RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 TNFRSF14Q92956 283 aa11.27□□□□□ -0.61
NKX3-1-202ENST00000523261 ERGIC1Q969X5 290 aa11.27□□□□□ -0.61
NKX3-1-202ENST00000523261 MAELQ96JY0 434 aaKnown RBP11.27□□□□□ -0.61
NKX3-1-202ENST00000523261 COG8Q96MW5 612 aa11.27□□□□□ -0.61
NKX3-1-202ENST00000523261 ZNF582Q96NG8 517 aaPredicted RBP11.27□□□□□ -0.61
NKX3-1-202ENST00000523261 DDOQ99489 341 aa11.27□□□□□ -0.61
NKX3-1-202ENST00000523261 WFDC6Q9BQY6 131 aa11.27□□□□□ -0.61
NKX3-1-202ENST00000523261 NUF2Q9BZD4 464 aa11.27□□□□□ -0.61
NKX3-1-202ENST00000523261 SLCO1B3Q9NPD5 702 aa11.27□□□□□ -0.61
NKX3-1-202ENST00000523261 THUMPD1Q9NXG2 353 aaKnown RBP11.27□□□□□ -0.61
NKX3-1-202ENST00000523261 DNAJB11Q9UBS4 358 aa11.27□□□□□ -0.61
NKX3-1-202ENST00000523261 HUWE1Q7Z6Z7 4374 aaKnown RBP11.27□□□□□ -0.61
NKX3-1-202ENST00000523261 A0A1W2PRG6 482 aa11.26□□□□□ -0.61
NKX3-1-202ENST00000523261 RFXANKO14593 260 aa11.26□□□□□ -0.61
NKX3-1-202ENST00000523261 HDAC3O15379 428 aa11.26□□□□□ -0.61
NKX3-1-202ENST00000523261 NDUFA2O43678 99 aa11.26□□□□□ -0.61
NKX3-1-202ENST00000523261 HLA-DPB1P04440 258 aa11.26□□□□□ -0.61
NKX3-1-202ENST00000523261 NUDT7P0C024 238 aa11.26□□□□□ -0.61
NKX3-1-202ENST00000523261 ASAH2BP0C7U1 165 aa11.26□□□□□ -0.61
NKX3-1-202ENST00000523261 ETS2P15036 469 aa11.26□□□□□ -0.61
NKX3-1-202ENST00000523261 UGT2B15P54855 530 aa11.26□□□□□ -0.61
NKX3-1-202ENST00000523261 RGS8P57771 180 aaPredicted RBP11.26□□□□□ -0.61
NKX3-1-202ENST00000523261 CD83Q01151 205 aa11.26□□□□□ -0.61
NKX3-1-202ENST00000523261 LRRC74AQ0VAA2 488 aa11.26□□□□□ -0.61
NKX3-1-202ENST00000523261 MEPCEQ7L2J0 689 aaKnown RBP11.26□□□□□ -0.61
NKX3-1-202ENST00000523261 HDDC2Q7Z4H3 204 aa11.26□□□□□ -0.61
NKX3-1-202ENST00000523261 C10orf111Q8N326 155 aa11.26□□□□□ -0.61
NKX3-1-202ENST00000523261 FGFRL1Q8N441 504 aa11.26□□□□□ -0.61
NKX3-1-202ENST00000523261 Q8N7P7 452 aa11.26□□□□□ -0.61
NKX3-1-202ENST00000523261 CELF2-AS1Q8N7Q2 184 aa11.26□□□□□ -0.61
NKX3-1-202ENST00000523261 SDR9C7Q8NEX9 313 aa11.26□□□□□ -0.61
NKX3-1-202ENST00000523261 C17orf50Q8WW18 174 aa11.26□□□□□ -0.61
NKX3-1-202ENST00000523261 HDAC2Q92769 488 aaKnown RBP11.26□□□□□ -0.61
NKX3-1-202ENST00000523261 DPF1Q92782 380 aa11.26□□□□□ -0.61
NKX3-1-202ENST00000523261 MAL2Q969L2 176 aa11.26□□□□□ -0.61
NKX3-1-202ENST00000523261 NKX3-1Q99801 234 aaPredicted RBP11.26□□□□□ -0.61
NKX3-1-202ENST00000523261 CHID1Q9BWS9 393 aa11.26□□□□□ -0.61
NKX3-1-202ENST00000523261 TPT1P8Q9HAU6 139 aa11.26□□□□□ -0.61
NKX3-1-202ENST00000523261 UFSP2Q9NUQ7 469 aa11.26□□□□□ -0.61
NKX3-1-202ENST00000523261 ZNF229Q9UJW7 825 aa11.26□□□□□ -0.61
NKX3-1-202ENST00000523261 WDR91A4D1P6 747 aa11.25□□□□□ -0.61
NKX3-1-202ENST00000523261 FMO6PO60774 539 aa11.25□□□□□ -0.61
NKX3-1-202ENST00000523261 CHRM2P08172 466 aa11.25□□□□□ -0.61
NKX3-1-202ENST00000523261 KRT4P19013 534 aa11.25□□□□□ -0.61
NKX3-1-202ENST00000523261 SERPINB5P36952 375 aa11.25□□□□□ -0.61
NKX3-1-202ENST00000523261 HTR5AP47898 357 aa11.25□□□□□ -0.61
NKX3-1-202ENST00000523261 NME5P56597 212 aa11.25□□□□□ -0.61
NKX3-1-202ENST00000523261 UFM1P61960 85 aa11.25□□□□□ -0.61
NKX3-1-202ENST00000523261 ACSM1Q08AH1 577 aa11.25□□□□□ -0.61
NKX3-1-202ENST00000523261 MPPED2Q15777 294 aa11.25□□□□□ -0.61
NKX3-1-202ENST00000523261 LRRC75BQ2VPJ9 315 aa11.25□□□□□ -0.61
NKX3-1-202ENST00000523261 ARMC4Q5T2S8 1044 aa11.25□□□□□ -0.61
NKX3-1-202ENST00000523261 PRAMEF6Q5VXH4 476 aa11.25□□□□□ -0.61
NKX3-1-202ENST00000523261 C1orf94Q6P1W5 598 aa11.25□□□□□ -0.61
NKX3-1-202ENST00000523261 FOXL2NBQ6ZUU3 175 aa11.25□□□□□ -0.61
NKX3-1-202ENST00000523261 TRMT10CQ7L0Y3 403 aaKnown RBP11.25□□□□□ -0.61
NKX3-1-202ENST00000523261 NANOGNBQ7Z5D8 188 aa11.25□□□□□ -0.61
NKX3-1-202ENST00000523261 SYT9Q86SS6 491 aa11.25□□□□□ -0.61
NKX3-1-202ENST00000523261 CMTM4Q8IZR5 234 aa11.25□□□□□ -0.61
NKX3-1-202ENST00000523261 C4orf33Q8N1A6 199 aa11.25□□□□□ -0.61
NKX3-1-202ENST00000523261 BOLLQ8N9W6 283 aaKnown RBP11.25□□□□□ -0.61
NKX3-1-202ENST00000523261 BHLHE23Q8NDY6 225 aa11.25□□□□□ -0.61
NKX3-1-202ENST00000523261 ST8SIA4Q92187 359 aa11.25□□□□□ -0.61
NKX3-1-202ENST00000523261 VPS33AQ96AX1 596 aa11.25□□□□□ -0.61
NKX3-1-202ENST00000523261 ECSITQ9BQ95 431 aa11.25□□□□□ -0.61
NKX3-1-202ENST00000523261 DCTN5Q9BTE1 182 aa11.25□□□□□ -0.61
NKX3-1-202ENST00000523261 GPR61Q9BZJ8 451 aa11.25□□□□□ -0.61
NKX3-1-202ENST00000523261 PALMDQ9NP74 551 aa11.25□□□□□ -0.61
NKX3-1-202ENST00000523261 PTTG3PQ9NZH4 202 aa11.25□□□□□ -0.61
NKX3-1-202ENST00000523261 RNF7Q9UBF6 113 aa11.25□□□□□ -0.61
NKX3-1-202ENST00000523261 IQCF6A8MYZ5 107 aa11.24□□□□□ -0.61
NKX3-1-202ENST00000523261 BLOC1S5-TXNDC5H3BN57 136 aa11.24□□□□□ -0.61
NKX3-1-202ENST00000523261 DOK2O60496 412 aa11.24□□□□□ -0.61
NKX3-1-202ENST00000523261 GYPAP02724 150 aa11.24□□□□□ -0.61
NKX3-1-202ENST00000523261 HIST1H2ABP04908 130 aa11.24□□□□□ -0.61
NKX3-1-202ENST00000523261 FPR3P25089 353 aa11.24□□□□□ -0.61
NKX3-1-202ENST00000523261 CD200P41217 278 aa11.24□□□□□ -0.61
NKX3-1-202ENST00000523261 RGS6P49758 472 aa11.24□□□□□ -0.61
NKX3-1-202ENST00000523261 DAP3P51398 398 aaKnown RBP11.24□□□□□ -0.61
NKX3-1-202ENST00000523261 UBE2E1P51965 193 aa11.24□□□□□ -0.61
NKX3-1-202ENST00000523261 RPL18Q07020 188 aaKnown RBP11.24□□□□□ -0.61
NKX3-1-202ENST00000523261 CD47Q08722 323 aa11.24□□□□□ -0.61
NKX3-1-202ENST00000523261 OR8B8Q15620 311 aa11.24□□□□□ -0.61
NKX3-1-202ENST00000523261 GTDC1Q4AE62 458 aa11.24□□□□□ -0.61
NKX3-1-202ENST00000523261 LIAT1Q6ZQX7 453 aa11.24□□□□□ -0.61
NKX3-1-202ENST00000523261 HIST3H2AQ7L7L0 130 aa11.24□□□□□ -0.61
NKX3-1-202ENST00000523261 SLC30A8Q8IWU4 369 aa11.24□□□□□ -0.61
NKX3-1-202ENST00000523261 Q8NFD4 153 aa11.24□□□□□ -0.61
NKX3-1-202ENST00000523261 OR51G2Q8NGK0 314 aa11.24□□□□□ -0.61
NKX3-1-202ENST00000523261 SLC7A6Q92536 515 aa11.24□□□□□ -0.61
NKX3-1-202ENST00000523261 HIST1H2ACQ93077 130 aa11.24□□□□□ -0.61
NKX3-1-202ENST00000523261 AJUBAQ96IF1 538 aa11.24□□□□□ -0.61
NKX3-1-202ENST00000523261 DMRTB1Q96MA1 342 aa11.24□□□□□ -0.61
NKX3-1-202ENST00000523261 OR5M11Q96RB7 305 aa11.24□□□□□ -0.61
NKX3-1-202ENST00000523261 ASCL2Q99929 193 aa11.24□□□□□ -0.61
NKX3-1-202ENST00000523261 MEGF9Q9H1U4 602 aa11.24□□□□□ -0.61
NKX3-1-202ENST00000523261 TRIM36Q9NQ86 728 aa11.24□□□□□ -0.61
NKX3-1-202ENST00000523261 TMEM100Q9NV29 134 aa11.24□□□□□ -0.61
NKX3-1-202ENST00000523261 LSM4Q9Y4Z0 139 aaKnown RBP11.24□□□□□ -0.61
NKX3-1-202ENST00000523261 TRAV38-1A0A0B4J264 116 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms