RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 RGS6P49758 472 aa18.82■□□□□ 0.6
TRAPPC4-210ENST00000531290 CCDC92Q53HC0 331 aaPredicted RBP18.82■□□□□ 0.6
TRAPPC4-210ENST00000531290 SMARCD3Q6STE5 483 aa18.82■□□□□ 0.6
TRAPPC4-210ENST00000531290 PTCHD4Q6ZW05 846 aa18.82■□□□□ 0.6
TRAPPC4-210ENST00000531290 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.82■□□□□ 0.6
TRAPPC4-210ENST00000531290 KLHL36Q8N4N3 616 aa18.82■□□□□ 0.6
TRAPPC4-210ENST00000531290 SPICQ8N5J4 248 aa18.82■□□□□ 0.6
TRAPPC4-210ENST00000531290 SUCNR1Q9BXA5 334 aa18.82■□□□□ 0.6
TRAPPC4-210ENST00000531290 IL19Q9UHD0 177 aa18.82■□□□□ 0.6
TRAPPC4-210ENST00000531290 PPP1R3CQ9UQK1 317 aa18.82■□□□□ 0.6
TRAPPC4-210ENST00000531290 V9GYQ6 96 aa18.82■□□□□ 0.6
TRAPPC4-210ENST00000531290 TRIM77I1YAP6 450 aa18.81■□□□□ 0.6
TRAPPC4-210ENST00000531290 J3QW42 95 aa18.81■□□□□ 0.6
TRAPPC4-210ENST00000531290 IGHV2-70P01814 119 aa18.81■□□□□ 0.6
TRAPPC4-210ENST00000531290 RAC2P15153 192 aa18.81■□□□□ 0.6
TRAPPC4-210ENST00000531290 HILS1P60008 231 aa18.81■□□□□ 0.6
TRAPPC4-210ENST00000531290 ACTG1P63261 375 aa18.81■□□□□ 0.6
TRAPPC4-210ENST00000531290 KCNMB1Q16558 191 aa18.81■□□□□ 0.6
TRAPPC4-210ENST00000531290 PGM2L1Q6PCE3 622 aa18.81■□□□□ 0.6
TRAPPC4-210ENST00000531290 Q6ZR03 302 aa18.81■□□□□ 0.6
TRAPPC4-210ENST00000531290 FAM86B1Q8N7N1 296 aa18.81■□□□□ 0.6
TRAPPC4-210ENST00000531290 ATG16L2Q8NAA4 619 aa18.81■□□□□ 0.6
TRAPPC4-210ENST00000531290 GJC3Q8NFK1 279 aa18.81■□□□□ 0.6
TRAPPC4-210ENST00000531290 ERMAPQ96PL5 475 aaPredicted RBP18.81■□□□□ 0.6
TRAPPC4-210ENST00000531290 DCAF16Q9NXF7 216 aa18.81■□□□□ 0.6
TRAPPC4-210ENST00000531290 ATPIF1Q9UII2 106 aa18.81■□□□□ 0.6
TRAPPC4-210ENST00000531290 ARPC2O15144 300 aa18.8■□□□□ 0.6
TRAPPC4-210ENST00000531290 DBHP09172 617 aa18.8■□□□□ 0.6
TRAPPC4-210ENST00000531290 FPR2P25090 351 aa18.8■□□□□ 0.6
TRAPPC4-210ENST00000531290 FXYD6P3P58550 94 aa18.8■□□□□ 0.6
TRAPPC4-210ENST00000531290 SLC27A4Q6P1M0 643 aa18.8■□□□□ 0.6
TRAPPC4-210ENST00000531290 BPIFB2Q8N4F0 458 aa18.8■□□□□ 0.6
TRAPPC4-210ENST00000531290 ZNF283Q8N7M2 679 aa18.8■□□□□ 0.6
TRAPPC4-210ENST00000531290 ITLN1Q8WWA0 313 aa18.8■□□□□ 0.6
TRAPPC4-210ENST00000531290 DHRS1Q96LJ7 313 aa18.8■□□□□ 0.6
TRAPPC4-210ENST00000531290 TSSK2Q96PF2 358 aa18.8■□□□□ 0.6
TRAPPC4-210ENST00000531290 OR2V2Q96R30 315 aa18.8■□□□□ 0.6
TRAPPC4-210ENST00000531290 GPA33Q99795 319 aa18.8■□□□□ 0.6
TRAPPC4-210ENST00000531290 SRA1Q9HD15 236 aaKnown RBP18.8■□□□□ 0.6
TRAPPC4-210ENST00000531290 PTTG3PQ9NZH4 202 aa18.8■□□□□ 0.6
TRAPPC4-210ENST00000531290 PPIAL4EA0A075B759 164 aa18.79■□□□□ 0.6
TRAPPC4-210ENST00000531290 PPIAL4CA0A0B4J2A2 164 aa18.79■□□□□ 0.6
TRAPPC4-210ENST00000531290 PPIAL4DF5H284 164 aa18.79■□□□□ 0.6
TRAPPC4-210ENST00000531290 GADD45GO95257 159 aa18.79■□□□□ 0.6
TRAPPC4-210ENST00000531290 PPP1R3DO95685 299 aa18.79■□□□□ 0.6
TRAPPC4-210ENST00000531290 PPIAL4FP0DN26 164 aa18.79■□□□□ 0.6
TRAPPC4-210ENST00000531290 ZFP36P26651 326 aaKnown RBP18.79■□□□□ 0.6
TRAPPC4-210ENST00000531290 SLC6A6P31641 620 aa18.79■□□□□ 0.6
TRAPPC4-210ENST00000531290 BTG1P62324 171 aa18.79■□□□□ 0.6
TRAPPC4-210ENST00000531290 HNRNPA0Q13151 305 aaKnown RBP18.79■□□□□ 0.6
TRAPPC4-210ENST00000531290 RFX4Q33E94 735 aa18.79■□□□□ 0.6
TRAPPC4-210ENST00000531290 TMEM155Q4W5P6 130 aa18.79■□□□□ 0.6
TRAPPC4-210ENST00000531290 JAZF1Q86VZ6 243 aa18.79■□□□□ 0.6
TRAPPC4-210ENST00000531290 LRRC28Q86X40 367 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC4-210ENST00000531290 OR5AS1Q8N127 324 aa18.79■□□□□ 0.6
TRAPPC4-210ENST00000531290 FANK1Q8TC84 345 aa18.79■□□□□ 0.6
TRAPPC4-210ENST00000531290 FAM216AQ8WUB2 273 aa18.79■□□□□ 0.6
TRAPPC4-210ENST00000531290 GCDHQ92947 438 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC4-210ENST00000531290 APOBEC3DQ96AK3 386 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC4-210ENST00000531290 ZNF582Q96NG8 517 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC4-210ENST00000531290 HDHD2Q9H0R4 259 aa18.79■□□□□ 0.6
TRAPPC4-210ENST00000531290 OPN4Q9UHM6 478 aa18.79■□□□□ 0.6
TRAPPC4-210ENST00000531290 B9D1Q9UPM9 204 aa18.79■□□□□ 0.6
TRAPPC4-210ENST00000531290 GPANK1O95872 356 aa18.78■□□□□ 0.6
TRAPPC4-210ENST00000531290 RENP00797 406 aa18.78■□□□□ 0.6
TRAPPC4-210ENST00000531290 IFNGR2P38484 337 aa18.78■□□□□ 0.6
TRAPPC4-210ENST00000531290 ERFP50548 548 aa18.78■□□□□ 0.6
TRAPPC4-210ENST00000531290 SPIBQ01892 262 aa18.78■□□□□ 0.6
TRAPPC4-210ENST00000531290 HLXQ14774 488 aaPredicted RBP18.78■□□□□ 0.6
TRAPPC4-210ENST00000531290 MEP1BQ16820 701 aa18.78■□□□□ 0.6
TRAPPC4-210ENST00000531290 OR2T2Q6IF00 324 aa18.78■□□□□ 0.6
TRAPPC4-210ENST00000531290 LEG1Q6P5S2 330 aa18.78■□□□□ 0.6
TRAPPC4-210ENST00000531290 FBXW12Q6X9E4 464 aa18.78■□□□□ 0.6
TRAPPC4-210ENST00000531290 TRPM8Q7Z2W7 1104 aa18.78■□□□□ 0.6
TRAPPC4-210ENST00000531290 OR13G1Q8NGZ3 307 aa18.78■□□□□ 0.6
TRAPPC4-210ENST00000531290 COQ7Q99807 217 aa18.78■□□□□ 0.6
TRAPPC4-210ENST00000531290 SLC6A7Q99884 636 aa18.78■□□□□ 0.6
TRAPPC4-210ENST00000531290 FUZQ9BT04 418 aa18.78■□□□□ 0.6
TRAPPC4-210ENST00000531290 RBM4Q9BWF3 364 aaKnown RBP18.78■□□□□ 0.6
TRAPPC4-210ENST00000531290 MUC13Q9H3R2 512 aa18.78■□□□□ 0.6
TRAPPC4-210ENST00000531290 PATZ1Q9HBE1 687 aaKnown RBP18.78■□□□□ 0.6
TRAPPC4-210ENST00000531290 PRPF19Q9UMS4 504 aaKnown RBP18.78■□□□□ 0.6
TRAPPC4-210ENST00000531290 IFNL4K9M1U5 179 aa18.77■□□□□ 0.6
TRAPPC4-210ENST00000531290 OR10H3O60404 316 aa18.77■□□□□ 0.6
TRAPPC4-210ENST00000531290 FABP3P05413 133 aa18.77■□□□□ 0.6
TRAPPC4-210ENST00000531290 NOS3P29474 1203 aa18.77■□□□□ 0.6
TRAPPC4-210ENST00000531290 CORO6Q6QEF8 472 aa18.77■□□□□ 0.6
TRAPPC4-210ENST00000531290 OR6V1Q8N148 313 aa18.77■□□□□ 0.6
TRAPPC4-210ENST00000531290 OR8G5Q8NG78 346 aa18.77■□□□□ 0.6
TRAPPC4-210ENST00000531290 NMNAT3Q96T66 252 aa18.77■□□□□ 0.6
TRAPPC4-210ENST00000531290 IFT27Q9BW83 186 aa18.77■□□□□ 0.6
TRAPPC4-210ENST00000531290 CDADC1Q9BWV3 514 aa18.77■□□□□ 0.6
TRAPPC4-210ENST00000531290 OR52D1Q9H346 318 aa18.77■□□□□ 0.6
TRAPPC4-210ENST00000531290 ACTR3BQ9P1U1 418 aa18.77■□□□□ 0.6
TRAPPC4-210ENST00000531290 TMCC3Q9ULS5 477 aa18.77■□□□□ 0.6
TRAPPC4-210ENST00000531290 LHFPL6Q9Y693 200 aa18.77■□□□□ 0.6
TRAPPC4-210ENST00000531290 NBEAL1Q6ZS30 2694 aa18.77■□□□□ 0.59
TRAPPC4-210ENST00000531290 IGLV1-36A0A0B4J1U3 117 aa18.76■□□□□ 0.59
TRAPPC4-210ENST00000531290 DCTN6O00399 190 aa18.76■□□□□ 0.59
TRAPPC4-210ENST00000531290 ARPC3O15145 178 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms