205ENST00000534551 PPP1CBP62140 327 aa12.03□□□□□ -0.48
VPS11-205ENST00000534551 EIF2B1Q14232 305 aaKnown RBP12.03□□□□□ -0.48
VPS11-205ENST00000534551 RSPO1Q2MKA7 263 aaPredicted RBP12.03□□□□□ -0.48
VPS11-205ENST00000534551 KRTAP27-1Q3LI81 207 aa12.03□□□□□ -0.48
VPS11-205ENST00000534551 ZBTB49Q6ZSB9 765 aa12.03□□□□□ -0.48
VPS11-205ENST00000534551 NAA40Q86UY6 237 aa12.03□□□□□ -0.48
VPS11-205ENST00000534551 C10orf67Q8IYJ2 551 aa12.03□□□□□ -0.48
VPS11-205ENST00000534551 GALNT4Q8N4A0 578 aa12.03□□□□□ -0.48
VPS11-205ENST00000534551 TMEM163Q8TC26 289 aa12.03□□□□□ -0.48
VPS11-205ENST00000534551 SLAMF6Q96DU3 332 aa12.03□□□□□ -0.48
VPS11-205ENST00000534551 WACQ9BTA9 647 aa12.03□□□□□ -0.48
VPS11-205ENST00000534551 TEX12Q9BXU0 123 aa12.03□□□□□ -0.48
VPS11-205ENST00000534551 MARCH7Q9H992 704 aa12.03□□□□□ -0.48
VPS11-205ENST00000534551 NKX1-2Q9UD57 310 aaPredicted RBP12.03□□□□□ -0.48
VPS11-205ENST00000534551 DUSP13Q9UII6 198 aa12.03□□□□□ -0.48
VPS11-205ENST00000534551 EDARQ9UNE0 448 aa12.03□□□□□ -0.48
VPS11-205ENST00000534551 SPEF1Q9Y4P9 236 aa12.03□□□□□ -0.48
VPS11-205ENST00000534551 MED13LQ71F56 2210 aa12.02□□□□□ -0.48
VPS11-205ENST00000534551 A0A1W2PPW3 197 aa12.02□□□□□ -0.49
VPS11-205ENST00000534551 PRR32B1ATL7 298 aa12.02□□□□□ -0.49
VPS11-205ENST00000534551 E9PQ18 207 aa12.02□□□□□ -0.49
VPS11-205ENST00000534551 F5H5K5 113 aa12.02□□□□□ -0.49
VPS11-205ENST00000534551 DLGAP1O14490 977 aa12.02□□□□□ -0.49
VPS11-205ENST00000534551 SLC2A1P11166 492 aa12.02□□□□□ -0.49
VPS11-205ENST00000534551 NAT2P11245 290 aa12.02□□□□□ -0.49
VPS11-205ENST00000534551 RPS23P62266 143 aaKnown RBP12.02□□□□□ -0.49
VPS11-205ENST00000534551 EFNB1P98172 346 aa12.02□□□□□ -0.49
VPS11-205ENST00000534551 HNRNPA0Q13151 305 aaKnown RBP12.02□□□□□ -0.49
VPS11-205ENST00000534551 PCK2Q16822 640 aa12.02□□□□□ -0.49
VPS11-205ENST00000534551 AADACL4Q5VUY2 407 aa12.02□□□□□ -0.49
VPS11-205ENST00000534551 SHFQ7M4L6 423 aa12.02□□□□□ -0.49
VPS11-205ENST00000534551 DOK1Q99704 481 aa12.02□□□□□ -0.49
VPS11-205ENST00000534551 PRRG3Q9BZD7 231 aa12.02□□□□□ -0.49
VPS11-205ENST00000534551 BCL2L14Q9BZR8 327 aa12.02□□□□□ -0.49
VPS11-205ENST00000534551 DYNLRB1Q9NP97 96 aa12.02□□□□□ -0.49
VPS11-205ENST00000534551 CENPMQ9NSP4 180 aa12.02□□□□□ -0.49
VPS11-205ENST00000534551 DDX28Q9NUL7 540 aaKnown RBP12.02□□□□□ -0.49
VPS11-205ENST00000534551 PTTG3PQ9NZH4 202 aa12.02□□□□□ -0.49
VPS11-205ENST00000534551 ENOPH1Q9UHY7 261 aa12.02□□□□□ -0.49
VPS11-205ENST00000534551 ORC6Q9Y5N6 252 aa12.02□□□□□ -0.49
VPS11-205ENST00000534551 F8P00451 2351 aa12.01□□□□□ -0.49
VPS11-205ENST00000534551 FLNAP21333 2647 aaKnown RBP12.01□□□□□ -0.49
VPS11-205ENST00000534551 TRIM64A6NGJ6 449 aa12.01□□□□□ -0.49
VPS11-205ENST00000534551 TRIM64BA6NI03 449 aa12.01□□□□□ -0.49
VPS11-205ENST00000534551 B9A039 149 aa12.01□□□□□ -0.49
VPS11-205ENST00000534551 PSMD9O00233 223 aa12.01□□□□□ -0.49
VPS11-205ENST00000534551 ICMTO60725 284 aa12.01□□□□□ -0.49
VPS11-205ENST00000534551 ADRA2AP08913 450 aa12.01□□□□□ -0.49
VPS11-205ENST00000534551 ACSM4P0C7M7 580 aa12.01□□□□□ -0.49
VPS11-205ENST00000534551 PAX1P15863 534 aa12.01□□□□□ -0.49
VPS11-205ENST00000534551 RAD52P43351 418 aa12.01□□□□□ -0.49
VPS11-205ENST00000534551 RAD23AP54725 363 aa12.01□□□□□ -0.49
VPS11-205ENST00000534551 HLXQ14774 488 aaPredicted RBP12.01□□□□□ -0.49
VPS11-205ENST00000534551 SNAI3Q3KNW1 292 aa12.01□□□□□ -0.49
VPS11-205ENST00000534551 SLC35D3Q5M8T2 416 aa12.01□□□□□ -0.49
VPS11-205ENST00000534551 LRRC75A-AS1Q8N1F1 130 aa12.01□□□□□ -0.49
VPS11-205ENST00000534551 MARS2Q96GW9 593 aaKnown RBP12.01□□□□□ -0.49
VPS11-205ENST00000534551 Q96MF0 132 aa12.01□□□□□ -0.49
VPS11-205ENST00000534551 VRK1Q99986 396 aaPredicted RBP12.01□□□□□ -0.49
VPS11-205ENST00000534551 COPS4Q9BT78 406 aa12.01□□□□□ -0.49
VPS11-205ENST00000534551 ABHD6Q9BV23 337 aa12.01□□□□□ -0.49
VPS11-205ENST00000534551 TAAR3PQ9P1P4 343 aa12.01□□□□□ -0.49
VPS11-205ENST00000534551 EIF3KQ9UBQ5 218 aaKnown RBP12.01□□□□□ -0.49
VPS11-205ENST00000534551 COPS3Q9UNS2 423 aa12.01□□□□□ -0.49
VPS11-205ENST00000534551 STARD10Q9Y365 291 aa12.01□□□□□ -0.49
VPS11-205ENST00000534551 IGLV3-9A0A075B6K5 115 aa12□□□□□ -0.49
VPS11-205ENST00000534551 ZNF878C9JN71 531 aa12□□□□□ -0.49
VPS11-205ENST00000534551 H7C417 338 aa12□□□□□ -0.49
VPS11-205ENST00000534551 M0R135 149 aa12□□□□□ -0.49
VPS11-205ENST00000534551 M0R233 179 aa12□□□□□ -0.49
VPS11-205ENST00000534551 NCR1O76036 304 aa12□□□□□ -0.49
VPS11-205ENST00000534551 ZNF250P15622 560 aa12□□□□□ -0.49
VPS11-205ENST00000534551 SLC6A9P48067 706 aa12□□□□□ -0.49
VPS11-205ENST00000534551 PRKXP51817 358 aa12□□□□□ -0.49
VPS11-205ENST00000534551 KLF3P57682 345 aaPredicted RBP12□□□□□ -0.49
VPS11-205ENST00000534551 TEX30Q5JUR7 227 aa12□□□□□ -0.49
VPS11-205ENST00000534551 NXNL2Q5VZ03 156 aa12□□□□□ -0.49
VPS11-205ENST00000534551 ZNF525Q8N782 197 aa12□□□□□ -0.49
VPS11-205ENST00000534551 OTOSQ8NHW6 89 aa12□□□□□ -0.49
VPS11-205ENST00000534551 SYNPRQ8TBG9 265 aa12□□□□□ -0.49
VPS11-205ENST00000534551 KLF14Q8TD94 323 aaPredicted RBP12□□□□□ -0.49
VPS11-205ENST00000534551 ZNF799Q96GE5 643 aa12□□□□□ -0.49
VPS11-205ENST00000534551 HRASLS5Q96KN8 279 aa12□□□□□ -0.49
VPS11-205ENST00000534551 ZNF582Q96NG8 517 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms