RNA–Protein interactions for RNA: ENST00000523699.5

CDK16-222, Transcript of cyclin dependent kinase 16, human

TSL 5

Gene CDK16, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK16-222	ENST00000523699	FSHB	P01225	129 aa		13.2	□□□□□ -0.3
CDK16-222	ENST00000523699	ZFP36	P26651	326 aa	Known RBP	13.2	□□□□□ -0.3
CDK16-222	ENST00000523699	MMP16	P51512	607 aa		13.2	□□□□□ -0.3
CDK16-222	ENST00000523699	SMIM11A	P58511	58 aa		13.2	□□□□□ -0.3
CDK16-222	ENST00000523699	PSME3	P61289	254 aa		13.2	□□□□□ -0.3
CDK16-222	ENST00000523699	UBA52	P62987	128 aa	Known RBP	13.2	□□□□□ -0.3
CDK16-222	ENST00000523699	ZNF154	Q13106	437 aa		13.2	□□□□□ -0.3
CDK16-222	ENST00000523699	ZMYND11	Q15326	602 aa		13.2	□□□□□ -0.3
CDK16-222	ENST00000523699	C8orf82	Q6P1X6	216 aa	Predicted RBP	13.2	□□□□□ -0.3
CDK16-222	ENST00000523699	FBXW12	Q6X9E4	464 aa		13.2	□□□□□ -0.3
CDK16-222	ENST00000523699		Q6ZR03	302 aa		13.2	□□□□□ -0.3
CDK16-222	ENST00000523699	LRRC28	Q86X40	367 aa	Predicted RBP	13.2	□□□□□ -0.3
CDK16-222	ENST00000523699	DEFB108B	Q8NET1	73 aa		13.2	□□□□□ -0.3
CDK16-222	ENST00000523699	OR10AD1	Q8NGE0	317 aa		13.2	□□□□□ -0.3
CDK16-222	ENST00000523699	OR13G1	Q8NGZ3	307 aa		13.2	□□□□□ -0.3
CDK16-222	ENST00000523699	SGMS2	Q8NHU3	365 aa		13.2	□□□□□ -0.3
CDK16-222	ENST00000523699	SLC7A6	Q92536	515 aa		13.2	□□□□□ -0.3
CDK16-222	ENST00000523699	COQ7	Q99807	217 aa		13.2	□□□□□ -0.3
CDK16-222	ENST00000523699	HCAR1	Q9BXC0	346 aa		13.2	□□□□□ -0.3
CDK16-222	ENST00000523699	MED4	Q9NPJ6	270 aa		13.2	□□□□□ -0.3
CDK16-222	ENST00000523699	NDUFAF4	Q9P032	175 aa		13.2	□□□□□ -0.3
CDK16-222	ENST00000523699	ABCD2	Q9UBJ2	740 aa		13.2	□□□□□ -0.3
CDK16-222	ENST00000523699	NUP50	Q9UKX7	468 aa		13.2	□□□□□ -0.3
CDK16-222	ENST00000523699	LRCH1	Q9Y2L9	728 aa		13.2	□□□□□ -0.3
CDK16-222	ENST00000523699	TRBV4-1	A0A0J9YWV2	114 aa		13.19	□□□□□ -0.3
CDK16-222	ENST00000523699	RER1	O15258	196 aa		13.19	□□□□□ -0.3
CDK16-222	ENST00000523699	SPRY1	O43609	319 aa	Predicted RBP	13.19	□□□□□ -0.3
CDK16-222	ENST00000523699	PTP4A3	O75365	173 aa		13.19	□□□□□ -0.3
CDK16-222	ENST00000523699	PPP1R3D	O95685	299 aa		13.19	□□□□□ -0.3
CDK16-222	ENST00000523699	TXNDC12	O95881	172 aa		13.19	□□□□□ -0.3
CDK16-222	ENST00000523699	REN	P00797	406 aa		13.19	□□□□□ -0.3
CDK16-222	ENST00000523699	RPS2	P15880	293 aa	Known RBP	13.19	□□□□□ -0.3
CDK16-222	ENST00000523699	SELE	P16581	610 aa		13.19	□□□□□ -0.3
CDK16-222	ENST00000523699	ZNF12	P17014	697 aa		13.19	□□□□□ -0.3
CDK16-222	ENST00000523699	CPT2	P23786	658 aa		13.19	□□□□□ -0.3
CDK16-222	ENST00000523699	SLC6A6	P31641	620 aa		13.19	□□□□□ -0.3
CDK16-222	ENST00000523699	MDH1	P40925	334 aa	Known RBP	13.19	□□□□□ -0.3
CDK16-222	ENST00000523699	OMP	P47874	163 aa		13.19	□□□□□ -0.3
CDK16-222	ENST00000523699	SLC6A9	P48067	706 aa		13.19	□□□□□ -0.3
CDK16-222	ENST00000523699	KCNMB1	Q16558	191 aa		13.19	□□□□□ -0.3
CDK16-222	ENST00000523699	CCDC92	Q53HC0	331 aa	Predicted RBP	13.19	□□□□□ -0.3
CDK16-222	ENST00000523699	OTP	Q5XKR4	325 aa		13.19	□□□□□ -0.3
CDK16-222	ENST00000523699	GLYAT	Q6IB77	296 aa		13.19	□□□□□ -0.3
CDK16-222	ENST00000523699	OR2T2	Q6IF00	324 aa		13.19	□□□□□ -0.3
CDK16-222	ENST00000523699	BTNL3	Q6UXE8	466 aa		13.19	□□□□□ -0.3
CDK16-222	ENST00000523699	C1orf87	Q8N0U7	546 aa		13.19	□□□□□ -0.3
CDK16-222	ENST00000523699	OR8G5	Q8NG78	346 aa		13.19	□□□□□ -0.3
CDK16-222	ENST00000523699	MCUR1	Q96AQ8	359 aa		13.19	□□□□□ -0.3
CDK16-222	ENST00000523699	ERMAP	Q96PL5	475 aa	Predicted RBP	13.19	□□□□□ -0.3
CDK16-222	ENST00000523699	GCM1	Q9NP62	436 aa		13.19	□□□□□ -0.3
CDK16-222	ENST00000523699	ADA2	Q9NZK5	511 aa		13.19	□□□□□ -0.3
CDK16-222	ENST00000523699	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	13.19	□□□□□ -0.3
CDK16-222	ENST00000523699	PPIAL4A	Q9Y536	164 aa		13.19	□□□□□ -0.3
CDK16-222	ENST00000523699	INSIG2	Q9Y5U4	225 aa		13.19	□□□□□ -0.3
CDK16-222	ENST00000523699	CEACAM18	A8MTB9	384 aa		13.18	□□□□□ -0.3
CDK16-222	ENST00000523699		F5H0A9	414 aa	Predicted RBP	13.18	□□□□□ -0.3
CDK16-222	ENST00000523699	TMEM178B	H3BS89	294 aa		13.18	□□□□□ -0.3
CDK16-222	ENST00000523699	IMPA2	O14732	288 aa		13.18	□□□□□ -0.3
CDK16-222	ENST00000523699	DBH	P09172	617 aa		13.18	□□□□□ -0.3
CDK16-222	ENST00000523699	IRF2	P14316	349 aa		13.18	□□□□□ -0.3
CDK16-222	ENST00000523699	NOS3	P29474	1203 aa		13.18	□□□□□ -0.3
CDK16-222	ENST00000523699	IFNGR2	P38484	337 aa		13.18	□□□□□ -0.3
CDK16-222	ENST00000523699	ERF	P50548	548 aa		13.18	□□□□□ -0.3
CDK16-222	ENST00000523699	SPIB	Q01892	262 aa		13.18	□□□□□ -0.3
CDK16-222	ENST00000523699	HLX	Q14774	488 aa	Predicted RBP	13.18	□□□□□ -0.3
CDK16-222	ENST00000523699	SLC36A3	Q495N2	470 aa		13.18	□□□□□ -0.3
CDK16-222	ENST00000523699	LEG1	Q6P5S2	330 aa		13.18	□□□□□ -0.3
CDK16-222	ENST00000523699	PTCHD4	Q6ZW05	846 aa		13.18	□□□□□ -0.3
CDK16-222	ENST00000523699	NLRC3	Q7RTR2	1065 aa		13.18	□□□□□ -0.3
CDK16-222	ENST00000523699	SIGLECL1	Q8N7X8	197 aa		13.18	□□□□□ -0.3
CDK16-222	ENST00000523699	ZDHHC22	Q8N966	263 aa		13.18	□□□□□ -0.3
CDK16-222	ENST00000523699	OR2AJ1	Q8NGZ0	328 aa		13.18	□□□□□ -0.3
CDK16-222	ENST00000523699	OR52J3	Q8NH60	311 aa		13.18	□□□□□ -0.3
CDK16-222	ENST00000523699	PLEKHA8	Q96JA3	519 aa		13.18	□□□□□ -0.3
CDK16-222	ENST00000523699	MEGF10	Q96KG7	1140 aa		13.18	□□□□□ -0.3
CDK16-222	ENST00000523699	SIGLEC11	Q96RL6	698 aa		13.18	□□□□□ -0.3
CDK16-222	ENST00000523699	CDADC1	Q9BWV3	514 aa		13.18	□□□□□ -0.3
CDK16-222	ENST00000523699	SSBP3	Q9BWW4	388 aa	Predicted RBP	13.18	□□□□□ -0.3
CDK16-222	ENST00000523699	ESM1	Q9NQ30	184 aa		13.18	□□□□□ -0.3
CDK16-222	ENST00000523699	MMP26	Q9NRE1	261 aa		13.18	□□□□□ -0.3
CDK16-222	ENST00000523699	DCAF13	Q9NV06	445 aa	Known RBP	13.18	□□□□□ -0.3
CDK16-222	ENST00000523699	MAGEL2	Q9UJ55	1249 aa		13.18	□□□□□ -0.3
CDK16-222	ENST00000523699	DIRAS1	O95057	198 aa		13.17	□□□□□ -0.3
CDK16-222	ENST00000523699	GADD45G	O95257	159 aa		13.17	□□□□□ -0.3
CDK16-222	ENST00000523699	SEC61A1	P61619	476 aa	Known RBP	13.17	□□□□□ -0.3
CDK16-222	ENST00000523699	COX10	Q12887	443 aa		13.17	□□□□□ -0.3
CDK16-222	ENST00000523699	FOXL1	Q12952	345 aa		13.17	□□□□□ -0.3
CDK16-222	ENST00000523699	ECH1	Q13011	328 aa		13.17	□□□□□ -0.3
CDK16-222	ENST00000523699	MALL	Q13021	153 aa		13.17	□□□□□ -0.3
CDK16-222	ENST00000523699	HNRNPA0	Q13151	305 aa	Known RBP	13.17	□□□□□ -0.3
CDK16-222	ENST00000523699	SEC23B	Q15437	767 aa		13.17	□□□□□ -0.3
CDK16-222	ENST00000523699	MEP1B	Q16820	701 aa		13.17	□□□□□ -0.3
CDK16-222	ENST00000523699	AWAT1	Q58HT5	328 aa		13.17	□□□□□ -0.3
CDK16-222	ENST00000523699	DOK3	Q7L591	496 aa		13.17	□□□□□ -0.3
CDK16-222	ENST00000523699	TSEN54	Q7Z6J9	526 aa	Known RBP	13.17	□□□□□ -0.3
CDK16-222	ENST00000523699	BHLHE23	Q8NDY6	225 aa		13.17	□□□□□ -0.3
CDK16-222	ENST00000523699	DVL3	Q92997	716 aa	Predicted RBP	13.17	□□□□□ -0.3
CDK16-222	ENST00000523699	IFT27	Q9BW83	186 aa		13.17	□□□□□ -0.3
CDK16-222	ENST00000523699	MS4A7	Q9GZW8	240 aa	Predicted RBP	13.17	□□□□□ -0.3
CDK16-222	ENST00000523699	OR52D1	Q9H346	318 aa		13.17	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms