RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 SIAH2O43255 324 aa10.33□□□□□ -0.76
COMMD9-208ENST00000533643 HTR1AP08908 422 aa10.33□□□□□ -0.76
COMMD9-208ENST00000533643 DBHP09172 617 aa10.33□□□□□ -0.76
COMMD9-208ENST00000533643 H2BFMP0C1H6 154 aa10.33□□□□□ -0.76
COMMD9-208ENST00000533643 CCL2P13500 99 aa10.33□□□□□ -0.76
COMMD9-208ENST00000533643 CD40P25942 277 aa10.33□□□□□ -0.76
COMMD9-208ENST00000533643 APLNRP35414 380 aa10.33□□□□□ -0.76
COMMD9-208ENST00000533643 GDI2P50395 445 aaKnown RBP10.33□□□□□ -0.76
COMMD9-208ENST00000533643 CHN2P52757 468 aa10.33□□□□□ -0.76
COMMD9-208ENST00000533643 EGR3Q06889 387 aa10.33□□□□□ -0.76
COMMD9-208ENST00000533643 GALEQ14376 348 aa10.33□□□□□ -0.76
COMMD9-208ENST00000533643 TAF13Q15543 124 aa10.33□□□□□ -0.76
COMMD9-208ENST00000533643 LRRN1Q6UXK5 716 aa10.33□□□□□ -0.76
COMMD9-208ENST00000533643 RHOUQ7L0Q8 258 aa10.33□□□□□ -0.76
COMMD9-208ENST00000533643 ZNF679Q8IYX0 411 aa10.33□□□□□ -0.76
COMMD9-208ENST00000533643 PAQR4Q8N4S7 273 aaPredicted RBP10.33□□□□□ -0.76
COMMD9-208ENST00000533643 PSMG3-AS1Q96PY0 264 aa10.33□□□□□ -0.76
COMMD9-208ENST00000533643 OR8B4Q96RC9 309 aa10.33□□□□□ -0.76
COMMD9-208ENST00000533643 SIGLEC11Q96RL6 698 aa10.33□□□□□ -0.76
COMMD9-208ENST00000533643 ELOVL3Q9HB03 270 aa10.33□□□□□ -0.76
COMMD9-208ENST00000533643 CLEC2DQ9UHP7 191 aa10.33□□□□□ -0.76
COMMD9-208ENST00000533643 MRM2Q9UI43 246 aaKnown RBP10.33□□□□□ -0.76
COMMD9-208ENST00000533643 BLOC1S6Q9UL45 172 aa10.33□□□□□ -0.76
COMMD9-208ENST00000533643 EXOSC1Q9Y3B2 195 aaKnown RBP10.33□□□□□ -0.76
COMMD9-208ENST00000533643 IGHV2OR16-5A0A0B4J2B6 119 aa10.32□□□□□ -0.76
COMMD9-208ENST00000533643 C5orf49A4QMS7 147 aa10.32□□□□□ -0.76
COMMD9-208ENST00000533643 METTL15A6NJ78 407 aa10.32□□□□□ -0.76
COMMD9-208ENST00000533643 DEFB108AA8MXU0 73 aa10.32□□□□□ -0.76
COMMD9-208ENST00000533643 RGS10O43665 173 aa10.32□□□□□ -0.76
COMMD9-208ENST00000533643 ABHD16AO95870 558 aa10.32□□□□□ -0.76
COMMD9-208ENST00000533643 MT-ND2P03891 347 aa10.32□□□□□ -0.76
COMMD9-208ENST00000533643 ZNF35P13682 527 aa10.32□□□□□ -0.76
COMMD9-208ENST00000533643 EEF1B2P24534 225 aaKnown RBP10.32□□□□□ -0.76
COMMD9-208ENST00000533643 PTAFRP25105 342 aa10.32□□□□□ -0.76
COMMD9-208ENST00000533643 LOXP28300 417 aaPredicted RBP10.32□□□□□ -0.76
COMMD9-208ENST00000533643 CALCRP30988 508 aa10.32□□□□□ -0.76
COMMD9-208ENST00000533643 OTX1P32242 354 aaPredicted RBP10.32□□□□□ -0.76
COMMD9-208ENST00000533643 OR12D2P58182 307 aa10.32□□□□□ -0.76
COMMD9-208ENST00000533643 GABARAPL2P60520 117 aa10.32□□□□□ -0.76
COMMD9-208ENST00000533643 GRB2P62993 217 aaKnown RBP10.32□□□□□ -0.76
COMMD9-208ENST00000533643 GALK2Q01415 458 aa10.32□□□□□ -0.76
COMMD9-208ENST00000533643 NAAAQ02083 359 aa10.32□□□□□ -0.76
COMMD9-208ENST00000533643 HGFACQ04756 655 aa10.32□□□□□ -0.76
COMMD9-208ENST00000533643 BSPH1Q075Z2 132 aa10.32□□□□□ -0.76
COMMD9-208ENST00000533643 CDONQ4KMG0 1287 aa10.32□□□□□ -0.76
COMMD9-208ENST00000533643 NCMAPQ5T1S8 102 aa10.32□□□□□ -0.76
COMMD9-208ENST00000533643 RNLSQ5VYX0 342 aa10.32□□□□□ -0.76
COMMD9-208ENST00000533643 SP5Q6BEB4 398 aaPredicted RBP10.32□□□□□ -0.76
COMMD9-208ENST00000533643 DEGS2Q6QHC5 323 aa10.32□□□□□ -0.76
COMMD9-208ENST00000533643 PLEKHG7Q6ZR37 379 aa10.32□□□□□ -0.76
COMMD9-208ENST00000533643 KRT77Q7Z794 578 aa10.32□□□□□ -0.76
COMMD9-208ENST00000533643 IL17RDQ8NFM7 739 aa10.32□□□□□ -0.76
COMMD9-208ENST00000533643 OR1J2Q8NGS2 313 aa10.32□□□□□ -0.76
COMMD9-208ENST00000533643 SNX33Q8WV41 574 aa10.32□□□□□ -0.76
COMMD9-208ENST00000533643 PLPPR2Q96GM1 343 aa10.32□□□□□ -0.76
COMMD9-208ENST00000533643 KCNJ15Q99712 375 aa10.32□□□□□ -0.76
COMMD9-208ENST00000533643 ALG8Q9BVK2 526 aa10.32□□□□□ -0.76
COMMD9-208ENST00000533643 IKZF2Q9UKS7 526 aa10.32□□□□□ -0.76
COMMD9-208ENST00000533643 LRP12Q9Y561 859 aa10.32□□□□□ -0.76
COMMD9-208ENST00000533643 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.31□□□□□ -0.76
COMMD9-208ENST00000533643 TRIM64A6NGJ6 449 aa10.31□□□□□ -0.76
COMMD9-208ENST00000533643 F5H5K5 113 aa10.31□□□□□ -0.76
COMMD9-208ENST00000533643 J3QLW9 94 aa10.31□□□□□ -0.76
COMMD9-208ENST00000533643 ZNF254O75437 659 aa10.31□□□□□ -0.76
COMMD9-208ENST00000533643 SULT1C4O75897 302 aa10.31□□□□□ -0.76
COMMD9-208ENST00000533643 ACSM4P0C7M7 580 aa10.31□□□□□ -0.76
COMMD9-208ENST00000533643 ZNF19P17023 458 aa10.31□□□□□ -0.76
COMMD9-208ENST00000533643 MYL12AP19105 171 aa10.31□□□□□ -0.76
COMMD9-208ENST00000533643 WNT5AP41221 380 aa10.31□□□□□ -0.76
COMMD9-208ENST00000533643 PRKXP51817 358 aa10.31□□□□□ -0.76
COMMD9-208ENST00000533643 CDH15P55291 814 aa10.31□□□□□ -0.76
COMMD9-208ENST00000533643 TPTEP56180 551 aa10.31□□□□□ -0.76
COMMD9-208ENST00000533643 SPOCK1Q08629 439 aa10.31□□□□□ -0.76
COMMD9-208ENST00000533643 IRF3Q14653 427 aa10.31□□□□□ -0.76
COMMD9-208ENST00000533643 DAZAP2Q15038 168 aaPredicted RBP10.31□□□□□ -0.76
COMMD9-208ENST00000533643 TBC1D28Q2M2D7 210 aa10.31□□□□□ -0.76
COMMD9-208ENST00000533643 KCTD21Q4G0X4 260 aa10.31□□□□□ -0.76
COMMD9-208ENST00000533643 TP53I3Q53FA7 332 aa10.31□□□□□ -0.76
COMMD9-208ENST00000533643 BEX5Q5H9J7 111 aa10.31□□□□□ -0.76
COMMD9-208ENST00000533643 TMEM108Q6UXF1 575 aa10.31□□□□□ -0.76
COMMD9-208ENST00000533643 PRSS48Q7RTY5 328 aa10.31□□□□□ -0.76
COMMD9-208ENST00000533643 KCTD20Q7Z5Y7 419 aa10.31□□□□□ -0.76
COMMD9-208ENST00000533643 NAA40Q86UY6 237 aa10.31□□□□□ -0.76
COMMD9-208ENST00000533643 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.31□□□□□ -0.76
COMMD9-208ENST00000533643 YIPF7Q8N8F6 280 aa10.31□□□□□ -0.76
COMMD9-208ENST00000533643 SPTSSAQ969W0 71 aa10.31□□□□□ -0.76
COMMD9-208ENST00000533643 RNF166Q96A37 237 aaPredicted RBP10.31□□□□□ -0.76
COMMD9-208ENST00000533643 MRPL48Q96GC5 212 aaKnown RBP10.31□□□□□ -0.76
COMMD9-208ENST00000533643 NR1H4Q96RI1 486 aaPredicted RBP10.31□□□□□ -0.76
COMMD9-208ENST00000533643 DCLRE1CQ96SD1 692 aaKnown RBP10.31□□□□□ -0.76
COMMD9-208ENST00000533643 CDCA4Q9BXL8 241 aa10.31□□□□□ -0.76
COMMD9-208ENST00000533643 MROQ9BYG7 248 aa10.31□□□□□ -0.76
COMMD9-208ENST00000533643 ESRP2Q9H6T0 727 aaKnown RBP10.31□□□□□ -0.76
COMMD9-208ENST00000533643 ISG20L2Q9H9L3 353 aaKnown RBP10.31□□□□□ -0.76
COMMD9-208ENST00000533643 CDH20Q9HBT6 801 aa10.31□□□□□ -0.76
COMMD9-208ENST00000533643 CHCHD3Q9NX63 227 aaKnown RBP10.31□□□□□ -0.76
COMMD9-208ENST00000533643 GNG8Q9UK08 70 aa10.31□□□□□ -0.76
COMMD9-208ENST00000533643 CAB39Q9Y376 341 aaPredicted RBP10.31□□□□□ -0.76
COMMD9-208ENST00000533643 GRIP1Q9Y3R0 1128 aa10.31□□□□□ -0.76
COMMD9-208ENST00000533643 TMEM129A0AVI4 362 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms