RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 PORCNQ9H237 461 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 ZNF430Q9H8G1 570 aaPredicted RBP2.72□□□□□ -1.97
PTPRK-220ENST00000531466 CALHM2Q9HA72 323 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 IL1RL2Q9HB29 575 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 BEX1Q9HBH7 125 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 ANKHQ9HCJ1 492 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 POLD4Q9HCU8 107 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 TMEM138Q9NPI0 162 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 SPANXA1Q9NS26 97 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 ACOXLQ9NUZ1 547 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 NECAP2Q9NVZ3 263 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 SMOXQ9NWM0 555 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 VAPAQ9P0L0 249 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 CLN8Q9UBY8 286 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 RAB26Q9ULW5 256 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 B9D1Q9UPM9 204 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 ALG6Q9Y672 507 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 ALG5Q9Y673 324 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 FAM135AQ9P2D6 1515 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 MSH6P52701 1360 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 ANKRD36BQ8N2N9 1353 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 CLIP1P30622 1438 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 VPS8Q8N3P4 1428 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 TRBV7-9A0A0J9YWB2 115 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 A0A1W2PRF3 423 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 A0A1W2PRM7 423 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 GJE1A6NN92 205 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 PP2D1A8MPX8 630 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 NEDD8-MDP1E9PL57 170 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 M0R296 226 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 SDHDO14521 159 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 MAGEB4O15481 346 aaPredicted RBP2.71□□□□□ -1.98
PTPRK-220ENST00000531466 PSTPIP1O43586 416 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 LRP3O75074 770 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 DCTN3O75935 186 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 OR2J3O76001 311 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 OR7A10O76100 309 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 FARS2O95363 451 aaKnown RBP2.71□□□□□ -1.98
PTPRK-220ENST00000531466 TNFAIP8O95379 198 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 UTS2O95399 124 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 FAM107AO95990 144 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 IFNGP01579 166 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 TCRBP04435 133 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 C2P06681 752 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 PMCHP20382 165 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 PCMT1P22061 227 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 HTR2CP28335 458 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 GNRHRP30968 328 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 CALCRP30988 508 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 CCR7P32248 378 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 SSTR5P35346 364 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 ID1P41134 155 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 CSKP41240 450 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 TNFRSF4P43489 277 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 DNASE1L1P49184 302 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 EIF2B2P49770 351 aaKnown RBP2.71□□□□□ -1.98
PTPRK-220ENST00000531466 CRYBA2P53672 197 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 HSPA2P54652 639 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 PLP1P60201 277 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 RAB2AP61019 212 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 RAP1BP61224 184 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 LSM6P62312 80 aaKnown RBP2.71□□□□□ -1.98
PTPRK-220ENST00000531466 RBX1P62877 108 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 HERV-K104P63124 156 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 AESQ08117 197 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 PSG5Q15238 335 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 TAF1AQ15573 450 aaPredicted RBP2.71□□□□□ -1.98
PTPRK-220ENST00000531466 MAPK14Q16539 360 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 PGGHGQ32M88 737 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 APOBEC3HQ6NTF7 200 aaKnown RBP2.71□□□□□ -1.98
PTPRK-220ENST00000531466 ASCL4Q6XD76 172 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 TMEM179Q6ZVK1 233 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 COX15Q7KZN9 410 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 ABHD13Q7L211 337 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 SSX6Q7RTT6 188 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 H2BFWTQ7Z2G1 175 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 FAM220AQ7Z4H9 259 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 RANBP3LQ86VV4 465 aaPredicted RBP2.71□□□□□ -1.98
PTPRK-220ENST00000531466 CTAGE3PQ8IX95 158 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 DND1Q8IYX4 353 aaKnown RBP2.71□□□□□ -1.98
PTPRK-220ENST00000531466 TMEM123Q8N131 208 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 TMEM156Q8N614 296 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 TMEM251Q8N6I4 163 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 CSNK1A1LQ8N752 337 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 CHDHQ8NE62 594 aaPredicted RBP2.71□□□□□ -1.98
PTPRK-220ENST00000531466 ATP6V1C2Q8NEY4 427 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 B3GNT7Q8NFL0 401 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 OR2AP1Q8NGE2 309 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 SAP25Q8TEE9 199 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 C1orf54Q8WWF1 131 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 PTH2Q96A98 100 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 C10orf35Q96D05 121 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 ZHX1-C8orf76Q96EF9 292 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 MRPL48Q96GC5 212 aaKnown RBP2.71□□□□□ -1.98
PTPRK-220ENST00000531466 TMEM80Q96HE8 168 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 SFRP2Q96HF1 295 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 SH3YL1Q96HL8 342 aaPredicted RBP2.71□□□□□ -1.98
PTPRK-220ENST00000531466 VSTM2LQ96N03 204 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 GPR137Q96N19 417 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 AMDHD1Q96NU7 426 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms