RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 AGAP4Q96P64 663 aa16.33■□□□□ 0.21
TRAPPC9-210ENST00000521667 ZNF416Q9BWM5 594 aa16.33■□□□□ 0.21
TRAPPC9-210ENST00000521667 ULBP2Q9BZM5 246 aa16.33■□□□□ 0.21
TRAPPC9-210ENST00000521667 RCE1Q9Y256 329 aa16.33■□□□□ 0.21
TRAPPC9-210ENST00000521667 ASPMQ8IZT6 3477 aa16.33■□□□□ 0.2
TRAPPC9-210ENST00000521667 RFC3P40938 356 aa16.33■□□□□ 0.2
TRAPPC9-210ENST00000521667 PDSS1Q5T2R2 415 aa16.33■□□□□ 0.2
TRAPPC9-210ENST00000521667 PLET1Q6UQ28 207 aa16.33■□□□□ 0.2
TRAPPC9-210ENST00000521667 GALNT16Q8N428 558 aa16.33■□□□□ 0.2
TRAPPC9-210ENST00000521667 ROBO4Q8WZ75 1007 aa16.33■□□□□ 0.2
TRAPPC9-210ENST00000521667 YIPF5Q969M3 257 aa16.33■□□□□ 0.2
TRAPPC9-210ENST00000521667 HAVCR1Q96D42 359 aa16.33■□□□□ 0.2
TRAPPC9-210ENST00000521667 RBM24Q9BX46 236 aaKnown RBP16.33■□□□□ 0.2
TRAPPC9-210ENST00000521667 DDX28Q9NUL7 540 aaKnown RBP16.33■□□□□ 0.2
TRAPPC9-210ENST00000521667 NUFIP1Q9UHK0 495 aaKnown RBP16.33■□□□□ 0.2
TRAPPC9-210ENST00000521667 FAM240BA0A1B0GVZ2 78 aa16.32■□□□□ 0.2
TRAPPC9-210ENST00000521667 GSTZ1O43708 216 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC9-210ENST00000521667 FAM157BP0CG42 384 aa16.32■□□□□ 0.2
TRAPPC9-210ENST00000521667 DGCR2P98153 550 aa16.32■□□□□ 0.2
TRAPPC9-210ENST00000521667 AKAP14Q86UN6 197 aa16.32■□□□□ 0.2
TRAPPC9-210ENST00000521667 CPNE4Q96A23 557 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC9-210ENST00000521667 NABP1Q96AH0 204 aa16.32■□□□□ 0.2
TRAPPC9-210ENST00000521667 ZNF775Q96BV0 537 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC9-210ENST00000521667 ITPKCQ96DU7 683 aa16.32■□□□□ 0.2
TRAPPC9-210ENST00000521667 TTTY12Q9BZ98 90 aa16.32■□□□□ 0.2
TRAPPC9-210ENST00000521667 RNF121Q9H920 327 aa16.32■□□□□ 0.2
TRAPPC9-210ENST00000521667 NPAP1Q9NZP6 1156 aa16.32■□□□□ 0.2
TRAPPC9-210ENST00000521667 DOCK10Q96BY6 2186 aa16.32■□□□□ 0.2
TRAPPC9-210ENST00000521667 CACNA1CQ13936 2221 aa16.32■□□□□ 0.2
TRAPPC9-210ENST00000521667 NCKAP5O14513 1909 aa16.31■□□□□ 0.2
TRAPPC9-210ENST00000521667 SLC17A2O00624 439 aa16.31■□□□□ 0.2
TRAPPC9-210ENST00000521667 CDK2AP1O14519 115 aa16.31■□□□□ 0.2
TRAPPC9-210ENST00000521667 ITGA5P08648 1049 aa16.31■□□□□ 0.2
TRAPPC9-210ENST00000521667 CD3GP09693 182 aa16.31■□□□□ 0.2
TRAPPC9-210ENST00000521667 ZNF84P51523 738 aa16.31■□□□□ 0.2
TRAPPC9-210ENST00000521667 PRKXP51817 358 aa16.31■□□□□ 0.2
TRAPPC9-210ENST00000521667 GPR176Q14439 515 aa16.31■□□□□ 0.2
TRAPPC9-210ENST00000521667 RAB11BQ15907 218 aa16.31■□□□□ 0.2
TRAPPC9-210ENST00000521667 GLT8D1Q68CQ7 371 aa16.31■□□□□ 0.2
TRAPPC9-210ENST00000521667 LUZP2Q86TE4 346 aa16.31■□□□□ 0.2
TRAPPC9-210ENST00000521667 SERPINA12Q8IW75 414 aa16.31■□□□□ 0.2
TRAPPC9-210ENST00000521667 SMIM4Q8WVI0 70 aa16.31■□□□□ 0.2
TRAPPC9-210ENST00000521667 CDV3Q9UKY7 258 aaKnown RBP16.31■□□□□ 0.2
TRAPPC9-210ENST00000521667 GVINP1Q7Z2Y8 2422 aa16.31■□□□□ 0.2
TRAPPC9-210ENST00000521667 MEIOCA2RUB1 952 aa16.31■□□□□ 0.2
TRAPPC9-210ENST00000521667 ARGFXA6NJG6 315 aa16.31■□□□□ 0.2
TRAPPC9-210ENST00000521667 TM4SF5O14894 197 aa16.31■□□□□ 0.2
TRAPPC9-210ENST00000521667 LMX1BO60663 402 aa16.31■□□□□ 0.2
TRAPPC9-210ENST00000521667 SP1P08047 785 aa16.31■□□□□ 0.2
TRAPPC9-210ENST00000521667 CELA3AP09093 270 aa16.31■□□□□ 0.2
TRAPPC9-210ENST00000521667 NOVA1P51513 510 aaKnown RBP16.31■□□□□ 0.2
TRAPPC9-210ENST00000521667 GRB2P62993 217 aaKnown RBP16.31■□□□□ 0.2
TRAPPC9-210ENST00000521667 ENDOGQ14249 297 aaKnown RBP16.31■□□□□ 0.2
TRAPPC9-210ENST00000521667 SLC36A2Q495M3 483 aa16.31■□□□□ 0.2
TRAPPC9-210ENST00000521667 RNASE12Q5GAN4 147 aaKnown RBP16.31■□□□□ 0.2
TRAPPC9-210ENST00000521667 LINGO2Q7L985 606 aa16.31■□□□□ 0.2
TRAPPC9-210ENST00000521667 PRSS45Q7RTY3 260 aa16.31■□□□□ 0.2
TRAPPC9-210ENST00000521667 PLPP7Q8NBV4 271 aa16.31■□□□□ 0.2
TRAPPC9-210ENST00000521667 MDS2Q8NDY4 140 aa16.31■□□□□ 0.2
TRAPPC9-210ENST00000521667 ASCL3Q9NQ33 180 aa16.31■□□□□ 0.2
TRAPPC9-210ENST00000521667 ZNF275Q9NSD4 429 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC9-210ENST00000521667 NLKQ9UBE8 527 aa16.31■□□□□ 0.2
TRAPPC9-210ENST00000521667 KLF13Q9Y2Y9 288 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC9-210ENST00000521667 CACNG2Q9Y698 323 aa16.31■□□□□ 0.2
TRAPPC9-210ENST00000521667 CNOT1A5YKK6 2376 aaKnown RBP16.3■□□□□ 0.2
TRAPPC9-210ENST00000521667 MEGF11A6BM72 1044 aa16.3■□□□□ 0.2
TRAPPC9-210ENST00000521667 OR5H15A6NDH6 313 aa16.3■□□□□ 0.2
TRAPPC9-210ENST00000521667 FAM166BA8MTA8 275 aa16.3■□□□□ 0.2
TRAPPC9-210ENST00000521667 PROB1E7EW31 1015 aa16.3■□□□□ 0.2
TRAPPC9-210ENST00000521667 SYT7O43581 403 aa16.3■□□□□ 0.2
TRAPPC9-210ENST00000521667 TPTEP56180 551 aa16.3■□□□□ 0.2
TRAPPC9-210ENST00000521667 TMEM69Q5SWH9 247 aa16.3■□□□□ 0.2
TRAPPC9-210ENST00000521667 FAM166AQ6J272 317 aa16.3■□□□□ 0.2
TRAPPC9-210ENST00000521667 SLC25A25Q6KCM7 469 aa16.3■□□□□ 0.2
TRAPPC9-210ENST00000521667 KRT74Q7RTS7 529 aa16.3■□□□□ 0.2
TRAPPC9-210ENST00000521667 TOMM5Q8N4H5 51 aa16.3■□□□□ 0.2
TRAPPC9-210ENST00000521667 GJC3Q8NFK1 279 aa16.3■□□□□ 0.2
TRAPPC9-210ENST00000521667 OR51D1Q8NGF3 324 aa16.3■□□□□ 0.2
TRAPPC9-210ENST00000521667 ZNF845Q96IR2 970 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC9-210ENST00000521667 PTPRBP23467 1997 aa16.3■□□□□ 0.2
TRAPPC9-210ENST00000521667 SULT1B1O43704 296 aa16.29■□□□□ 0.2
TRAPPC9-210ENST00000521667 NME2P1O60361 137 aa16.29■□□□□ 0.2
TRAPPC9-210ENST00000521667 CYTIPO60759 359 aa16.29■□□□□ 0.2
TRAPPC9-210ENST00000521667 CD37P11049 281 aa16.29■□□□□ 0.2
TRAPPC9-210ENST00000521667 NME2P22392 152 aa16.29■□□□□ 0.2
TRAPPC9-210ENST00000521667 NTF4P34130 210 aa16.29■□□□□ 0.2
TRAPPC9-210ENST00000521667 MAGEA5P43359 124 aa16.29■□□□□ 0.2
TRAPPC9-210ENST00000521667 CX3CR1P49238 355 aa16.29■□□□□ 0.2
TRAPPC9-210ENST00000521667 SRP9P49458 86 aaKnown RBP16.29■□□□□ 0.2
TRAPPC9-210ENST00000521667 ZNF121P58317 390 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC9-210ENST00000521667 PLGLB1Q02325 96 aa16.29■□□□□ 0.2
TRAPPC9-210ENST00000521667 RSBN1Q5VWQ0 802 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC9-210ENST00000521667 AAED1Q7RTV5 226 aa16.29■□□□□ 0.2
TRAPPC9-210ENST00000521667 GALNTL5Q7Z4T8 443 aa16.29■□□□□ 0.2
TRAPPC9-210ENST00000521667 GLCCI1Q86VQ1 547 aa16.29■□□□□ 0.2
TRAPPC9-210ENST00000521667 TMEM251Q8N6I4 163 aa16.29■□□□□ 0.2
TRAPPC9-210ENST00000521667 OR51A2Q8NGJ7 313 aa16.29■□□□□ 0.2
TRAPPC9-210ENST00000521667 A0A1B0GVI7 797 aa16.29■□□□□ 0.2
TRAPPC9-210ENST00000521667 A6NL46 340 aa16.29■□□□□ 0.2
TRAPPC9-210ENST00000521667 CDK2P24941 298 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms