RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 TMEM154Q6P9G4 183 aa17.01■□□□□ 0.31
CPSF1-209ENST00000532725 OR10S1Q8NGN2 331 aa17.01■□□□□ 0.31
CPSF1-209ENST00000532725 OR6K6Q8NGW6 343 aa17.01■□□□□ 0.31
CPSF1-209ENST00000532725 KLF14Q8TD94 323 aaPredicted RBP17.01■□□□□ 0.31
CPSF1-209ENST00000532725 OTULINQ96BN8 352 aa17.01■□□□□ 0.31
CPSF1-209ENST00000532725 PITX2Q99697 317 aa17.01■□□□□ 0.31
CPSF1-209ENST00000532725 CIB1Q99828 191 aa17.01■□□□□ 0.31
CPSF1-209ENST00000532725 OR51V1Q9H2C8 321 aa17.01■□□□□ 0.31
CPSF1-209ENST00000532725 MARCH7Q9H992 704 aa17.01■□□□□ 0.31
CPSF1-209ENST00000532725 DYNLRB1Q9NP97 96 aa17.01■□□□□ 0.31
CPSF1-209ENST00000532725 TAAR3PQ9P1P4 343 aa17.01■□□□□ 0.31
CPSF1-209ENST00000532725 STARD10Q9Y365 291 aa17.01■□□□□ 0.31
CPSF1-209ENST00000532725 MTORP42345 2549 aa17.01■□□□□ 0.31
CPSF1-209ENST00000532725 ZAR1LA6NP61 321 aa17■□□□□ 0.31
CPSF1-209ENST00000532725 H7C1Q1 480 aa17■□□□□ 0.31
CPSF1-209ENST00000532725 M0R233 179 aa17■□□□□ 0.31
CPSF1-209ENST00000532725 TUBG1P23258 451 aa17■□□□□ 0.31
CPSF1-209ENST00000532725 MPV17P39210 176 aa17■□□□□ 0.31
CPSF1-209ENST00000532725 ENTPD1P49961 510 aa17■□□□□ 0.31
CPSF1-209ENST00000532725 DSCR9P59020 149 aa17■□□□□ 0.31
CPSF1-209ENST00000532725 ECH1Q13011 328 aa17■□□□□ 0.31
CPSF1-209ENST00000532725 TMEM255AQ5JRV8 349 aa17■□□□□ 0.31
CPSF1-209ENST00000532725 ZNF525Q8N782 197 aa17■□□□□ 0.31
CPSF1-209ENST00000532725 NEU4Q8WWR8 484 aaPredicted RBP17■□□□□ 0.31
CPSF1-209ENST00000532725 C18orf12Q96KH6 178 aa17■□□□□ 0.31
CPSF1-209ENST00000532725 TUBG2Q9NRH3 451 aa17■□□□□ 0.31
CPSF1-209ENST00000532725 SLCO1C1Q9NYB5 712 aa17■□□□□ 0.31
CPSF1-209ENST00000532725 A0A1W2PPW3 197 aa16.99■□□□□ 0.31
CPSF1-209ENST00000532725 SLC2A5P22732 501 aa16.99■□□□□ 0.31
CPSF1-209ENST00000532725 IGFBP5P24593 272 aa16.99■□□□□ 0.31
CPSF1-209ENST00000532725 GSTT1P30711 240 aa16.99■□□□□ 0.31
CPSF1-209ENST00000532725 GCH1P30793 250 aa16.99■□□□□ 0.31
CPSF1-209ENST00000532725 POLR2IP36954 125 aaKnown RBP16.99■□□□□ 0.31
CPSF1-209ENST00000532725 MOGQ16653 247 aa16.99■□□□□ 0.31
CPSF1-209ENST00000532725 SLX4IPQ5VYV7 408 aa16.99■□□□□ 0.31
CPSF1-209ENST00000532725 COLCA1Q6ZS62 124 aa16.99■□□□□ 0.31
CPSF1-209ENST00000532725 PLEKHA8Q96JA3 519 aa16.99■□□□□ 0.31
CPSF1-209ENST00000532725 COX4I2Q96KJ9 171 aa16.99■□□□□ 0.31
CPSF1-209ENST00000532725 ATF6BQ99941 703 aa16.99■□□□□ 0.31
CPSF1-209ENST00000532725 RBM4BQ9BQ04 359 aaKnown RBP16.99■□□□□ 0.31
CPSF1-209ENST00000532725 POFUT1Q9H488 388 aa16.99■□□□□ 0.31
CPSF1-209ENST00000532725 H3BSA7 217 aa16.98■□□□□ 0.31
CPSF1-209ENST00000532725 PRODHO43272 600 aa16.98■□□□□ 0.31
CPSF1-209ENST00000532725 PRKYO43930 277 aa16.98■□□□□ 0.31
CPSF1-209ENST00000532725 SPARCP09486 303 aa16.98■□□□□ 0.31
CPSF1-209ENST00000532725 ACSM4P0C7M7 580 aa16.98■□□□□ 0.31
CPSF1-209ENST00000532725 NAT2P11245 290 aa16.98■□□□□ 0.31
CPSF1-209ENST00000532725 RGS6P49758 472 aa16.98■□□□□ 0.31
CPSF1-209ENST00000532725 ALKBH6Q3KRA9 238 aa16.98■□□□□ 0.31
CPSF1-209ENST00000532725 C12orf73Q69YU5 71 aa16.98■□□□□ 0.31
CPSF1-209ENST00000532725 DCXRQ7Z4W1 244 aa16.98■□□□□ 0.31
CPSF1-209ENST00000532725 NAA40Q86UY6 237 aa16.98■□□□□ 0.31
CPSF1-209ENST00000532725 TIGD4Q8IY51 512 aa16.98■□□□□ 0.31
CPSF1-209ENST00000532725 BBS1Q8NFJ9 593 aa16.98■□□□□ 0.31
CPSF1-209ENST00000532725 IPCEF1Q8WWN9 437 aaPredicted RBP16.98■□□□□ 0.31
CPSF1-209ENST00000532725 RHNO1Q9BSD3 238 aa16.98■□□□□ 0.31
CPSF1-209ENST00000532725 REG4Q9BYZ8 158 aa16.98■□□□□ 0.31
CPSF1-209ENST00000532725 TPK1Q9H3S4 243 aa16.98■□□□□ 0.31
CPSF1-209ENST00000532725 DDX28Q9NUL7 540 aaKnown RBP16.98■□□□□ 0.31
CPSF1-209ENST00000532725 ENOPH1Q9UHY7 261 aa16.98■□□□□ 0.31
CPSF1-209ENST00000532725 GPR160Q9UJ42 338 aa16.98■□□□□ 0.31
CPSF1-209ENST00000532725 IGHV4-30-2A0A087WSY4 118 aa16.97■□□□□ 0.31
CPSF1-209ENST00000532725 F5H5K5 113 aa16.97■□□□□ 0.31
CPSF1-209ENST00000532725 J3QW42 95 aa16.97■□□□□ 0.31
CPSF1-209ENST00000532725 ALPLP05186 524 aa16.97■□□□□ 0.31
CPSF1-209ENST00000532725 ERCC1P07992 297 aaPredicted RBP16.97■□□□□ 0.31
CPSF1-209ENST00000532725 INHBBP09529 407 aa16.97■□□□□ 0.31
CPSF1-209ENST00000532725 MMP15P51511 669 aa16.97■□□□□ 0.31
CPSF1-209ENST00000532725 PSG7Q13046 419 aa16.97■□□□□ 0.31
CPSF1-209ENST00000532725 NKPD1Q17RQ9 610 aa16.97■□□□□ 0.31
CPSF1-209ENST00000532725 KLHL12Q53G59 568 aa16.97■□□□□ 0.31
CPSF1-209ENST00000532725 SLC35D3Q5M8T2 416 aa16.97■□□□□ 0.31
CPSF1-209ENST00000532725 CLEC2AQ6UVW9 174 aa16.97■□□□□ 0.31
CPSF1-209ENST00000532725 CXXC5Q7LFL8 322 aaKnown RBP16.97■□□□□ 0.31
CPSF1-209ENST00000532725 DPY19L4Q7Z388 723 aa16.97■□□□□ 0.31
CPSF1-209ENST00000532725 ST7LQ8TDW4 575 aa16.97■□□□□ 0.31
CPSF1-209ENST00000532725 C10orf105Q8TEF2 133 aa16.97■□□□□ 0.31
CPSF1-209ENST00000532725 APOBEC3DQ96AK3 386 aaPredicted RBP16.97■□□□□ 0.31
CPSF1-209ENST00000532725 CMBLQ96DG6 245 aa16.97■□□□□ 0.31
CPSF1-209ENST00000532725 ZMYND19Q96E35 227 aaPredicted RBP16.97■□□□□ 0.31
CPSF1-209ENST00000532725 COG8Q96MW5 612 aa16.97■□□□□ 0.31
CPSF1-209ENST00000532725 INTS14Q96SY0 518 aa16.97■□□□□ 0.31
CPSF1-209ENST00000532725 C1QTNF5Q9BXJ0 243 aa16.97■□□□□ 0.31
CPSF1-209ENST00000532725 GABARAPL3Q9BY60 117 aa16.97■□□□□ 0.31
CPSF1-209ENST00000532725 CSPG4Q6UVK1 2322 aa16.96■□□□□ 0.31
CPSF1-209ENST00000532725 ZANQ9Y493 2812 aa16.96■□□□□ 0.31
CPSF1-209ENST00000532725 C17orf100A8MU93 164 aa16.96■□□□□ 0.31
CPSF1-209ENST00000532725 RNF223E7ERA6 249 aa16.96■□□□□ 0.31
CPSF1-209ENST00000532725 TLX2O43763 284 aaPredicted RBP16.96■□□□□ 0.31
CPSF1-209ENST00000532725 OTX1P32242 354 aaPredicted RBP16.96■□□□□ 0.31
CPSF1-209ENST00000532725 ERI1Q8IV48 349 aaKnown RBP16.96■□□□□ 0.31
CPSF1-209ENST00000532725 FAM168AQ92567 244 aa16.96■□□□□ 0.31
CPSF1-209ENST00000532725 HAVCR1Q96D42 359 aa16.96■□□□□ 0.31
CPSF1-209ENST00000532725 SLAMF6Q96DU3 332 aa16.96■□□□□ 0.31
CPSF1-209ENST00000532725 TEAD3Q99594 435 aa16.96■□□□□ 0.31
CPSF1-209ENST00000532725 USE1Q9NZ43 259 aa16.96■□□□□ 0.31
CPSF1-209ENST00000532725 SMAD7O15105 426 aaKnown RBP16.95■□□□□ 0.3
CPSF1-209ENST00000532725 CSF3P09919 207 aa16.95■□□□□ 0.3
CPSF1-209ENST00000532725 DAOP14920 347 aa16.95■□□□□ 0.3
CPSF1-209ENST00000532725 PDLIM4P50479 330 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms