RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 CALB2P22676 271 aa13.76□□□□□ -0.21
CLN8-206ENST00000523237 MAGEA2P43356 314 aa13.76□□□□□ -0.21
CLN8-206ENST00000523237 HIST1H3AP68431 136 aa13.76□□□□□ -0.21
CLN8-206ENST00000523237 COX10Q12887 443 aa13.76□□□□□ -0.21
CLN8-206ENST00000523237 CDK5R2Q13319 367 aa13.76□□□□□ -0.21
CLN8-206ENST00000523237 SLC36A3Q495N2 470 aa13.76□□□□□ -0.21
CLN8-206ENST00000523237 HIST2H3PS2Q5TEC6 136 aa13.76□□□□□ -0.21
CLN8-206ENST00000523237 HIST2H3AQ71DI3 136 aa13.76□□□□□ -0.21
CLN8-206ENST00000523237 ZBTB46Q86UZ6 589 aa13.76□□□□□ -0.21
CLN8-206ENST00000523237 DHFR2Q86XF0 187 aa13.76□□□□□ -0.21
CLN8-206ENST00000523237 CCDC197Q8NCU1 140 aa13.76□□□□□ -0.21
CLN8-206ENST00000523237 SDR9C7Q8NEX9 313 aa13.76□□□□□ -0.21
CLN8-206ENST00000523237 SLC26A10Q8NG04 563 aa13.76□□□□□ -0.21
CLN8-206ENST00000523237 PTP4A1Q93096 173 aa13.76□□□□□ -0.21
CLN8-206ENST00000523237 POP5Q969H6 163 aaKnown RBP13.76□□□□□ -0.21
CLN8-206ENST00000523237 CMBLQ96DG6 245 aa13.76□□□□□ -0.21
CLN8-206ENST00000523237 COQ7Q99807 217 aa13.76□□□□□ -0.21
CLN8-206ENST00000523237 TRIM15Q9C019 465 aa13.76□□□□□ -0.21
CLN8-206ENST00000523237 MAGIXQ9H6Y5 334 aa13.76□□□□□ -0.21
CLN8-206ENST00000523237 CDH10Q9Y6N8 788 aa13.76□□□□□ -0.21
CLN8-206ENST00000523237 OR6C68A6NDL8 312 aa13.75□□□□□ -0.21
CLN8-206ENST00000523237 CCNB2O95067 398 aa13.75□□□□□ -0.21
CLN8-206ENST00000523237 HLA-DQA2P01906 255 aa13.75□□□□□ -0.21
CLN8-206ENST00000523237 RAC2P15153 192 aa13.75□□□□□ -0.21
CLN8-206ENST00000523237 TNFRSF1AP19438 455 aa13.75□□□□□ -0.21
CLN8-206ENST00000523237 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.75□□□□□ -0.21
CLN8-206ENST00000523237 TRIM25Q14258 630 aaKnown RBP13.75□□□□□ -0.21
CLN8-206ENST00000523237 CLEC12AQ5QGZ9 265 aa13.75□□□□□ -0.21
CLN8-206ENST00000523237 SLC35F1Q5T1Q4 408 aa13.75□□□□□ -0.21
CLN8-206ENST00000523237 LCN8Q6JVE9 175 aa13.75□□□□□ -0.21
CLN8-206ENST00000523237 CORO6Q6QEF8 472 aa13.75□□□□□ -0.21
CLN8-206ENST00000523237 OR2Z1Q8NG97 314 aa13.75□□□□□ -0.21
CLN8-206ENST00000523237 OR9Q2Q8NGE9 314 aa13.75□□□□□ -0.21
CLN8-206ENST00000523237 OR52E2Q8NGJ4 325 aa13.75□□□□□ -0.21
CLN8-206ENST00000523237 APOBEC3DQ96AK3 386 aaPredicted RBP13.75□□□□□ -0.21
CLN8-206ENST00000523237 GAL3ST1Q99999 423 aa13.75□□□□□ -0.21
CLN8-206ENST00000523237 BTBD10Q9BSF8 475 aa13.75□□□□□ -0.21
CLN8-206ENST00000523237 CDADC1Q9BWV3 514 aa13.75□□□□□ -0.21
CLN8-206ENST00000523237 FN3KQ9H479 309 aa13.75□□□□□ -0.21
CLN8-206ENST00000523237 EGLN3Q9H6Z9 239 aa13.75□□□□□ -0.21
CLN8-206ENST00000523237 DNHD1Q96M86 4753 aa13.75□□□□□ -0.21
CLN8-206ENST00000523237 TCRBV5S2A0A599 114 aa13.74□□□□□ -0.21
CLN8-206ENST00000523237 ISPDA4D126 451 aa13.74□□□□□ -0.21
CLN8-206ENST00000523237 SURF4O15260 269 aa13.74□□□□□ -0.21
CLN8-206ENST00000523237 IGHV2-5P01817 119 aa13.74□□□□□ -0.21
CLN8-206ENST00000523237 FAM98BQ52LJ0 330 aaKnown RBP13.74□□□□□ -0.21
CLN8-206ENST00000523237 SLC18B1Q6NT16 456 aa13.74□□□□□ -0.21
CLN8-206ENST00000523237 FBXW12Q6X9E4 464 aa13.74□□□□□ -0.21
CLN8-206ENST00000523237 Q6ZR03 302 aa13.74□□□□□ -0.21
CLN8-206ENST00000523237 RFLNBQ8N5W9 214 aa13.74□□□□□ -0.21
CLN8-206ENST00000523237 OR4C15Q8NGM1 316 aa13.74□□□□□ -0.21
CLN8-206ENST00000523237 OR2AJ1Q8NGZ0 328 aa13.74□□□□□ -0.21
CLN8-206ENST00000523237 PITX2Q99697 317 aa13.74□□□□□ -0.21
CLN8-206ENST00000523237 IL20Q9NYY1 176 aa13.74□□□□□ -0.21
CLN8-206ENST00000523237 PTTG3PQ9NZH4 202 aa13.74□□□□□ -0.21
CLN8-206ENST00000523237 PRPF19Q9UMS4 504 aaKnown RBP13.74□□□□□ -0.21
CLN8-206ENST00000523237 SVEP1Q4LDE5 3571 aa13.73□□□□□ -0.21
CLN8-206ENST00000523237 BHLHE40O14503 412 aa13.73□□□□□ -0.21
CLN8-206ENST00000523237 DYNC1I1O14576 645 aa13.73□□□□□ -0.21
CLN8-206ENST00000523237 DEAF1O75398 565 aaPredicted RBP13.73□□□□□ -0.21
CLN8-206ENST00000523237 PNPP00491 289 aa13.73□□□□□ -0.21
CLN8-206ENST00000523237 GASTP01350 101 aa13.73□□□□□ -0.21
CLN8-206ENST00000523237 DBPQ10586 325 aaPredicted RBP13.73□□□□□ -0.21
CLN8-206ENST00000523237 ECH1Q13011 328 aa13.73□□□□□ -0.21
CLN8-206ENST00000523237 KRTAP24-1Q3LI83 254 aa13.73□□□□□ -0.21
CLN8-206ENST00000523237 SPRNQ5BIV9 151 aa13.73□□□□□ -0.21
CLN8-206ENST00000523237 LIPNQ5VXI9 398 aa13.73□□□□□ -0.21
CLN8-206ENST00000523237 ZNF770Q6IQ21 691 aaPredicted RBP13.73□□□□□ -0.21
CLN8-206ENST00000523237 FAHD2BQ6P2I3 314 aaPredicted RBP13.73□□□□□ -0.21
CLN8-206ENST00000523237 SHQ1Q6PI26 577 aaKnown RBP13.73□□□□□ -0.21
CLN8-206ENST00000523237 CFAP77Q6ZQR2 320 aa13.73□□□□□ -0.21
CLN8-206ENST00000523237 RASSF6Q6ZTQ3 369 aa13.73□□□□□ -0.21
CLN8-206ENST00000523237 LINC00346Q8IVM7 164 aa13.73□□□□□ -0.21
CLN8-206ENST00000523237 FAHD2AQ96GK7 314 aa13.73□□□□□ -0.21
CLN8-206ENST00000523237 ATF6BQ99941 703 aa13.73□□□□□ -0.21
CLN8-206ENST00000523237 REEP1Q9H902 201 aa13.73□□□□□ -0.21
CLN8-206ENST00000523237 TBC1D23Q9NUY8 699 aa13.73□□□□□ -0.21
CLN8-206ENST00000523237 IL19Q9UHD0 177 aa13.73□□□□□ -0.21
CLN8-206ENST00000523237 CYB5R1Q9UHQ9 305 aa13.73□□□□□ -0.21
CLN8-206ENST00000523237 KCNG2Q9UJ96 466 aa13.73□□□□□ -0.21
CLN8-206ENST00000523237 METRNQ9UJH8 293 aa13.73□□□□□ -0.21
CLN8-206ENST00000523237 TCF21O43680 179 aa13.72□□□□□ -0.21
CLN8-206ENST00000523237 PLPP2O43688 288 aa13.72□□□□□ -0.21
CLN8-206ENST00000523237 T-ENOLP0DO92 83 aa13.72□□□□□ -0.21
CLN8-206ENST00000523237 ERFP50548 548 aa13.72□□□□□ -0.21
CLN8-206ENST00000523237 MS4A2Q01362 244 aa13.72□□□□□ -0.21
CLN8-206ENST00000523237 HLXQ14774 488 aaPredicted RBP13.72□□□□□ -0.21
CLN8-206ENST00000523237 OR2T5Q6IEZ7 315 aa13.72□□□□□ -0.21
CLN8-206ENST00000523237 SLC27A4Q6P1M0 643 aa13.72□□□□□ -0.21
CLN8-206ENST00000523237 OR5AS1Q8N127 324 aa13.72□□□□□ -0.21
CLN8-206ENST00000523237 TEX29Q8N6K0 151 aa13.72□□□□□ -0.21
CLN8-206ENST00000523237 ATG16L2Q8NAA4 619 aa13.72□□□□□ -0.21
CLN8-206ENST00000523237 AQP11Q8NBQ7 271 aa13.72□□□□□ -0.21
CLN8-206ENST00000523237 OR8G5Q8NG78 346 aa13.72□□□□□ -0.21
CLN8-206ENST00000523237 OR2T4Q8NH00 348 aa13.72□□□□□ -0.21
CLN8-206ENST00000523237 OR2T29Q8NH02 315 aa13.72□□□□□ -0.21
CLN8-206ENST00000523237 ITLN1Q8WWA0 313 aa13.72□□□□□ -0.21
CLN8-206ENST00000523237 ASB9Q96DX5 294 aa13.72□□□□□ -0.21
CLN8-206ENST00000523237 LRGUKQ96M69 825 aa13.72□□□□□ -0.21
CLN8-206ENST00000523237 ZNF582Q96NG8 517 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms