RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 RFX4Q33E94 735 aa10.49□□□□□ -0.73
CAPRIN1-213ENST00000533562 CCDC92Q53HC0 331 aaPredicted RBP10.49□□□□□ -0.73
CAPRIN1-213ENST00000533562 C12orf54Q6X4T0 127 aa10.49□□□□□ -0.73
CAPRIN1-213ENST00000533562 PTCHD4Q6ZW05 846 aa10.49□□□□□ -0.73
CAPRIN1-213ENST00000533562 C1QL2Q7Z5L3 287 aa10.49□□□□□ -0.73
CAPRIN1-213ENST00000533562 CPLX4Q7Z7G2 160 aa10.49□□□□□ -0.73
CAPRIN1-213ENST00000533562 SPICQ8N5J4 248 aa10.49□□□□□ -0.73
CAPRIN1-213ENST00000533562 RNF148Q8N7C7 305 aa10.49□□□□□ -0.73
CAPRIN1-213ENST00000533562 SLC7A6Q92536 515 aa10.49□□□□□ -0.73
CAPRIN1-213ENST00000533562 ERMAPQ96PL5 475 aaPredicted RBP10.49□□□□□ -0.73
CAPRIN1-213ENST00000533562 NSRP1Q9H0G5 558 aaKnown RBP10.49□□□□□ -0.73
CAPRIN1-213ENST00000533562 POFUT1Q9H488 388 aa10.49□□□□□ -0.73
CAPRIN1-213ENST00000533562 MAGEL2Q9UJ55 1249 aa10.49□□□□□ -0.73
CAPRIN1-213ENST00000533562 ARHGAP32A7KAX9 2087 aa10.49□□□□□ -0.73
CAPRIN1-213ENST00000533562 DYSFO75923 2080 aa10.49□□□□□ -0.73
CAPRIN1-213ENST00000533562 TRIM77I1YAP6 450 aa10.48□□□□□ -0.73
CAPRIN1-213ENST00000533562 IFNL4K9M1U5 179 aa10.48□□□□□ -0.73
CAPRIN1-213ENST00000533562 SNX3O60493 162 aa10.48□□□□□ -0.73
CAPRIN1-213ENST00000533562 RENP00797 406 aa10.48□□□□□ -0.73
CAPRIN1-213ENST00000533562 IGHV2-70P01814 119 aa10.48□□□□□ -0.73
CAPRIN1-213ENST00000533562 HSD17B1P14061 328 aa10.48□□□□□ -0.73
CAPRIN1-213ENST00000533562 FPR2P25090 351 aa10.48□□□□□ -0.73
CAPRIN1-213ENST00000533562 NOS3P29474 1203 aa10.48□□□□□ -0.73
CAPRIN1-213ENST00000533562 SLC6A6P31641 620 aa10.48□□□□□ -0.73
CAPRIN1-213ENST00000533562 FXYD6P3P58550 94 aa10.48□□□□□ -0.73
CAPRIN1-213ENST00000533562 TMEM155Q4W5P6 130 aa10.48□□□□□ -0.73
CAPRIN1-213ENST00000533562 SPRNQ5BIV9 151 aa10.48□□□□□ -0.73
CAPRIN1-213ENST00000533562 SAMD4BQ5PRF9 694 aaKnown RBP10.48□□□□□ -0.73
CAPRIN1-213ENST00000533562 FBXW12Q6X9E4 464 aa10.48□□□□□ -0.73
CAPRIN1-213ENST00000533562 Q6ZR03 302 aa10.48□□□□□ -0.73
CAPRIN1-213ENST00000533562 JAZF1Q86VZ6 243 aa10.48□□□□□ -0.73
CAPRIN1-213ENST00000533562 LRRC28Q86X40 367 aaPredicted RBP10.48□□□□□ -0.73
CAPRIN1-213ENST00000533562 ZNF283Q8N7M2 679 aa10.48□□□□□ -0.73
CAPRIN1-213ENST00000533562 FAM86B1Q8N7N1 296 aa10.48□□□□□ -0.73
CAPRIN1-213ENST00000533562 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.48□□□□□ -0.73
CAPRIN1-213ENST00000533562 ATG16L2Q8NAA4 619 aa10.48□□□□□ -0.73
CAPRIN1-213ENST00000533562 SEMA6DQ8NFY4 1073 aa10.48□□□□□ -0.73
CAPRIN1-213ENST00000533562 OR13G1Q8NGZ3 307 aa10.48□□□□□ -0.73
CAPRIN1-213ENST00000533562 FANK1Q8TC84 345 aa10.48□□□□□ -0.73
CAPRIN1-213ENST00000533562 APOBEC3DQ96AK3 386 aaPredicted RBP10.48□□□□□ -0.73
CAPRIN1-213ENST00000533562 ZNF582Q96NG8 517 aaPredicted RBP10.48□□□□□ -0.73
CAPRIN1-213ENST00000533562 GPA33Q99795 319 aa10.48□□□□□ -0.73
CAPRIN1-213ENST00000533562 FUZQ9BT04 418 aa10.48□□□□□ -0.73
CAPRIN1-213ENST00000533562 CDADC1Q9BWV3 514 aa10.48□□□□□ -0.73
CAPRIN1-213ENST00000533562 SUCNR1Q9BXA5 334 aa10.48□□□□□ -0.73
CAPRIN1-213ENST00000533562 HDHD2Q9H0R4 259 aa10.48□□□□□ -0.73
CAPRIN1-213ENST00000533562 SRA1Q9HD15 236 aaKnown RBP10.48□□□□□ -0.73
CAPRIN1-213ENST00000533562 TMCC3Q9ULS5 477 aa10.48□□□□□ -0.73
CAPRIN1-213ENST00000533562 B9D1Q9UPM9 204 aa10.48□□□□□ -0.73
CAPRIN1-213ENST00000533562 ARPC3O15145 178 aa10.47□□□□□ -0.73
CAPRIN1-213ENST00000533562 IDH3BO43837 385 aa10.47□□□□□ -0.73
CAPRIN1-213ENST00000533562 OR10H3O60404 316 aa10.47□□□□□ -0.73
CAPRIN1-213ENST00000533562 RGS9O75916 674 aaPredicted RBP10.47□□□□□ -0.73
CAPRIN1-213ENST00000533562 PPP1R3DO95685 299 aa10.47□□□□□ -0.73
CAPRIN1-213ENST00000533562 DBHP09172 617 aa10.47□□□□□ -0.73
CAPRIN1-213ENST00000533562 ADRA2CP18825 462 aa10.47□□□□□ -0.73
CAPRIN1-213ENST00000533562 FPR3P25089 353 aa10.47□□□□□ -0.73
CAPRIN1-213ENST00000533562 HILS1P60008 231 aa10.47□□□□□ -0.73
CAPRIN1-213ENST00000533562 BTG1P62324 171 aa10.47□□□□□ -0.73
CAPRIN1-213ENST00000533562 HIST1H3AP68431 136 aa10.47□□□□□ -0.73
CAPRIN1-213ENST00000533562 SPIBQ01892 262 aa10.47□□□□□ -0.73
CAPRIN1-213ENST00000533562 HLXQ14774 488 aaPredicted RBP10.47□□□□□ -0.73
CAPRIN1-213ENST00000533562 SLC36A3Q495N2 470 aa10.47□□□□□ -0.73
CAPRIN1-213ENST00000533562 HIST2H3PS2Q5TEC6 136 aa10.47□□□□□ -0.73
CAPRIN1-213ENST00000533562 OTPQ5XKR4 325 aa10.47□□□□□ -0.73
CAPRIN1-213ENST00000533562 LEG1Q6P5S2 330 aa10.47□□□□□ -0.73
CAPRIN1-213ENST00000533562 HIST2H3AQ71DI3 136 aa10.47□□□□□ -0.73
CAPRIN1-213ENST00000533562 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.47□□□□□ -0.73
CAPRIN1-213ENST00000533562 OR6V1Q8N148 313 aa10.47□□□□□ -0.73
CAPRIN1-213ENST00000533562 BPIFB2Q8N4F0 458 aa10.47□□□□□ -0.73
CAPRIN1-213ENST00000533562 OR8G5Q8NG78 346 aa10.47□□□□□ -0.73
CAPRIN1-213ENST00000533562 FAM216AQ8WUB2 273 aa10.47□□□□□ -0.73
CAPRIN1-213ENST00000533562 ITLN1Q8WWA0 313 aa10.47□□□□□ -0.73
CAPRIN1-213ENST00000533562 NSMCE2Q96MF7 247 aa10.47□□□□□ -0.73
CAPRIN1-213ENST00000533562 TSSK2Q96PF2 358 aa10.47□□□□□ -0.73
CAPRIN1-213ENST00000533562 OR2V2Q96R30 315 aa10.47□□□□□ -0.73
CAPRIN1-213ENST00000533562 CDRT15Q96T59 188 aa10.47□□□□□ -0.73
CAPRIN1-213ENST00000533562 NMNAT3Q96T66 252 aa10.47□□□□□ -0.73
CAPRIN1-213ENST00000533562 COQ7Q99807 217 aa10.47□□□□□ -0.73
CAPRIN1-213ENST00000533562 IFT27Q9BW83 186 aa10.47□□□□□ -0.73
CAPRIN1-213ENST00000533562 OR52D1Q9H346 318 aa10.47□□□□□ -0.73
CAPRIN1-213ENST00000533562 LHFPL6Q9Y693 200 aa10.47□□□□□ -0.73
CAPRIN1-213ENST00000533562 V9GYQ6 96 aa10.47□□□□□ -0.73
CAPRIN1-213ENST00000533562 IGLV1-36A0A0B4J1U3 117 aa10.46□□□□□ -0.73
CAPRIN1-213ENST00000533562 DCTN6O00399 190 aa10.46□□□□□ -0.73
CAPRIN1-213ENST00000533562 KRT36O76013 467 aa10.46□□□□□ -0.73
CAPRIN1-213ENST00000533562 HLA-DQA2P01906 255 aa10.46□□□□□ -0.73
CAPRIN1-213ENST00000533562 FABP3P05413 133 aa10.46□□□□□ -0.73
CAPRIN1-213ENST00000533562 SELEP16581 610 aa10.46□□□□□ -0.73
CAPRIN1-213ENST00000533562 CPT2P23786 658 aa10.46□□□□□ -0.73
CAPRIN1-213ENST00000533562 ZFP36P26651 326 aaKnown RBP10.46□□□□□ -0.73
CAPRIN1-213ENST00000533562 MDH2P40926 338 aaKnown RBP10.46□□□□□ -0.73
CAPRIN1-213ENST00000533562 SLC6A9P48067 706 aa10.46□□□□□ -0.73
CAPRIN1-213ENST00000533562 SRP9P49458 86 aaKnown RBP10.46□□□□□ -0.73
CAPRIN1-213ENST00000533562 ACTG1P63261 375 aa10.46□□□□□ -0.73
CAPRIN1-213ENST00000533562 COX10Q12887 443 aa10.46□□□□□ -0.73
CAPRIN1-213ENST00000533562 ECH1Q13011 328 aa10.46□□□□□ -0.73
CAPRIN1-213ENST00000533562 MEP1BQ16820 701 aa10.46□□□□□ -0.73
CAPRIN1-213ENST00000533562 SPATS1Q496A3 300 aa10.46□□□□□ -0.73
CAPRIN1-213ENST00000533562 OR2T2Q6IF00 324 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms