RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 CFAP47Q6ZTR5 3102 aa7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 PIEZO2Q9H5I5 2752 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 MPDZO75970 2070 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 TRBV2A0A0J9YWF9 115 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 TMEM269A0A1B0GVZ9 245 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 C5orf49A4QMS7 147 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 OR6C6A6NF89 314 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 LOC110117498-PIK3R3F6TDL0 507 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 PYCARD-AS1I3L0S3 204 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 SYNGR3O43761 229 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 ZG16O60844 167 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 ABHD16AO95870 558 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 LALBAP00709 142 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 APOC1P02654 83 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 ANXA2P07355 339 aaKnown RBP7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 DBHP09172 617 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 CCL2P13500 99 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 CELP19835 753 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 STOMP27105 288 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 SLC6A9P48067 706 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 TGM4P49221 684 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 CX3CR1P49238 355 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 ZNF83P51522 516 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 IDH3GP51553 393 aaPredicted RBP7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 GP2P55259 537 aaKnown RBP7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 SLC3A1Q07837 685 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 DOC2BQ14184 412 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 PPA1Q15181 289 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 ODF4Q2M2E3 257 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 TIMM23BQ5SRD1 257 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 LIPKQ5VXJ0 399 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 XKRXQ6PP77 449 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 ARL9Q6T311 187 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 RHOUQ7L0Q8 258 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 SATL1Q86VE3 508 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 HAVCR2Q8TDQ0 301 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 HSD17B8Q92506 261 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 SLC7A6Q92536 515 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 RNASE6Q93091 150 aaKnown RBP7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 PGAM5Q96HS1 289 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 BOD1Q96IK1 185 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 OPALINQ96PE5 141 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 SP140LQ9H930 580 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 DDX28Q9NUL7 540 aaKnown RBP7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 OR52A1Q9UKL2 312 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 SIRT4Q9Y6E7 314 aaPredicted RBP7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 R4GMQ9 66 aa7.41□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 MAP1BP46821 2468 aaKnown RBP7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 LOC100509620A0A075B734 347 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 M0R135 149 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 M0R1B8 84 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 CCRL2O00421 344 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 OGG1O15527 345 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 CLDN14O95500 239 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 PNPP00491 289 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 LCATP04180 440 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 SERPINA5P05154 406 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 CELA3BP08861 270 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 COX5BP10606 129 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 SLC2A1P11166 492 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 PPP3CBP16298 524 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 CD36P16671 472 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 CPEP16870 476 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 DCTDP32321 178 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 LIPAP38571 399 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 RGS6P49758 472 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 ZNF121P58317 390 aaPredicted RBP7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 NANOS3P60323 173 aaKnown RBP7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 BDH1Q02338 343 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 MFGE8Q08431 387 aaPredicted RBP7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 ACSM1Q08AH1 577 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 TPBGQ13641 420 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 ALKBH1Q13686 389 aaKnown RBP7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 CDSNQ15517 529 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 TAB1Q15750 504 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 TBC1D28Q2M2D7 210 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 RSPO1Q2MKA7 263 aaPredicted RBP7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 CCDC58Q4VC31 144 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 BCL2L15Q5TBC7 163 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 GPR107Q5VW38 600 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 FAM57BQ71RH2 274 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 NAA40Q86UY6 237 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 CATSPERDQ86XM0 798 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 WFDC8Q8IUA0 241 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 PRSS35Q8N3Z0 413 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 ZNF676Q8N7Q3 588 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 SLC30A7Q8NEW0 376 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 OR1J2Q8NGS2 313 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 OR13F1Q8NGS4 319 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 OR2G2Q8NGZ5 317 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 GHSRQ92847 366 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 TMEM203Q969S6 136 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 PPP1R14AQ96A00 147 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 ZNF799Q96GE5 643 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 ZC3HAV1LQ96H79 300 aaKnown RBP7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 MS4A3Q96HJ5 214 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 DCLRE1CQ96SD1 692 aaKnown RBP7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 DOK1Q99704 481 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 TMED9Q9BVK6 235 aa7.4□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 PBOV1Q9GZY1 135 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms