RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 PLRG1O43660 514 aaKnown RBP11.8□□□□□ -0.52
CAPN1-202ENST00000524773 EIF3GO75821 320 aaKnown RBP eCLIP11.8□□□□□ -0.52
CAPN1-202ENST00000524773 RD3LP0DJH9 198 aa11.8□□□□□ -0.52
CAPN1-202ENST00000524773 NPY4RP50391 375 aa11.8□□□□□ -0.52
CAPN1-202ENST00000524773 ELAVL1Q15717 326 aaKnown RBP11.8□□□□□ -0.52
CAPN1-202ENST00000524773 ALG11Q2TAA5 492 aa11.8□□□□□ -0.52
CAPN1-202ENST00000524773 LYG2Q86SG7 212 aa11.8□□□□□ -0.52
CAPN1-202ENST00000524773 OR51F2Q8NH61 342 aa11.8□□□□□ -0.52
CAPN1-202ENST00000524773 ELSPBP1Q96BH3 223 aa11.8□□□□□ -0.52
CAPN1-202ENST00000524773 IFT22Q9H7X7 185 aa11.8□□□□□ -0.52
CAPN1-202ENST00000524773 PRTFDC1Q9NRG1 225 aa11.8□□□□□ -0.52
CAPN1-202ENST00000524773 OR5AC2Q9NZP5 309 aa11.8□□□□□ -0.52
CAPN1-202ENST00000524773 NDRG3Q9UGV2 375 aa11.8□□□□□ -0.52
CAPN1-202ENST00000524773 A0A1B0GW55 424 aa11.8□□□□□ -0.52
CAPN1-202ENST00000524773 C9JQL5 133 aa11.8□□□□□ -0.52
CAPN1-202ENST00000524773 DUX4L2P0CJ85 424 aa11.8□□□□□ -0.52
CAPN1-202ENST00000524773 DUX4L3P0CJ86 424 aa11.8□□□□□ -0.52
CAPN1-202ENST00000524773 DUX4L4P0CJ87 422 aa11.8□□□□□ -0.52
CAPN1-202ENST00000524773 DUX4L5P0CJ88 424 aa11.8□□□□□ -0.52
CAPN1-202ENST00000524773 DUX4L6P0CJ89 424 aa11.8□□□□□ -0.52
CAPN1-202ENST00000524773 DUX4L7P0CJ90 424 aa11.8□□□□□ -0.52
CAPN1-202ENST00000524773 CD1CP29017 333 aa11.8□□□□□ -0.52
CAPN1-202ENST00000524773 GPR3P46089 330 aa11.8□□□□□ -0.52
CAPN1-202ENST00000524773 HOXA1P49639 335 aaPredicted RBP11.8□□□□□ -0.52
CAPN1-202ENST00000524773 AIMP2Q13155 320 aaKnown RBP11.8□□□□□ -0.52
CAPN1-202ENST00000524773 SKP2Q13309 424 aa11.8□□□□□ -0.52
CAPN1-202ENST00000524773 IGSF11Q5DX21 431 aa11.8□□□□□ -0.52
CAPN1-202ENST00000524773 FAM166AQ6J272 317 aa11.8□□□□□ -0.52
CAPN1-202ENST00000524773 SLC37A2Q8TED4 501 aa11.8□□□□□ -0.52
CAPN1-202ENST00000524773 FOXRED1Q96CU9 486 aaPredicted RBP11.8□□□□□ -0.52
CAPN1-202ENST00000524773 MMABQ96EY8 250 aaPredicted RBP11.8□□□□□ -0.52
CAPN1-202ENST00000524773 LRFN5Q96NI6 719 aa11.8□□□□□ -0.52
CAPN1-202ENST00000524773 GPX7Q96SL4 187 aaPredicted RBP11.8□□□□□ -0.52
CAPN1-202ENST00000524773 SOX7Q9BT81 388 aa11.8□□□□□ -0.52
CAPN1-202ENST00000524773 NUDT9Q9BW91 350 aa11.8□□□□□ -0.52
CAPN1-202ENST00000524773 CNTD2Q9H8S5 307 aa11.8□□□□□ -0.52
CAPN1-202ENST00000524773 CHMP1AQ9HD42 196 aaPredicted RBP11.8□□□□□ -0.52
CAPN1-202ENST00000524773 PRMT8Q9NR22 394 aaPredicted RBP11.8□□□□□ -0.52
CAPN1-202ENST00000524773 DUX4Q9UBX2 424 aa11.8□□□□□ -0.52
CAPN1-202ENST00000524773 CLDN16Q9Y5I7 305 aa11.8□□□□□ -0.52
CAPN1-202ENST00000524773 KLF2Q9Y5W3 355 aaPredicted RBP11.8□□□□□ -0.52
CAPN1-202ENST00000524773 LOC107986453A0A1B0GWG9 222 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 A0A1W2PP11 408 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 SNAPC5O75971 98 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 APODP05090 189 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 POU2F2P09086 479 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 DAOP14920 347 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 MEOX2P50222 304 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 GFOD2Q3B7J2 385 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 OR4K17Q8NGC6 315 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 OR52N4Q8NGI2 321 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 FGGYQ96C11 551 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 PIK3IP1Q96FE7 263 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 SLC25A21Q9BQT8 299 aaPredicted RBP11.79□□□□□ -0.52
CAPN1-202ENST00000524773 G6PC3Q9BUM1 346 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 ALX4Q9H161 411 aaPredicted RBP11.79□□□□□ -0.52
CAPN1-202ENST00000524773 GSKIPQ9P0R6 139 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 CKLFQ9UBR5 152 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 YBX2Q9Y2T7 364 aaKnown RBP11.79□□□□□ -0.52
CAPN1-202ENST00000524773 ICOSLGO75144 302 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 SERPINA5P05154 406 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 MUC1P15941 1255 aaPredicted RBP11.79□□□□□ -0.52
CAPN1-202ENST00000524773 NME2P22392 152 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 COX15Q7KZN9 410 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 ZNF679Q8IYX0 411 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 ZSCAN1Q8NBB4 408 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 FGF14Q92915 247 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 WDR92Q96MX6 357 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 C20orf24Q9BUV8 137 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 RNF126Q9BV68 326 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 POLE3Q9NRF9 147 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 MRPS33Q9Y291 106 aaKnown RBP11.79□□□□□ -0.52
CAPN1-202ENST00000524773 TRBV23-1A0A0A0MS06 115 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 A6NCN8 305 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 C2orf74A8MZ97 194 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 TMEM127O75204 238 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 FBXO24O75426 580 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 HTR3BO95264 441 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 UTS2O95399 124 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 OPN1LWP04000 364 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 ANOS1P23352 680 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 PTGFRP43088 359 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 EGR3Q06889 387 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 SHHQ15465 462 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 ZNF585AQ6P3V2 769 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 C16orf47Q6ZP98 133 aaPredicted RBP11.79□□□□□ -0.52
CAPN1-202ENST00000524773 ADGRE4PQ86SQ3 457 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 TMEM151BQ8IW70 566 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 YAF2Q8IY57 180 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 PAQR4Q8N4S7 273 aaPredicted RBP11.79□□□□□ -0.52
CAPN1-202ENST00000524773 OR5T2Q8NGG2 359 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 PHB2Q99623 299 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 KCNK7Q9Y2U2 307 aa11.79□□□□□ -0.52
CAPN1-202ENST00000524773 IGKV1D-43A0A0B4J1Z2 117 aa11.78□□□□□ -0.52
CAPN1-202ENST00000524773 C17orf105B2RV13 164 aa11.78□□□□□ -0.52
CAPN1-202ENST00000524773 SCDO00767 359 aa11.78□□□□□ -0.52
CAPN1-202ENST00000524773 SLC2A1P11166 492 aa11.78□□□□□ -0.52
CAPN1-202ENST00000524773 ADH6P28332 368 aa11.78□□□□□ -0.52
CAPN1-202ENST00000524773 RFC3P40938 356 aa11.78□□□□□ -0.52
CAPN1-202ENST00000524773 ZNF117Q03924 483 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms