RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 GPANK1O95872 356 aa13.29□□□□□ -0.28
CPSF1-205ENST00000531042 RGS6P49758 472 aa13.29□□□□□ -0.28
CPSF1-205ENST00000531042 BTG1P62324 171 aa13.29□□□□□ -0.28
CPSF1-205ENST00000531042 HIST1H3AP68431 136 aa13.29□□□□□ -0.28
CPSF1-205ENST00000531042 HLXQ14774 488 aaPredicted RBP13.29□□□□□ -0.28
CPSF1-205ENST00000531042 ZMYND11Q15326 602 aa13.29□□□□□ -0.28
CPSF1-205ENST00000531042 HIST2H3PS2Q5TEC6 136 aa13.29□□□□□ -0.28
CPSF1-205ENST00000531042 SMARCD3Q6STE5 483 aa13.29□□□□□ -0.28
CPSF1-205ENST00000531042 FBXW12Q6X9E4 464 aa13.29□□□□□ -0.28
CPSF1-205ENST00000531042 HIST2H3AQ71DI3 136 aa13.29□□□□□ -0.28
CPSF1-205ENST00000531042 BPIFB2Q8N4F0 458 aa13.29□□□□□ -0.28
CPSF1-205ENST00000531042 DEFB108BQ8NET1 73 aa13.29□□□□□ -0.28
CPSF1-205ENST00000531042 GJC3Q8NFK1 279 aa13.29□□□□□ -0.28
CPSF1-205ENST00000531042 OR52J3Q8NH60 311 aa13.29□□□□□ -0.28
CPSF1-205ENST00000531042 GCDHQ92947 438 aaPredicted RBP13.29□□□□□ -0.28
CPSF1-205ENST00000531042 DVL3Q92997 716 aaPredicted RBP13.29□□□□□ -0.28
CPSF1-205ENST00000531042 TSSK2Q96PF2 358 aa13.29□□□□□ -0.28
CPSF1-205ENST00000531042 OR2V2Q96R30 315 aa13.29□□□□□ -0.28
CPSF1-205ENST00000531042 SPAG4Q9NPE6 437 aa13.29□□□□□ -0.28
CPSF1-205ENST00000531042 ESM1Q9NQ30 184 aa13.29□□□□□ -0.28
CPSF1-205ENST00000531042 MMP26Q9NRE1 261 aa13.29□□□□□ -0.28
CPSF1-205ENST00000531042 PTTG3PQ9NZH4 202 aa13.29□□□□□ -0.28
CPSF1-205ENST00000531042 TRAPPC2LH3BP13 241 aa13.28□□□□□ -0.28
CPSF1-205ENST00000531042 DCTN6O00399 190 aa13.28□□□□□ -0.28
CPSF1-205ENST00000531042 FPR2P25090 351 aa13.28□□□□□ -0.28
CPSF1-205ENST00000531042 CRABP1P29762 137 aa13.28□□□□□ -0.28
CPSF1-205ENST00000531042 PRDX6P30041 224 aa13.28□□□□□ -0.28
CPSF1-205ENST00000531042 SLC6A9P48067 706 aa13.28□□□□□ -0.28
CPSF1-205ENST00000531042 CENPAP49450 140 aa13.28□□□□□ -0.28
CPSF1-205ENST00000531042 SEC61A1P61619 476 aaKnown RBP13.28□□□□□ -0.28
CPSF1-205ENST00000531042 KRT72Q14CN4 511 aa13.28□□□□□ -0.28
CPSF1-205ENST00000531042 MEP1BQ16820 701 aa13.28□□□□□ -0.28
CPSF1-205ENST00000531042 PGM2L1Q6PCE3 622 aa13.28□□□□□ -0.28
CPSF1-205ENST00000531042 DNM1P34Q6PK57 102 aa13.28□□□□□ -0.28
CPSF1-205ENST00000531042 OR5AS1Q8N127 324 aa13.28□□□□□ -0.28
CPSF1-205ENST00000531042 RNF148Q8N7C7 305 aa13.28□□□□□ -0.28
CPSF1-205ENST00000531042 ZDHHC22Q8N966 263 aa13.28□□□□□ -0.28
CPSF1-205ENST00000531042 ATG16L2Q8NAA4 619 aa13.28□□□□□ -0.28
CPSF1-205ENST00000531042 OR5L1Q8NGL2 311 aa13.28□□□□□ -0.28
CPSF1-205ENST00000531042 POP5Q969H6 163 aaKnown RBP13.28□□□□□ -0.28
CPSF1-205ENST00000531042 APOBEC3DQ96AK3 386 aaPredicted RBP13.28□□□□□ -0.28
CPSF1-205ENST00000531042 ERMAPQ96PL5 475 aaPredicted RBP13.28□□□□□ -0.28
CPSF1-205ENST00000531042 COQ7Q99807 217 aa13.28□□□□□ -0.28
CPSF1-205ENST00000531042 ELAC2Q9BQ52 826 aaKnown RBP13.28□□□□□ -0.28
CPSF1-205ENST00000531042 GORASP2Q9H8Y8 452 aa13.28□□□□□ -0.28
CPSF1-205ENST00000531042 GCM1Q9NP62 436 aa13.28□□□□□ -0.28
CPSF1-205ENST00000531042 ADA2Q9NZK5 511 aa13.28□□□□□ -0.28
CPSF1-205ENST00000531042 POLR1DQ9Y2S0 133 aa13.28□□□□□ -0.28
CPSF1-205ENST00000531042 LHFPL6Q9Y693 200 aa13.28□□□□□ -0.28
CPSF1-205ENST00000531042 IGLV1-36A0A0B4J1U3 117 aa13.27□□□□□ -0.29
CPSF1-205ENST00000531042 A8MXK9 166 aa13.27□□□□□ -0.29
CPSF1-205ENST00000531042 F5H0A9 414 aaPredicted RBP13.27□□□□□ -0.29
CPSF1-205ENST00000531042 TMEM178BH3BS89 294 aa13.27□□□□□ -0.29
CPSF1-205ENST00000531042 ATP8B1O43520 1251 aa13.27□□□□□ -0.29
CPSF1-205ENST00000531042 GMNNO75496 209 aa13.27□□□□□ -0.29
CPSF1-205ENST00000531042 PPP1R3DO95685 299 aa13.27□□□□□ -0.29
CPSF1-205ENST00000531042 RFX4Q33E94 735 aa13.27□□□□□ -0.29
CPSF1-205ENST00000531042 OR2T2Q6IF00 324 aa13.27□□□□□ -0.29
CPSF1-205ENST00000531042 SLC27A4Q6P1M0 643 aa13.27□□□□□ -0.29
CPSF1-205ENST00000531042 OR8G5Q8NG78 346 aa13.27□□□□□ -0.29
CPSF1-205ENST00000531042 FANK1Q8TC84 345 aa13.27□□□□□ -0.29
CPSF1-205ENST00000531042 C22orf15Q8WYQ4 148 aa13.27□□□□□ -0.29
CPSF1-205ENST00000531042 PLA2G12AQ9BZM1 189 aa13.27□□□□□ -0.29
CPSF1-205ENST00000531042 HDHD2Q9H0R4 259 aa13.27□□□□□ -0.29
CPSF1-205ENST00000531042 SRA1Q9HD15 236 aaKnown RBP13.27□□□□□ -0.29
CPSF1-205ENST00000531042 B9D1Q9UPM9 204 aa13.27□□□□□ -0.29
CPSF1-205ENST00000531042 INSIG2Q9Y5U4 225 aa13.27□□□□□ -0.29
CPSF1-205ENST00000531042 IFNL4K9M1U5 179 aa13.26□□□□□ -0.29
CPSF1-205ENST00000531042 ARPC3O15145 178 aa13.26□□□□□ -0.29
CPSF1-205ENST00000531042 GADD45GO95257 159 aa13.26□□□□□ -0.29
CPSF1-205ENST00000531042 SEMG1P04279 462 aa13.26□□□□□ -0.29
CPSF1-205ENST00000531042 ZNF12P17014 697 aa13.26□□□□□ -0.29
CPSF1-205ENST00000531042 MDH2P40926 338 aaKnown RBP13.26□□□□□ -0.29
CPSF1-205ENST00000531042 MMP16P51512 607 aa13.26□□□□□ -0.29
CPSF1-205ENST00000531042 SMIM11AP58511 58 aa13.26□□□□□ -0.29
CPSF1-205ENST00000531042 COX10Q12887 443 aa13.26□□□□□ -0.29
CPSF1-205ENST00000531042 ZNF154Q13106 437 aa13.26□□□□□ -0.29
CPSF1-205ENST00000531042 RSPO1Q2MKA7 263 aaPredicted RBP13.26□□□□□ -0.29
CPSF1-205ENST00000531042 TUSC1Q2TAM9 212 aa13.26□□□□□ -0.29
CPSF1-205ENST00000531042 LEG1Q6P5S2 330 aa13.26□□□□□ -0.29
CPSF1-205ENST00000531042 CORO6Q6QEF8 472 aa13.26□□□□□ -0.29
CPSF1-205ENST00000531042 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.26□□□□□ -0.29
CPSF1-205ENST00000531042 JAZF1Q86VZ6 243 aa13.26□□□□□ -0.29
CPSF1-205ENST00000531042 OR6V1Q8N148 313 aa13.26□□□□□ -0.29
CPSF1-205ENST00000531042 MUC20Q8N307 709 aaPredicted RBP13.26□□□□□ -0.29
CPSF1-205ENST00000531042 C3orf56Q8N813 242 aa13.26□□□□□ -0.29
CPSF1-205ENST00000531042 SLC26A10Q8NG04 563 aa13.26□□□□□ -0.29
CPSF1-205ENST00000531042 OR10AD1Q8NGE0 317 aa13.26□□□□□ -0.29
CPSF1-205ENST00000531042 OR13G1Q8NGZ3 307 aa13.26□□□□□ -0.29
CPSF1-205ENST00000531042 PYURFQ96I23 114 aa13.26□□□□□ -0.29
CPSF1-205ENST00000531042 MEGF10Q96KG7 1140 aa13.26□□□□□ -0.29
CPSF1-205ENST00000531042 NMNAT3Q96T66 252 aa13.26□□□□□ -0.29
CPSF1-205ENST00000531042 OR52D1Q9H346 318 aa13.26□□□□□ -0.29
CPSF1-205ENST00000531042 NTN4Q9HB63 628 aa13.26□□□□□ -0.29
CPSF1-205ENST00000531042 AUP1Q9Y679 476 aa13.26□□□□□ -0.29
CPSF1-205ENST00000531042 V9GYQ6 96 aa13.26□□□□□ -0.29
CPSF1-205ENST00000531042 H0YL77 283 aa13.25□□□□□ -0.29
CPSF1-205ENST00000531042 MLNRO43193 412 aa13.25□□□□□ -0.29
CPSF1-205ENST00000531042 RENP00797 406 aa13.25□□□□□ -0.29
CPSF1-205ENST00000531042 WNT2P09544 360 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms