RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 ANKHQ9HCJ1 492 aa2.88□□□□□ -1.95
SQLE-204ENST00000520493 KCNJ16Q9NPI9 418 aa2.88□□□□□ -1.95
SQLE-204ENST00000520493 GGA2Q9UJY4 613 aa2.88□□□□□ -1.95
SQLE-204ENST00000520493 A0A0G2JN53 185 aa2.87□□□□□ -1.95
SQLE-204ENST00000520493 UTS2O95399 124 aa2.87□□□□□ -1.95
SQLE-204ENST00000520493 CATP04040 527 aaKnown RBP2.87□□□□□ -1.95
SQLE-204ENST00000520493 CHTF8P0CG12 524 aa2.87□□□□□ -1.95
SQLE-204ENST00000520493 SMIM10L1P0DMW3 83 aa2.87□□□□□ -1.95
SQLE-204ENST00000520493 TDGF1P13385 188 aa2.87□□□□□ -1.95
SQLE-204ENST00000520493 PSMC3P17980 439 aa2.87□□□□□ -1.95
SQLE-204ENST00000520493 ATF6P18850 670 aa2.87□□□□□ -1.95
SQLE-204ENST00000520493 KLK2P20151 261 aa2.87□□□□□ -1.95
SQLE-204ENST00000520493 IL12BP29460 328 aa2.87□□□□□ -1.95
SQLE-204ENST00000520493 TDGF1P3P51864 188 aa2.87□□□□□ -1.95
SQLE-204ENST00000520493 APOC4P55056 127 aa2.87□□□□□ -1.95
SQLE-204ENST00000520493 FGF8P55075 233 aaPredicted RBP2.87□□□□□ -1.95
SQLE-204ENST00000520493 TAS2R60P59551 318 aa2.87□□□□□ -1.95
SQLE-204ENST00000520493 RPS21P63220 83 aaKnown RBP2.87□□□□□ -1.95
SQLE-204ENST00000520493 SLC35B1P78383 322 aa2.87□□□□□ -1.95
SQLE-204ENST00000520493 TRDNQ13061 729 aa2.87□□□□□ -1.95
SQLE-204ENST00000520493 STX3Q13277 289 aa2.87□□□□□ -1.95
SQLE-204ENST00000520493 SLC39A6Q13433 755 aa2.87□□□□□ -1.95
SQLE-204ENST00000520493 QPRTQ15274 297 aa2.87□□□□□ -1.95
SQLE-204ENST00000520493 COA6Q5JTJ3 125 aaKnown RBP2.87□□□□□ -1.95
SQLE-204ENST00000520493 C6orf89Q6UWU4 347 aa2.87□□□□□ -1.95
SQLE-204ENST00000520493 THOC6Q86W42 341 aaKnown RBP2.87□□□□□ -1.95
SQLE-204ENST00000520493 CD302Q8IX05 232 aa2.87□□□□□ -1.95
SQLE-204ENST00000520493 PNKDQ8N490 385 aa2.87□□□□□ -1.95
SQLE-204ENST00000520493 NEIL3Q8TAT5 605 aa2.87□□□□□ -1.95
SQLE-204ENST00000520493 TMEM239Q8WW34 195 aa2.87□□□□□ -1.95
SQLE-204ENST00000520493 GEMIN6Q8WXD5 167 aaKnown RBP2.87□□□□□ -1.95
SQLE-204ENST00000520493 NDRG1Q92597 394 aaKnown RBP2.87□□□□□ -1.95
SQLE-204ENST00000520493 RCN3Q96D15 328 aa2.87□□□□□ -1.95
SQLE-204ENST00000520493 SEH1LQ96EE3 360 aa2.87□□□□□ -1.95
SQLE-204ENST00000520493 C16orf74Q96GX8 76 aa2.87□□□□□ -1.95
SQLE-204ENST00000520493 CENPNQ96H22 339 aaPredicted RBP2.87□□□□□ -1.95
SQLE-204ENST00000520493 SMIM10Q96HG1 83 aa2.87□□□□□ -1.95
SQLE-204ENST00000520493 COL21A1Q96P44 957 aa2.87□□□□□ -1.95
SQLE-204ENST00000520493 ZNF317Q96PQ6 595 aaPredicted RBP2.87□□□□□ -1.95
SQLE-204ENST00000520493 MICU1Q9BPX6 476 aa2.87□□□□□ -1.95
SQLE-204ENST00000520493 UBE2ZQ9H832 354 aaPredicted RBP2.87□□□□□ -1.95
SQLE-204ENST00000520493 TMEM9BQ9NQ34 198 aa2.87□□□□□ -1.95
SQLE-204ENST00000520493 CCL28Q9NRJ3 127 aa2.87□□□□□ -1.95
SQLE-204ENST00000520493 ABCB10Q9NRK6 738 aa2.87□□□□□ -1.95
SQLE-204ENST00000520493 STX18Q9P2W9 335 aaKnown RBP2.87□□□□□ -1.95
SQLE-204ENST00000520493 PRO0461Q9UI25 63 aa2.87□□□□□ -1.95
SQLE-204ENST00000520493 ST3GAL6Q9Y274 331 aa2.87□□□□□ -1.95
SQLE-204ENST00000520493 C15orf41Q9Y2V0 281 aa2.87□□□□□ -1.95
SQLE-204ENST00000520493 HYOU1Q9Y4L1 999 aa2.87□□□□□ -1.95
SQLE-204ENST00000520493 V9GYY9 64 aa2.87□□□□□ -1.95
SQLE-204ENST00000520493 DENND4AQ7Z401 1863 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 NCBP2LA6PVI3 153 aaKnown RBP2.86□□□□□ -1.95
SQLE-204ENST00000520493 RNASEK-C17orf49H0YIS7 233 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 PEX7O00628 323 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 NME4O00746 187 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 XKRYO14609 159 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 GATCO43716 136 aaKnown RBP2.86□□□□□ -1.95
SQLE-204ENST00000520493 FAM189A1O60320 539 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 MMP23AO75900 390 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 FADS2O95864 444 aaKnown RBP2.86□□□□□ -1.95
SQLE-204ENST00000520493 RPN2P04844 631 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 RHOCP08134 193 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 NQO2P16083 231 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 CSNK2A2P19784 350 aaPredicted RBP2.86□□□□□ -1.95
SQLE-204ENST00000520493 IL32P24001 234 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 LOXP28300 417 aaPredicted RBP2.86□□□□□ -1.95
SQLE-204ENST00000520493 ARR3P36575 388 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 CSNK1DP48730 415 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 DNASE1L1P49184 302 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 SERPINB8P50452 374 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 FABP6P51161 128 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 LYZP61626 148 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 TIMM10P62072 90 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 PRPSAP1Q14558 356 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 NSDHLQ15738 373 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 CCDC14Q49A88 953 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 LRRC10Q5BKY1 277 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 LCN12Q6JVE5 192 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 APOBEC3HQ6NTF7 200 aaKnown RBP2.86□□□□□ -1.95
SQLE-204ENST00000520493 TEX43Q6ZNM6 134 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 LRRC8AQ8IWT6 810 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 CEND1Q8N111 149 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 OR4D6Q8NGJ1 314 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 OR52E2Q8NGJ4 325 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 OR6Q1Q8NGQ2 317 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 OR6K2Q8NGY2 324 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 OR10J6PQ8NGY7 276 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 FANK1Q8TC84 345 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 CCDC12Q8WUD4 166 aaPredicted RBP2.86□□□□□ -1.95
SQLE-204ENST00000520493 APH1BQ8WW43 257 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 CDKL2Q92772 493 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 CPB2Q96IY4 423 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 SLC35E1Q96K37 410 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 CYTH2Q99418 400 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 NRBP2Q9NSY0 501 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 POFUT2Q9Y2G5 429 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 ZNF646O15015 1829 aaPredicted RBP2.86□□□□□ -1.95
SQLE-204ENST00000520493 CEMIPQ8WUJ3 1361 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 PLEKHG1Q9ULL1 1385 aa2.86□□□□□ -1.95
SQLE-204ENST00000520493 IGKV6D-21A0A0A0MT36 114 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms