RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 CT45A7P0DMV0 189 aa2.38□□□□□ -2.03
PCM1-219ENST00000523540 RRM2P31350 389 aa2.38□□□□□ -2.03
PCM1-219ENST00000523540 RAB10P61026 200 aa2.38□□□□□ -2.03
PCM1-219ENST00000523540 PPP1CBP62140 327 aa2.38□□□□□ -2.03
PCM1-219ENST00000523540 PITPNAQ00169 270 aa2.38□□□□□ -2.03
PCM1-219ENST00000523540 SP4Q02446 784 aa2.38□□□□□ -2.03
PCM1-219ENST00000523540 SELENBP1Q13228 472 aa2.38□□□□□ -2.03
PCM1-219ENST00000523540 CT45A1Q5HYN5 189 aa2.38□□□□□ -2.03
PCM1-219ENST00000523540 KPRPQ5T749 579 aaPredicted RBP2.38□□□□□ -2.03
PCM1-219ENST00000523540 PRR9Q5T870 116 aa2.38□□□□□ -2.03
PCM1-219ENST00000523540 PRAMEF20Q5VT98 475 aa2.38□□□□□ -2.03
PCM1-219ENST00000523540 C22orf42Q6IC83 251 aa2.38□□□□□ -2.03
PCM1-219ENST00000523540 NPSR1Q6W5P4 371 aa2.38□□□□□ -2.03
PCM1-219ENST00000523540 FAM43BQ6ZT52 329 aaPredicted RBP2.38□□□□□ -2.03
PCM1-219ENST00000523540 COX18Q8N8Q8 333 aa2.38□□□□□ -2.03
PCM1-219ENST00000523540 C11orf72Q8NBR9 251 aa2.38□□□□□ -2.03
PCM1-219ENST00000523540 LILRB4Q8NHJ6 448 aa2.38□□□□□ -2.03
PCM1-219ENST00000523540 CT45A3Q8NHU0 189 aa2.38□□□□□ -2.03
PCM1-219ENST00000523540 SLC38A4Q969I6 547 aa2.38□□□□□ -2.03
PCM1-219ENST00000523540 TMEM230Q96A57 120 aa2.38□□□□□ -2.03
PCM1-219ENST00000523540 EEF1AKMT3Q96AZ1 226 aa2.38□□□□□ -2.03
PCM1-219ENST00000523540 COL21A1Q96P44 957 aa2.38□□□□□ -2.03
PCM1-219ENST00000523540 EDA2RQ9HAV5 297 aa2.38□□□□□ -2.03
PCM1-219ENST00000523540 CCDC59Q9P031 241 aaKnown RBP2.38□□□□□ -2.03
PCM1-219ENST00000523540 PITPNC1Q9UKF7 332 aa2.38□□□□□ -2.03
PCM1-219ENST00000523540 TRIOBPQ9H2D6 2365 aa2.38□□□□□ -2.03
PCM1-219ENST00000523540 COL22A1Q8NFW1 1626 aaPredicted RBP2.38□□□□□ -2.03
PCM1-219ENST00000523540 PALLDQ8WX93 1383 aa2.37□□□□□ -2.03
PCM1-219ENST00000523540 ANKRD12Q6UB98 2062 aa2.37□□□□□ -2.03
PCM1-219ENST00000523540 TRBV9A0A0B4J1U6 114 aa2.37□□□□□ -2.03
PCM1-219ENST00000523540 K7EMT4 169 aa2.37□□□□□ -2.03
PCM1-219ENST00000523540 SCAMP2O15127 329 aaKnown RBP2.37□□□□□ -2.03
PCM1-219ENST00000523540 RDH16O75452 317 aa2.37□□□□□ -2.03
PCM1-219ENST00000523540 AQP8O94778 261 aa2.37□□□□□ -2.03
PCM1-219ENST00000523540 FTH1P02794 183 aa2.37□□□□□ -2.03
PCM1-219ENST00000523540 PABPC4LP0CB38 370 aaKnown RBP2.37□□□□□ -2.03
PCM1-219ENST00000523540 ERGP11308 486 aa2.37□□□□□ -2.03
PCM1-219ENST00000523540 CDKN2DP55273 166 aa2.37□□□□□ -2.03
PCM1-219ENST00000523540 ZNF616Q08AN1 781 aa2.37□□□□□ -2.03
PCM1-219ENST00000523540 PGGHGQ32M88 737 aa2.37□□□□□ -2.03
PCM1-219ENST00000523540 ARMC12Q5T9G4 340 aa2.37□□□□□ -2.03
PCM1-219ENST00000523540 SNX20Q7Z614 316 aa2.37□□□□□ -2.03
PCM1-219ENST00000523540 CHST4Q8NCG5 386 aa2.37□□□□□ -2.03
PCM1-219ENST00000523540 NUBPLQ8TB37 319 aa2.37□□□□□ -2.03
PCM1-219ENST00000523540 LRRC29Q8WV35 223 aa2.37□□□□□ -2.03
PCM1-219ENST00000523540 CAPSLQ8WWF8 208 aa2.37□□□□□ -2.03
PCM1-219ENST00000523540 ANKRD60Q9BZ19 345 aa2.37□□□□□ -2.03
PCM1-219ENST00000523540 SLC38A10Q9HBR0 1119 aa2.37□□□□□ -2.03
PCM1-219ENST00000523540 TMEM165Q9HC07 324 aa2.37□□□□□ -2.03
PCM1-219ENST00000523540 MTCH1Q9NZJ7 389 aa2.37□□□□□ -2.03
PCM1-219ENST00000523540 SIGLEC9Q9Y336 463 aa2.37□□□□□ -2.03
PCM1-219ENST00000523540 C5orf63A6NC05 138 aa2.36□□□□□ -2.03
PCM1-219ENST00000523540 OR2AG2A6NM03 316 aa2.36□□□□□ -2.03
PCM1-219ENST00000523540 NCBP2LA6PVI3 153 aaKnown RBP2.36□□□□□ -2.03
PCM1-219ENST00000523540 H7C417 338 aa2.36□□□□□ -2.03
PCM1-219ENST00000523540 K7EM74 188 aa2.36□□□□□ -2.03
PCM1-219ENST00000523540 EIF3HO15372 352 aaKnown RBP eCLIP2.36□□□□□ -2.03
PCM1-219ENST00000523540 ARG1P05089 322 aa2.36□□□□□ -2.03
PCM1-219ENST00000523540 IL4P05112 153 aa2.36□□□□□ -2.03
PCM1-219ENST00000523540 U2AF2P26368 475 aaKnown RBP eCLIP2.36□□□□□ -2.031e-20■□□□□ 10.6
PCM1-219ENST00000523540 OTX1P32242 354 aaPredicted RBP2.36□□□□□ -2.03
PCM1-219ENST00000523540 CRISP1P54107 249 aa2.36□□□□□ -2.03
PCM1-219ENST00000523540 SYNJ2BPP57105 145 aa2.36□□□□□ -2.03
PCM1-219ENST00000523540 EIF3EP60228 445 aaKnown RBP2.36□□□□□ -2.03
PCM1-219ENST00000523540 CRADDP78560 199 aa2.36□□□□□ -2.03
PCM1-219ENST00000523540 HMGN5P82970 282 aaKnown RBP2.36□□□□□ -2.03
PCM1-219ENST00000523540 SRSF5Q13243 272 aaKnown RBP2.36□□□□□ -2.03
PCM1-219ENST00000523540 KIR2DS1Q14954 304 aa2.36□□□□□ -2.03
PCM1-219ENST00000523540 MPV17L2Q567V2 206 aa2.36□□□□□ -2.03
PCM1-219ENST00000523540 TCEAL5Q5H9L2 206 aa2.36□□□□□ -2.03
PCM1-219ENST00000523540 LRRC66Q68CR7 880 aa2.36□□□□□ -2.03
PCM1-219ENST00000523540 CMC1Q7Z7K0 106 aa2.36□□□□□ -2.03
PCM1-219ENST00000523540 OR52E2Q8NGJ4 325 aa2.36□□□□□ -2.03
PCM1-219ENST00000523540 TCEAL3Q969E4 200 aa2.36□□□□□ -2.03
PCM1-219ENST00000523540 HSD17B10Q99714 261 aaKnown RBP2.36□□□□□ -2.03
PCM1-219ENST00000523540 CCDC77Q9BR77 488 aa2.36□□□□□ -2.03
PCM1-219ENST00000523540 FGF23Q9GZV9 251 aaPredicted RBP2.36□□□□□ -2.03
PCM1-219ENST00000523540 C8orf17Q9NRJ1 99 aa2.36□□□□□ -2.03
PCM1-219ENST00000523540 MTFP1Q9UDX5 166 aa2.36□□□□□ -2.03
PCM1-219ENST00000523540 SLC17A4Q9Y2C5 497 aa2.36□□□□□ -2.03
PCM1-219ENST00000523540 IGKV1-8A0A0C4DH67 115 aa2.35□□□□□ -2.03
PCM1-219ENST00000523540 WBP4O75554 376 aaKnown RBP2.35□□□□□ -2.03
PCM1-219ENST00000523540 FLOT1O75955 427 aa2.35□□□□□ -2.03
PCM1-219ENST00000523540 SEMA3DO95025 777 aa2.35□□□□□ -2.03
PCM1-219ENST00000523540 PRRX1P54821 245 aa2.35□□□□□ -2.03
PCM1-219ENST00000523540 GFERP55789 205 aa2.35□□□□□ -2.03
PCM1-219ENST00000523540 SEMG2Q02383 582 aa2.35□□□□□ -2.03
PCM1-219ENST00000523540 RNASE13Q5GAN3 156 aaKnown RBP2.35□□□□□ -2.03
PCM1-219ENST00000523540 CCDC183Q5T5S1 534 aa2.35□□□□□ -2.03
PCM1-219ENST00000523540 UNQ9165/PRO28630Q6UXU0 137 aa2.35□□□□□ -2.03
PCM1-219ENST00000523540 OR4C5Q8NGB2 326 aa2.35□□□□□ -2.03
PCM1-219ENST00000523540 RTN4IP1Q8WWV3 396 aaPredicted RBP2.35□□□□□ -2.03
PCM1-219ENST00000523540 SLC25A46Q96AG3 418 aa2.35□□□□□ -2.03
PCM1-219ENST00000523540 DCPSQ96C86 337 aaKnown RBP2.35□□□□□ -2.03
PCM1-219ENST00000523540 ECHDC3Q96DC8 303 aa2.35□□□□□ -2.03
PCM1-219ENST00000523540 TGS1Q96RS0 853 aaKnown RBP2.35□□□□□ -2.03
PCM1-219ENST00000523540 PLIN2Q99541 437 aa2.35□□□□□ -2.03
PCM1-219ENST00000523540 C20orf24Q9BUV8 137 aa2.35□□□□□ -2.03
PCM1-219ENST00000523540 TSPOAP1O95153 1857 aa2.35□□□□□ -2.03
PCM1-219ENST00000523540 A0A0J9YXV3 536 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms