RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 BLVRAP53004 296 aa17.48■□□□□ 0.39
CCS-208ENST00000533244 CRISP1P54107 249 aa17.48■□□□□ 0.39
CCS-208ENST00000533244 NKPD1Q17RQ9 610 aa17.48■□□□□ 0.39
CCS-208ENST00000533244 KDM4DQ6B0I6 523 aa17.48■□□□□ 0.39
CCS-208ENST00000533244 ZNF511Q8NB15 262 aa17.48■□□□□ 0.39
CCS-208ENST00000533244 OR10S1Q8NGN2 331 aa17.48■□□□□ 0.39
CCS-208ENST00000533244 OR2AJ1Q8NGZ0 328 aa17.48■□□□□ 0.39
CCS-208ENST00000533244 PYDC1Q8WXC3 89 aa17.48■□□□□ 0.39
CCS-208ENST00000533244 CENPNQ96H22 339 aaPredicted RBP17.48■□□□□ 0.39
CCS-208ENST00000533244 POFUT1Q9H488 388 aa17.48■□□□□ 0.39
CCS-208ENST00000533244 MED20Q9H944 212 aa17.48■□□□□ 0.39
CCS-208ENST00000533244 WDR76Q9H967 626 aa17.48■□□□□ 0.39
CCS-208ENST00000533244 GPR160Q9UJ42 338 aa17.48■□□□□ 0.39
CCS-208ENST00000533244 GRIP1Q9Y3R0 1128 aa17.48■□□□□ 0.39
CCS-208ENST00000533244 CSPG4Q6UVK1 2322 aa17.48■□□□□ 0.39
CCS-208ENST00000533244 TLN2Q9Y4G6 2542 aa17.48■□□□□ 0.39
CCS-208ENST00000533244 C17orf100A8MU93 164 aa17.47■□□□□ 0.39
CCS-208ENST00000533244 VWC2LB2RUY7 222 aa17.47■□□□□ 0.39
CCS-208ENST00000533244 H3BNX3 289 aa17.47■□□□□ 0.39
CCS-208ENST00000533244 NAT2P11245 290 aa17.47■□□□□ 0.39
CCS-208ENST00000533244 ZNF23P17027 643 aa17.47■□□□□ 0.39
CCS-208ENST00000533244 GCH1P30793 250 aa17.47■□□□□ 0.39
CCS-208ENST00000533244 RPS27P42677 84 aaKnown RBP17.47■□□□□ 0.39
CCS-208ENST00000533244 RGS6P49758 472 aa17.47■□□□□ 0.39
CCS-208ENST00000533244 ENTPD1P49961 510 aa17.47■□□□□ 0.39
CCS-208ENST00000533244 MMP15P51511 669 aa17.47■□□□□ 0.39
CCS-208ENST00000533244 ESRRGP62508 458 aa17.47■□□□□ 0.39
CCS-208ENST00000533244 ECH1Q13011 328 aa17.47■□□□□ 0.39
CCS-208ENST00000533244 MOGQ16653 247 aa17.47■□□□□ 0.39
CCS-208ENST00000533244 TMEM236Q5W0B7 351 aa17.47■□□□□ 0.39
CCS-208ENST00000533244 ATF6BQ99941 703 aa17.47■□□□□ 0.39
CCS-208ENST00000533244 MARCH7Q9H992 704 aa17.47■□□□□ 0.39
CCS-208ENST00000533244 HINT3Q9NQE9 182 aaKnown RBP17.47■□□□□ 0.39
CCS-208ENST00000533244 DDX28Q9NUL7 540 aaKnown RBP17.47■□□□□ 0.39
CCS-208ENST00000533244 STARD10Q9Y365 291 aa17.47■□□□□ 0.39
CCS-208ENST00000533244 NSD1Q96L73 2696 aaPredicted RBP17.47■□□□□ 0.39
CCS-208ENST00000533244 LOC390937A0A1W2PQ73 354 aa17.47■□□□□ 0.39
CCS-208ENST00000533244 GLCEO94923 617 aa17.47■□□□□ 0.39
CCS-208ENST00000533244 DAOP14920 347 aa17.47■□□□□ 0.39
CCS-208ENST00000533244 PAICSP22234 425 aaKnown RBP17.47■□□□□ 0.39
CCS-208ENST00000533244 COLCA1Q6ZS62 124 aa17.47■□□□□ 0.39
CCS-208ENST00000533244 ZNF786Q8N393 782 aa17.47■□□□□ 0.39
CCS-208ENST00000533244 OR6K6Q8NGW6 343 aa17.47■□□□□ 0.39
CCS-208ENST00000533244 COG8Q96MW5 612 aa17.47■□□□□ 0.39
CCS-208ENST00000533244 PITX2Q99697 317 aa17.47■□□□□ 0.39
CCS-208ENST00000533244 KRT84Q9NSB2 600 aa17.47■□□□□ 0.39
CCS-208ENST00000533244 NKIRAS2Q9NYR9 191 aa17.47■□□□□ 0.39
CCS-208ENST00000533244 TMEFF2Q9UIK5 374 aaPredicted RBP17.47■□□□□ 0.39
CCS-208ENST00000533244 PRR23D1E9PI22 279 aaPredicted RBP17.46■□□□□ 0.39
CCS-208ENST00000533244 MITFO75030 526 aaPredicted RBP17.46■□□□□ 0.39
CCS-208ENST00000533244 ACSM4P0C7M7 580 aa17.46■□□□□ 0.39
CCS-208ENST00000533244 PRR23D2P0DMB1 279 aaPredicted RBP17.46■□□□□ 0.39
CCS-208ENST00000533244 KRTAP1-1Q07627 177 aa17.46■□□□□ 0.39
CCS-208ENST00000533244 PTGES3Q15185 160 aaKnown RBP17.46■□□□□ 0.39
CCS-208ENST00000533244 ALKBH6Q3KRA9 238 aa17.46■□□□□ 0.39
CCS-208ENST00000533244 ZFP1Q6P2D0 407 aa17.46■□□□□ 0.39
CCS-208ENST00000533244 PLBD1Q6P4A8 553 aa17.46■□□□□ 0.39
CCS-208ENST00000533244 SNX33Q8WV41 574 aa17.46■□□□□ 0.39
CCS-208ENST00000533244 SEMA6AQ9H2E6 1030 aa17.46■□□□□ 0.39
CCS-208ENST00000533244 CGGBP1Q9UFW8 167 aaPredicted RBP17.46■□□□□ 0.39
CCS-208ENST00000533244 OAZ3Q9UMX2 235 aa17.46■□□□□ 0.39
CCS-208ENST00000533244 SETD2Q9BYW2 2564 aaPredicted RBP17.46■□□□□ 0.38
CCS-208ENST00000533244 PRODHO43272 600 aa17.45■□□□□ 0.38
CCS-208ENST00000533244 NCR1O76036 304 aa17.45■□□□□ 0.38
CCS-208ENST00000533244 LY6G6DO95868 133 aa17.45■□□□□ 0.38
CCS-208ENST00000533244 HPXP02790 462 aa17.45■□□□□ 0.38
CCS-208ENST00000533244 HEXAP06865 529 aa17.45■□□□□ 0.38
CCS-208ENST00000533244 GIFP27352 417 aa17.45■□□□□ 0.38
CCS-208ENST00000533244 OTX1P32242 354 aaPredicted RBP17.45■□□□□ 0.38
CCS-208ENST00000533244 PPP2R2BQ00005 443 aa17.45■□□□□ 0.38
CCS-208ENST00000533244 LOXL1Q08397 574 aaPredicted RBP17.45■□□□□ 0.38
CCS-208ENST00000533244 PSG7Q13046 419 aa17.45■□□□□ 0.38
CCS-208ENST00000533244 TMEM154Q6P9G4 183 aa17.45■□□□□ 0.38
CCS-208ENST00000533244 CLEC9AQ6UXN8 241 aa17.45■□□□□ 0.38
CCS-208ENST00000533244 DCXRQ7Z4W1 244 aa17.45■□□□□ 0.38
CCS-208ENST00000533244 MAPK1IP1LQ8NDC0 245 aa17.45■□□□□ 0.38
CCS-208ENST00000533244 ST7LQ8TDW4 575 aa17.45■□□□□ 0.38
CCS-208ENST00000533244 UBASH3BQ8TF42 649 aa17.45■□□□□ 0.38
CCS-208ENST00000533244 GTF3AQ92664 365 aaKnown RBP17.45■□□□□ 0.38
CCS-208ENST00000533244 APOBEC3DQ96AK3 386 aaPredicted RBP17.45■□□□□ 0.38
CCS-208ENST00000533244 PKP2Q99959 881 aa17.45■□□□□ 0.38
CCS-208ENST00000533244 C1QTNF5Q9BXJ0 243 aa17.45■□□□□ 0.38
CCS-208ENST00000533244 NF1P21359 2839 aa17.44■□□□□ 0.38
CCS-208ENST00000533244 ZAR1LA6NP61 321 aa17.44■□□□□ 0.38
CCS-208ENST00000533244 ZNF593O00488 134 aaPredicted RBP17.44■□□□□ 0.38
CCS-208ENST00000533244 ADH4P08319 380 aa17.44■□□□□ 0.38
CCS-208ENST00000533244 SPARCP09486 303 aa17.44■□□□□ 0.38
CCS-208ENST00000533244 KITLGP21583 273 aa17.44■□□□□ 0.38
CCS-208ENST00000533244 SLC2A5P22732 501 aa17.44■□□□□ 0.38
CCS-208ENST00000533244 GSTT1P30711 240 aa17.44■□□□□ 0.38
CCS-208ENST00000533244 NR4A2P43354 598 aa17.44■□□□□ 0.38
CCS-208ENST00000533244 MRPS11P82912 194 aaKnown RBP17.44■□□□□ 0.38
CCS-208ENST00000533244 PCGF3Q3KNV8 242 aa17.44■□□□□ 0.38
CCS-208ENST00000533244 FBXW12Q6X9E4 464 aa17.44■□□□□ 0.38
CCS-208ENST00000533244 CPOQ8IVL8 374 aa17.44■□□□□ 0.38
CCS-208ENST00000533244 TIGD4Q8IY51 512 aa17.44■□□□□ 0.38
CCS-208ENST00000533244 INTS14Q96SY0 518 aa17.44■□□□□ 0.38
CCS-208ENST00000533244 CIB1Q99828 191 aa17.44■□□□□ 0.38
CCS-208ENST00000533244 PIMREGQ9BSJ6 248 aa17.44■□□□□ 0.38
CCS-208ENST00000533244 TEX12Q9BXU0 123 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms