RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 SLIRPQ9GZT3 109 aaKnown RBP11.78□□□□□ -0.52
PCDHGB1-201ENST00000523390 ZNF768Q9H5H4 540 aaKnown RBP11.78□□□□□ -0.52
PCDHGB1-201ENST00000523390 UCK1Q9HA47 277 aa11.78□□□□□ -0.52
PCDHGB1-201ENST00000523390 R4GMQ9 66 aa11.78□□□□□ -0.52
PCDHGB1-201ENST00000523390 TMEM235A6NFC5 223 aa11.78□□□□□ -0.52
PCDHGB1-201ENST00000523390 MCRIP1C9JLW8 97 aa11.78□□□□□ -0.52
PCDHGB1-201ENST00000523390 AIPO00170 330 aa11.78□□□□□ -0.52
PCDHGB1-201ENST00000523390 CTSBP07858 339 aa11.78□□□□□ -0.52
PCDHGB1-201ENST00000523390 INHBBP09529 407 aa11.78□□□□□ -0.52
PCDHGB1-201ENST00000523390 GABRA2P47869 451 aa11.78□□□□□ -0.52
PCDHGB1-201ENST00000523390 EVX1P49640 407 aa11.78□□□□□ -0.52
PCDHGB1-201ENST00000523390 RGS19P49795 217 aa11.78□□□□□ -0.52
PCDHGB1-201ENST00000523390 CCR9P51686 369 aa11.78□□□□□ -0.52
PCDHGB1-201ENST00000523390 PRSS42Q7Z5A4 293 aa11.78□□□□□ -0.52
PCDHGB1-201ENST00000523390 SLC25A45Q8N413 288 aa11.78□□□□□ -0.52
PCDHGB1-201ENST00000523390 SCGB1C1Q8TD33 95 aa11.78□□□□□ -0.52
PCDHGB1-201ENST00000523390 RASL10BQ96S79 203 aa11.78□□□□□ -0.52
PCDHGB1-201ENST00000523390 CRLF2Q9HC73 371 aa11.78□□□□□ -0.52
PCDHGB1-201ENST00000523390 EIF4EP06730 217 aaKnown RBP11.78□□□□□ -0.52
PCDHGB1-201ENST00000523390 ATF4P18848 351 aaPredicted RBP11.78□□□□□ -0.52
PCDHGB1-201ENST00000523390 EIF3IQ13347 325 aaKnown RBP11.78□□□□□ -0.52
PCDHGB1-201ENST00000523390 FZD5Q13467 585 aa11.78□□□□□ -0.52
PCDHGB1-201ENST00000523390 CEACAM16Q2WEN9 425 aa11.78□□□□□ -0.52
PCDHGB1-201ENST00000523390 KANSL1Q7Z3B3 1105 aa11.78□□□□□ -0.52
PCDHGB1-201ENST00000523390 STX12Q86Y82 276 aa11.78□□□□□ -0.52
PCDHGB1-201ENST00000523390 OR5AS1Q8N127 324 aa11.78□□□□□ -0.52
PCDHGB1-201ENST00000523390 PLPP5Q8NEB5 264 aa11.78□□□□□ -0.52
PCDHGB1-201ENST00000523390 OTOSQ8NHW6 89 aa11.78□□□□□ -0.52
PCDHGB1-201ENST00000523390 KCNE4Q8WWG9 221 aa11.78□□□□□ -0.52
PCDHGB1-201ENST00000523390 TM4SF19Q96DZ7 209 aa11.78□□□□□ -0.52
PCDHGB1-201ENST00000523390 SEC22AQ96IW7 307 aa11.78□□□□□ -0.52
PCDHGB1-201ENST00000523390 GPA33Q99795 319 aa11.78□□□□□ -0.52
PCDHGB1-201ENST00000523390 JAM3Q9BX67 310 aa11.78□□□□□ -0.52
PCDHGB1-201ENST00000523390 PRELID1Q9Y255 219 aa11.78□□□□□ -0.52
PCDHGB1-201ENST00000523390 TIMM10BQ9Y5J6 103 aa11.78□□□□□ -0.52
PCDHGB1-201ENST00000523390 NBASA2RRP1 2371 aa11.78□□□□□ -0.52
PCDHGB1-201ENST00000523390 A0A1B0GTH9 108 aa11.77□□□□□ -0.52
PCDHGB1-201ENST00000523390 PCP4L1A6NKN8 68 aa11.77□□□□□ -0.52
PCDHGB1-201ENST00000523390 RRP8O43159 456 aaKnown RBP11.77□□□□□ -0.52
PCDHGB1-201ENST00000523390 SSX4O60224 188 aa11.77□□□□□ -0.52
PCDHGB1-201ENST00000523390 TK1P04183 234 aa11.77□□□□□ -0.52
PCDHGB1-201ENST00000523390 S100A6P06703 90 aa11.77□□□□□ -0.52
PCDHGB1-201ENST00000523390 POU3F3P20264 500 aaPredicted RBP11.77□□□□□ -0.52
PCDHGB1-201ENST00000523390 IL2RGP31785 369 aa11.77□□□□□ -0.52
PCDHGB1-201ENST00000523390 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.77□□□□□ -0.52
PCDHGB1-201ENST00000523390 CMTM4Q8IZR5 234 aa11.77□□□□□ -0.52
PCDHGB1-201ENST00000523390 OR2Y1Q8NGV0 311 aa11.77□□□□□ -0.52
PCDHGB1-201ENST00000523390 GCDHQ92947 438 aaPredicted RBP11.77□□□□□ -0.52
PCDHGB1-201ENST00000523390 OR8B4Q96RC9 309 aa11.77□□□□□ -0.52
PCDHGB1-201ENST00000523390 NKX3-1Q99801 234 aaPredicted RBP11.77□□□□□ -0.52
PCDHGB1-201ENST00000523390 PBOV1Q9GZY1 135 aa11.77□□□□□ -0.52
PCDHGB1-201ENST00000523390 LUZP4Q9P127 313 aa11.77□□□□□ -0.52
PCDHGB1-201ENST00000523390 TCRBV16S1A1N1A0A5B0 115 aa11.77□□□□□ -0.52
PCDHGB1-201ENST00000523390 MAGEB1P43366 347 aa11.77□□□□□ -0.52
PCDHGB1-201ENST00000523390 TAS2R46P59540 309 aa11.77□□□□□ -0.52
PCDHGB1-201ENST00000523390 TAS2R20P59543 309 aa11.77□□□□□ -0.52
PCDHGB1-201ENST00000523390 RRAS2P62070 204 aaPredicted RBP11.77□□□□□ -0.52
PCDHGB1-201ENST00000523390 LTC4SQ16873 150 aa11.77□□□□□ -0.52
PCDHGB1-201ENST00000523390 VASH2Q86V25 355 aa11.77□□□□□ -0.52
PCDHGB1-201ENST00000523390 ZNF709Q8N972 641 aa11.77□□□□□ -0.52
PCDHGB1-201ENST00000523390 TEX19Q8NA77 164 aa11.77□□□□□ -0.52
PCDHGB1-201ENST00000523390 AKR7LQ8NHP1 331 aa11.77□□□□□ -0.52
PCDHGB1-201ENST00000523390 SLC35B4Q969S0 331 aa11.77□□□□□ -0.52
PCDHGB1-201ENST00000523390 FYTTD1Q96QD9 318 aaKnown RBP11.77□□□□□ -0.52
PCDHGB1-201ENST00000523390 TSPAN32Q96QS1 320 aa11.77□□□□□ -0.52
PCDHGB1-201ENST00000523390 SEC22CQ9BRL7 303 aa11.77□□□□□ -0.52
PCDHGB1-201ENST00000523390 DYNLRB1Q9NP97 96 aa11.77□□□□□ -0.52
PCDHGB1-201ENST00000523390 CHD5Q8TDI0 1954 aa11.77□□□□□ -0.52
PCDHGB1-201ENST00000523390 SNAPC5O75971 98 aa11.77□□□□□ -0.53
PCDHGB1-201ENST00000523390 ZNF616Q08AN1 781 aa11.77□□□□□ -0.53
PCDHGB1-201ENST00000523390 DOC2BQ14184 412 aa11.77□□□□□ -0.53
PCDHGB1-201ENST00000523390 TRIP6Q15654 476 aaKnown RBP11.77□□□□□ -0.53
PCDHGB1-201ENST00000523390 BEX5Q5H9J7 111 aa11.77□□□□□ -0.53
PCDHGB1-201ENST00000523390 OR1J2Q8NGS2 313 aa11.77□□□□□ -0.53
PCDHGB1-201ENST00000523390 IMPA2O14732 288 aa11.77□□□□□ -0.53
PCDHGB1-201ENST00000523390 PCMT1P22061 227 aa11.77□□□□□ -0.53
PCDHGB1-201ENST00000523390 TNFSF4P23510 183 aa11.77□□□□□ -0.53
PCDHGB1-201ENST00000523390 TIGD3Q6B0B8 471 aa11.77□□□□□ -0.53
PCDHGB1-201ENST00000523390 ELP2Q6IA86 826 aa11.77□□□□□ -0.53
PCDHGB1-201ENST00000523390 RTL6Q6ICC9 239 aa11.77□□□□□ -0.53
PCDHGB1-201ENST00000523390 NAXDQ8IW45 347 aa11.77□□□□□ -0.53
PCDHGB1-201ENST00000523390 TRIB1Q96RU8 372 aa11.77□□□□□ -0.53
PCDHGB1-201ENST00000523390 GCM2O75603 506 aaPredicted RBP11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 PMP2P02689 132 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 SHBQ15464 509 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 SPAG16Q8N0X2 631 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 OR51S1Q8NGJ8 323 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 NUBPLQ8TB37 319 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 ADGRL4Q9HBW9 690 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 PLSCR3Q9NRY6 295 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 GLTPQ9NZD2 209 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 SMCO3A2RU48 225 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 M0R036 132 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 IFNA5P01569 189 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 CTLA4P16410 223 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 SLC25A1P53007 311 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 ZNF121P58317 390 aaPredicted RBP11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 WDR88Q6ZMY6 472 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 CCDC28AQ8IWP9 274 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 NOXO1Q8NFA2 376 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms