RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 GPR32P1Q8NGA4 272 aa10.08□□□□□ -0.8
SVIP-205ENST00000533774 HIST1H2ACQ93077 130 aa10.08□□□□□ -0.8
SVIP-205ENST00000533774 PTP4A1Q93096 173 aa10.08□□□□□ -0.8
SVIP-205ENST00000533774 C16orf45Q96MC5 204 aaPredicted RBP10.08□□□□□ -0.8
SVIP-205ENST00000533774 PRSS27Q9BQR3 290 aa10.08□□□□□ -0.8
SVIP-205ENST00000533774 EMC7Q9NPA0 242 aa10.08□□□□□ -0.8
SVIP-205ENST00000533774 INIPQ9NRY2 104 aa10.08□□□□□ -0.8
SVIP-205ENST00000533774 SLAMF8Q9P0V8 285 aa10.08□□□□□ -0.8
SVIP-205ENST00000533774 SLC7A7Q9UM01 511 aa10.08□□□□□ -0.8
SVIP-205ENST00000533774 DNAH1Q9P2D7 4330 aa10.08□□□□□ -0.8
SVIP-205ENST00000533774 A0A1W2PRD5 423 aa10.07□□□□□ -0.8
SVIP-205ENST00000533774 A0A1W2PRF3 423 aa10.07□□□□□ -0.8
SVIP-205ENST00000533774 A0A1W2PRM7 423 aa10.07□□□□□ -0.8
SVIP-205ENST00000533774 RNASEK-C17orf49H0YIS7 233 aa10.07□□□□□ -0.8
SVIP-205ENST00000533774 OR10H3O60404 316 aa10.07□□□□□ -0.8
SVIP-205ENST00000533774 FAM20BO75063 409 aa10.07□□□□□ -0.8
SVIP-205ENST00000533774 OPN1SWP03999 348 aa10.07□□□□□ -0.8
SVIP-205ENST00000533774 LIPFP07098 398 aa10.07□□□□□ -0.8
SVIP-205ENST00000533774 TSPAN19P0C672 248 aa10.07□□□□□ -0.8
SVIP-205ENST00000533774 RAC2P15153 192 aa10.07□□□□□ -0.8
SVIP-205ENST00000533774 NPY4RP50391 375 aa10.07□□□□□ -0.8
SVIP-205ENST00000533774 KRTAP10-11P60412 298 aa10.07□□□□□ -0.8
SVIP-205ENST00000533774 MAB21L1Q13394 359 aa10.07□□□□□ -0.8
SVIP-205ENST00000533774 DUSP7Q16829 419 aa10.07□□□□□ -0.8
SVIP-205ENST00000533774 GCNT6Q5T4J0 391 aa10.07□□□□□ -0.8
SVIP-205ENST00000533774 OTPQ5XKR4 325 aa10.07□□□□□ -0.8
SVIP-205ENST00000533774 CD276Q5ZPR3 534 aa10.07□□□□□ -0.8
SVIP-205ENST00000533774 SFRP4Q6FHJ7 346 aaPredicted RBP10.07□□□□□ -0.8
SVIP-205ENST00000533774 ARL9Q6T311 187 aa10.07□□□□□ -0.8
SVIP-205ENST00000533774 PNKDQ8N490 385 aa10.07□□□□□ -0.8
SVIP-205ENST00000533774 OR13G1Q8NGZ3 307 aa10.07□□□□□ -0.8
SVIP-205ENST00000533774 PFN4Q8NHR9 129 aa10.07□□□□□ -0.8
SVIP-205ENST00000533774 ADAMTS16Q8TE57 1224 aa10.07□□□□□ -0.8
SVIP-205ENST00000533774 MAGEB18Q96M61 343 aa10.07□□□□□ -0.8
SVIP-205ENST00000533774 SPATA5L1Q9BVQ7 753 aa10.07□□□□□ -0.8
SVIP-205ENST00000533774 MMADHCQ9H3L0 296 aaPredicted RBP10.07□□□□□ -0.8
SVIP-205ENST00000533774 IKZF5Q9H5V7 419 aa10.07□□□□□ -0.8
SVIP-205ENST00000533774 PTTG3PQ9NZH4 202 aa10.07□□□□□ -0.8
SVIP-205ENST00000533774 LGALS13Q9UHV8 139 aa10.07□□□□□ -0.8
SVIP-205ENST00000533774 NDRG4Q9ULP0 352 aaKnown RBP10.07□□□□□ -0.8
SVIP-205ENST00000533774 ANGPT4Q9Y264 503 aa10.07□□□□□ -0.8
SVIP-205ENST00000533774 FAM96BQ9Y3D0 163 aa10.07□□□□□ -0.8
SVIP-205ENST00000533774 LYSTQ99698 3801 aa10.07□□□□□ -0.8
SVIP-205ENST00000533774 A0A1B0GWJ7 208 aa10.06□□□□□ -0.8
SVIP-205ENST00000533774 ANKRD61A6NGH8 418 aa10.06□□□□□ -0.8
SVIP-205ENST00000533774 LRRC30A6NM36 301 aa10.06□□□□□ -0.8
SVIP-205ENST00000533774 DOK2O60496 412 aa10.06□□□□□ -0.8
SVIP-205ENST00000533774 DBHP09172 617 aa10.06□□□□□ -0.8
SVIP-205ENST00000533774 FBP1P09467 338 aa10.06□□□□□ -0.8
SVIP-205ENST00000533774 COX5BP10606 129 aa10.06□□□□□ -0.8
SVIP-205ENST00000533774 CD28P10747 220 aa10.06□□□□□ -0.8
SVIP-205ENST00000533774 FUT1P19526 365 aa10.06□□□□□ -0.8
SVIP-205ENST00000533774 BGNP21810 368 aa10.06□□□□□ -0.8
SVIP-205ENST00000533774 TUBG1P23258 451 aa10.06□□□□□ -0.8
SVIP-205ENST00000533774 KIR2DS4P43632 304 aa10.06□□□□□ -0.8
SVIP-205ENST00000533774 GATA4P43694 442 aa10.06□□□□□ -0.8
SVIP-205ENST00000533774 HTR5AP47898 357 aa10.06□□□□□ -0.8
SVIP-205ENST00000533774 DAP3P51398 398 aaKnown RBP10.06□□□□□ -0.8
SVIP-205ENST00000533774 RAD23AP54725 363 aa10.06□□□□□ -0.8
SVIP-205ENST00000533774 PCBD1P61457 104 aa10.06□□□□□ -0.8
SVIP-205ENST00000533774 SCARB2Q14108 478 aa10.06□□□□□ -0.8
SVIP-205ENST00000533774 MPPED2Q15777 294 aa10.06□□□□□ -0.8
SVIP-205ENST00000533774 DEFB121Q5J5C9 76 aa10.06□□□□□ -0.8
SVIP-205ENST00000533774 ZBTB37Q5TC79 503 aa10.06□□□□□ -0.8
SVIP-205ENST00000533774 PRAMEF6Q5VXH4 476 aa10.06□□□□□ -0.8
SVIP-205ENST00000533774 FBXW12Q6X9E4 464 aa10.06□□□□□ -0.8
SVIP-205ENST00000533774 MSANTD1Q6ZTZ1 278 aa10.06□□□□□ -0.8
SVIP-205ENST00000533774 BTN2A1Q7KYR7 527 aa10.06□□□□□ -0.8
SVIP-205ENST00000533774 CALHM3Q86XJ0 350 aa10.06□□□□□ -0.8
SVIP-205ENST00000533774 KRT73Q86Y46 540 aa10.06□□□□□ -0.8
SVIP-205ENST00000533774 ARMC8Q8IUR7 673 aa10.06□□□□□ -0.8
SVIP-205ENST00000533774 SLC30A8Q8IWU4 369 aa10.06□□□□□ -0.8
SVIP-205ENST00000533774 C1orf87Q8N0U7 546 aa10.06□□□□□ -0.8
SVIP-205ENST00000533774 PNLDC1Q8NA58 520 aaKnown RBP10.06□□□□□ -0.8
SVIP-205ENST00000533774 BHLHE23Q8NDY6 225 aa10.06□□□□□ -0.8
SVIP-205ENST00000533774 Q8TCH9 128 aa10.06□□□□□ -0.8
SVIP-205ENST00000533774 RMND5AQ9H871 391 aa10.06□□□□□ -0.8
SVIP-205ENST00000533774 TUBG2Q9NRH3 451 aa10.06□□□□□ -0.8
SVIP-205ENST00000533774 C20orf141Q9NUB4 165 aa10.06□□□□□ -0.8
SVIP-205ENST00000533774 UFSP2Q9NUQ7 469 aa10.06□□□□□ -0.8
SVIP-205ENST00000533774 ERVK-18Q9QC07 812 aa10.06□□□□□ -0.8
SVIP-205ENST00000533774 A0A1W2PPL8 197 aa10.05□□□□□ -0.8
SVIP-205ENST00000533774 ADAM20O43506 726 aa10.05□□□□□ -0.8
SVIP-205ENST00000533774 SHOX2O60902 331 aaPredicted RBP10.05□□□□□ -0.8
SVIP-205ENST00000533774 OR7A10O76100 309 aa10.05□□□□□ -0.8
SVIP-205ENST00000533774 VSIG10L2P0DP72 767 aa10.05□□□□□ -0.8
SVIP-205ENST00000533774 POLR2JP52435 117 aaKnown RBP10.05□□□□□ -0.8
SVIP-205ENST00000533774 ELF3P78545 371 aaPredicted RBP10.05□□□□□ -0.8
SVIP-205ENST00000533774 KLRD1Q13241 179 aa10.05□□□□□ -0.8
SVIP-205ENST00000533774 TOP3AQ13472 1001 aaPredicted RBP10.05□□□□□ -0.8
SVIP-205ENST00000533774 CRIP3Q6Q6R5 217 aa10.05□□□□□ -0.8
SVIP-205ENST00000533774 IGFN1Q86VF2 1251 aa10.05□□□□□ -0.8
SVIP-205ENST00000533774 C17orf50Q8WW18 174 aa10.05□□□□□ -0.8
SVIP-205ENST00000533774 R3HDM4Q96D70 268 aa10.05□□□□□ -0.8
SVIP-205ENST00000533774 TXNIPQ9H3M7 391 aa10.05□□□□□ -0.8
SVIP-205ENST00000533774 POLE4Q9NR33 117 aa10.05□□□□□ -0.8
SVIP-205ENST00000533774 DNAJB11Q9UBS4 358 aa10.05□□□□□ -0.8
SVIP-205ENST00000533774 A0A1B0GW55 424 aa10.04□□□□□ -0.8
SVIP-205ENST00000533774 TRAPPC13A5PLN9 417 aa10.04□□□□□ -0.8
SVIP-205ENST00000533774 BTBD17A6NE02 478 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms