RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 GUCY1A3Q02108 690 aa5.21□□□□□ -1.58
CD44-237ENST00000534082 CAV1Q03135 178 aa5.21□□□□□ -1.58
CD44-237ENST00000534082 ACSM1Q08AH1 577 aa5.21□□□□□ -1.58
CD44-237ENST00000534082 TMEM95Q3KNT9 176 aa5.21□□□□□ -1.58
CD44-237ENST00000534082 KHDC1LQ5JSQ8 128 aa5.21□□□□□ -1.58
CD44-237ENST00000534082 KANK2Q63ZY3 851 aa5.21□□□□□ -1.58
CD44-237ENST00000534082 ZYG11AQ6WRX3 759 aa5.21□□□□□ -1.58
CD44-237ENST00000534082 SLC35D2Q76EJ3 337 aa5.21□□□□□ -1.58
CD44-237ENST00000534082 LCA5Q86VQ0 697 aa5.21□□□□□ -1.58
CD44-237ENST00000534082 CREG2Q8IUH2 290 aa5.21□□□□□ -1.58
CD44-237ENST00000534082 NUDCD3Q8IVD9 361 aa5.21□□□□□ -1.58
CD44-237ENST00000534082 SBSPONQ8IVN8 264 aa5.21□□□□□ -1.58
CD44-237ENST00000534082 MRPL41Q8IXM3 137 aaKnown RBP5.21□□□□□ -1.58
CD44-237ENST00000534082 LRRC34Q8IZ02 419 aa5.21□□□□□ -1.58
CD44-237ENST00000534082 CMTM4Q8IZR5 234 aa5.21□□□□□ -1.58
CD44-237ENST00000534082 NOXO1Q8NFA2 376 aa5.21□□□□□ -1.58
CD44-237ENST00000534082 OR5AU1Q8NGC0 362 aa5.21□□□□□ -1.58
CD44-237ENST00000534082 OR11L1Q8NGX0 322 aa5.21□□□□□ -1.58
CD44-237ENST00000534082 OR6S1Q8NH40 331 aa5.21□□□□□ -1.58
CD44-237ENST00000534082 TWIST2Q8WVJ9 160 aa5.21□□□□□ -1.58
CD44-237ENST00000534082 C17orf50Q8WW18 174 aa5.21□□□□□ -1.58
CD44-237ENST00000534082 ST8SIA4Q92187 359 aa5.21□□□□□ -1.58
CD44-237ENST00000534082 MCHR2Q969V1 340 aa5.21□□□□□ -1.58
CD44-237ENST00000534082 HAVCR1Q96D42 359 aa5.21□□□□□ -1.58
CD44-237ENST00000534082 TEX37Q96LM6 180 aa5.21□□□□□ -1.58
CD44-237ENST00000534082 PPP3R2Q96LZ3 170 aa5.21□□□□□ -1.58
CD44-237ENST00000534082 ZNF347Q96SE7 839 aa5.21□□□□□ -1.58
CD44-237ENST00000534082 SLC35A5Q9BS91 424 aa5.21□□□□□ -1.58
CD44-237ENST00000534082 MCRIP2Q9BUT9 160 aaKnown RBP5.21□□□□□ -1.58
CD44-237ENST00000534082 CDCA4Q9BXL8 241 aa5.21□□□□□ -1.58
CD44-237ENST00000534082 OR2H1Q9GZK4 316 aa5.21□□□□□ -1.58
CD44-237ENST00000534082 PCDHAC1Q9H158 963 aa5.21□□□□□ -1.58
CD44-237ENST00000534082 WNT5BQ9H1J7 359 aa5.21□□□□□ -1.58
CD44-237ENST00000534082 MEGF9Q9H1U4 602 aa5.21□□□□□ -1.58
CD44-237ENST00000534082 MEAF6Q9HAF1 191 aa5.21□□□□□ -1.58
CD44-237ENST00000534082 SIAEQ9HAT2 523 aa5.21□□□□□ -1.58
CD44-237ENST00000534082 C19orf73Q9NVV2 129 aa5.21□□□□□ -1.58
CD44-237ENST00000534082 NINJ2Q9NZG7 142 aa5.21□□□□□ -1.58
CD44-237ENST00000534082 CHST2Q9Y4C5 530 aa5.21□□□□□ -1.58
CD44-237ENST00000534082 DNAJC15Q9Y5T4 150 aa5.21□□□□□ -1.58
CD44-237ENST00000534082 TSSC4Q9Y5U2 329 aaPredicted RBP5.21□□□□□ -1.58
CD44-237ENST00000534082 A0A1B0GW55 424 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 A0A1B0GWA3 101 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 TCRBV4S1A1TA0A5B7 111 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 TMEM233B4DJY2 109 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 G3V2L1 256 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 LGALS8O00214 317 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 DVL1O14640 695 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 HDAC3O15379 428 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 SYNGR1O43759 233 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 OR6A2O95222 327 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 BPNT1O95861 308 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 IGF2P01344 180 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 IGHG1P01857 330 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 SNRPAP09012 282 aaKnown RBP5.2□□□□□ -1.58
CD44-237ENST00000534082 DUX4L2P0CJ85 424 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 DUX4L3P0CJ86 424 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 DUX4L5P0CJ88 424 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 DUX4L6P0CJ89 424 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 DUX4L7P0CJ90 424 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 RAC2P15153 192 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 PAX6P26367 422 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 GDNFP39905 211 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 VDAC2P45880 294 aaPredicted RBP5.2□□□□□ -1.58
CD44-237ENST00000534082 HTR5AP47898 357 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 UBE2E1P51965 193 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 MRPS34P82930 218 aaKnown RBP5.2□□□□□ -1.58
CD44-237ENST00000534082 AANATQ16613 207 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 ALG10BQ5I7T1 473 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 CLEC12AQ5QGZ9 265 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 CEP85LQ5SZL2 805 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 IL23RQ5VWK5 629 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 SFRP4Q6FHJ7 346 aaPredicted RBP5.2□□□□□ -1.58
CD44-237ENST00000534082 DUX4L9Q6RFH8 374 aaPredicted RBP5.2□□□□□ -1.58
CD44-237ENST00000534082 ETV3LQ6ZN32 361 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 LHFPL2Q6ZUX7 228 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 C10orf53Q8N6V4 93 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 Q8N7P7 452 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 BOLLQ8N9W6 283 aaKnown RBP5.2□□□□□ -1.58
CD44-237ENST00000534082 FNDC5Q8NAU1 212 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 OR13G1Q8NGZ3 307 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 OR5J2Q8NH18 312 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 Q8TCH9 128 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 GATAD1Q8WUU5 269 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 MYDGFQ969H8 173 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 NABP1Q96AH0 204 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 EPYCQ99645 322 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 NAPGQ99747 312 aaPredicted RBP5.2□□□□□ -1.58
CD44-237ENST00000534082 SPATA9Q9BWV2 254 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 PRSS22Q9GZN4 317 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 MYLK2Q9H1R3 596 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 DUX4Q9UBX2 424 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 ZNF180Q9UJW8 692 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 EMCNQ9ULC0 261 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 NDRG4Q9ULP0 352 aaKnown RBP5.2□□□□□ -1.58
CD44-237ENST00000534082 UGT2A1Q9Y4X1 527 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 PKHD1P08F94 4074 aa5.2□□□□□ -1.58
CD44-237ENST00000534082 DNAH11Q96DT5 4516 aa5.19□□□□□ -1.58
CD44-237ENST00000534082 TRBV23-1A0A0A0MS06 115 aa5.19□□□□□ -1.58
CD44-237ENST00000534082 WDR91A4D1P6 747 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms