RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 ZNF141Q15928 474 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 LY6EQ16553 131 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 FAM83EQ2M2I3 478 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 PCGF3Q3KNV8 242 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 ARHGAP11BQ3KRB8 267 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 GGTA1PQ4G0N0 100 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 ZNF585BQ52M93 769 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 ESCO2Q56NI9 601 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 RNASE12Q5GAN4 147 aaKnown RBP2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 INTS11Q5TA45 600 aaKnown RBP2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 GRTP1Q5TC63 336 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 GPR157Q5UAW9 335 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 AP1ARQ63HQ0 302 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 REP15Q6BDI9 236 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 DHRS7BQ6IAN0 325 aaPredicted RBP2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 CCDC144NLQ6NUI1 221 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 ZNF774Q6NX45 483 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 SLC27A4Q6P1M0 643 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 BTNL3Q6UXE8 466 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 LRRN1Q6UXK5 716 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 ZCCHC23Q6ZST2 131 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 C3orf62Q6ZUJ4 267 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 GRINAQ7Z429 371 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 RNF130Q86XS8 419 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 KLBQ86Z14 1044 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 DDIASQ8IXT1 998 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 TMEM86BQ8N661 226 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 OR7A2PQ8NGA2 310 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 OR5AK3PQ8NH89 298 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 FBXO25Q8TCJ0 367 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 PYROXD1Q8WU10 500 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 C17orf50Q8WW18 174 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 TMEM234Q8WY98 164 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.42□□□□□ -2.022e-6■■■■■ 29
CHMP4A-208ENST00000534106 C11orf40Q8WZ69 217 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 RORBQ92753 470 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 LHX4Q969G2 390 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 TLCD1Q96CP7 247 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 SPDL1Q96EA4 605 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 FAM71F1Q96KD3 344 aaPredicted RBP2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 MS4A4EQ96PG1 132 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 TSSK3Q96PN8 268 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 OR2M2Q96R28 347 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 OR7D2Q96RA2 312 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 OR5M11Q96RB7 305 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 ARHGDIGQ99819 225 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 CPNE1Q99829 537 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 CITED2Q99967 270 aaPredicted RBP2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 NUDT16L1Q9BRJ7 211 aaKnown RBP2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 THAP7Q9BT49 309 aaPredicted RBP2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 SF3B5Q9BWJ5 86 aaKnown RBP2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 PIGUQ9H490 435 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 ZCCHC3Q9NUD5 404 aaKnown RBP2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 TMEM106BQ9NUM4 274 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 NKIRAS2Q9NYR9 191 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 NINJ2Q9NZG7 142 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 B3GAT1Q9P2W7 334 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 MGAT4CQ9UBM8 478 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 GIMAP2Q9UG22 337 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 OR5V1Q9UGF6 321 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 HAO1Q9UJM8 370 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 BAG5Q9UL15 447 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 ARL2BPQ9Y2Y0 163 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 UBE2J1Q9Y385 318 aaPredicted RBP2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 DSPPQ9NZW4 1301 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 DNAH17Q9UFH2 4485 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 IGHV1-69DA0A0B4J2H0 117 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 A0A0G2JND7 137 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 CCDC160A6NGH7 325 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 ANKRD61A6NGH8 418 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 SAC3D1A6NKF1 404 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 A8MT66 165 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 A8MXK9 166 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 ZNF99A8MXY4 864 aaPredicted RBP2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 E7ESA3 106 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 MS4A18H0YCH9 400 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 STX16-NPEPL1H3BU86 382 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 STX16O14662 325 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 ZNF208O43345 1280 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 SMIM24O75264 130 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 SEC22BO75396 215 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 FCN3O75636 299 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 DCTN3O75935 186 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 SUPT7LO94864 414 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 RAB36O95755 333 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 C6orf47O95873 294 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 CYB5R3P00387 301 aaPredicted RBP2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 OTCP00480 354 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 IGHV1-69P01742 117 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 IGHV3-13P01766 116 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 KRT6AP02538 564 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 TK1P04183 234 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 KRT6BP04259 564 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 SERPINA5P05154 406 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 GPIP06744 558 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 RPS17P08708 135 aaKnown RBP2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 GKN3PP0CG01 181 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 PPIAL4GP0DN37 164 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 OR12D1P0DN82 309 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 PRG2P13727 222 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms