RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 ETV6P41212 452 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 CASP3P42574 277 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 TGM4P49221 684 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 DHPSP49366 369 aaPredicted RBP4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 PSMD7P51665 324 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 RPS4XP62701 263 aaKnown RBP4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 PNRC1Q12796 327 aaPredicted RBP4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 CBX3Q13185 183 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 TMED1Q13445 227 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 TPBGQ13641 420 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 C1DQ13901 141 aaKnown RBP4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 CRMP1Q14194 572 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 OXA1LQ15070 435 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 ZSWIM7Q19AV6 140 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 KLHL22Q53GT1 634 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 RPL13AP3Q6NVV1 102 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 FAM122CQ6P4D5 195 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 ARHGAP11AQ6P4F7 1023 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 CD200R1LQ6Q8B3 271 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 WDR74Q6RFH5 385 aaPredicted RBP4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 ZNF322Q6U7Q0 402 aaPredicted RBP4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 B3GLCTQ6Y288 498 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 GDPGP1Q6ZNW5 385 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 COLCA1Q6ZS62 124 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 LANCL3Q6ZV70 420 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 FJX1Q86VR8 437 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 PRIMA1Q86XR5 153 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 PRSS58Q8IYP2 241 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 PRR22Q8IZ63 422 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 CADM2Q8N3J6 435 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 GBGT1Q8N5D6 347 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 RFLNBQ8N5W9 214 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 ARIH2OSQ8N7S6 290 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 CYB561A3Q8NBI2 242 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 SLC37A3Q8NCC5 494 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 OR9Q1Q8NGQ5 310 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 OR52N1Q8NH53 320 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 OR51A7Q8NH64 312 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 OR4C6Q8NH72 309 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 ZPLD1Q8TCW7 415 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 SAP25Q8TEE9 199 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 SPRYD4Q8WW59 207 aaPredicted RBP4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 UFD1Q92890 307 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 DAZLQ92904 295 aaKnown RBP4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 SGTBQ96EQ0 304 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 RBM18Q96H35 190 aaKnown RBP4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 TNFRSF13CQ96RJ3 184 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 GAL3ST4Q96RP7 486 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 MROQ9BYG7 248 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 OR8D2Q9GZM6 311 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 C6orf62Q9GZU0 229 aaPredicted RBP4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 LRRN3Q9H3W5 708 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 EXOSC4Q9NPD3 245 aaKnown RBP4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 EXOSC3Q9NQT5 275 aaKnown RBP4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 TXNL4BQ9NX01 149 aaKnown RBP4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 QPCTLQ9NXS2 382 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 CHRNA9Q9UGM1 479 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 FBXL4Q9UKA2 621 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 ICAM5Q9UMF0 924 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 CFL2Q9Y281 166 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 SLC35A3Q9Y2D2 325 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 THADAQ6YHU6 1953 aa4.23□□□□□ -1.73
CTNNA1-212ENST00000518919 COL5A1P20908 1838 aaPredicted RBP4.23□□□□□ -1.73
CTNNA1-212ENST00000518919 TNRC6BQ9UPQ9 1833 aaKnown RBP4.23□□□□□ -1.73
CTNNA1-212ENST00000518919 IGLV3-12A0A075B6K2 115 aa4.23□□□□□ -1.73
CTNNA1-212ENST00000518919 IGHV3-20A0A0C4DH32 117 aa4.23□□□□□ -1.73
CTNNA1-212ENST00000518919 SNTNA6NMZ2 147 aa4.23□□□□□ -1.73
CTNNA1-212ENST00000518919 RIIAD1A6NNX1 92 aa4.23□□□□□ -1.73
CTNNA1-212ENST00000518919 C12orf71A8MTZ7 269 aa4.23□□□□□ -1.73
CTNNA1-212ENST00000518919 IMPA2O14732 288 aa4.23□□□□□ -1.73
CTNNA1-212ENST00000518919 POLR1CO15160 346 aaPredicted RBP4.23□□□□□ -1.73
CTNNA1-212ENST00000518919 TSPAN2O60636 221 aa4.23□□□□□ -1.73
CTNNA1-212ENST00000518919 UPK1BO75841 260 aa4.23□□□□□ -1.73
CTNNA1-212ENST00000518919 FSHBP01225 129 aa4.23□□□□□ -1.73
CTNNA1-212ENST00000518919 CSN3P07498 182 aa4.23□□□□□ -1.73
CTNNA1-212ENST00000518919 MRPL3P09001 348 aaKnown RBP4.23□□□□□ -1.73
CTNNA1-212ENST00000518919 TSPAN19P0C672 248 aa4.23□□□□□ -1.73
CTNNA1-212ENST00000518919 ANKRD34CP0C6C1 535 aa4.23□□□□□ -1.73
CTNNA1-212ENST00000518919 SPP1P10451 314 aa4.23□□□□□ -1.73
CTNNA1-212ENST00000518919 HOXD3P31249 432 aaPredicted RBP4.23□□□□□ -1.73
CTNNA1-212ENST00000518919 RORAP35398 523 aa4.23□□□□□ -1.73
CTNNA1-212ENST00000518919 PPICP45877 212 aa4.23□□□□□ -1.73
CTNNA1-212ENST00000518919 ARRB1P49407 418 aaPredicted RBP4.23□□□□□ -1.73
CTNNA1-212ENST00000518919 CCL7P80098 99 aa4.23□□□□□ -1.73
CTNNA1-212ENST00000518919 DLK1P80370 383 aa4.23□□□□□ -1.73
CTNNA1-212ENST00000518919 FABP5Q01469 135 aa4.23□□□□□ -1.73
CTNNA1-212ENST00000518919 ZNF85Q03923 595 aa4.23□□□□□ -1.73
CTNNA1-212ENST00000518919 ZNF117Q03924 483 aa4.23□□□□□ -1.73
CTNNA1-212ENST00000518919 PLCXD2Q0VAA5 305 aa4.23□□□□□ -1.73
CTNNA1-212ENST00000518919 BIKQ13323 160 aa4.23□□□□□ -1.73
CTNNA1-212ENST00000518919 TNK1Q13470 666 aa4.23□□□□□ -1.73
CTNNA1-212ENST00000518919 GGTLC2Q14390 218 aa4.23□□□□□ -1.73
CTNNA1-212ENST00000518919 INSL4Q14641 139 aa4.23□□□□□ -1.73
CTNNA1-212ENST00000518919 RGS21Q2M5E4 152 aa4.23□□□□□ -1.73
CTNNA1-212ENST00000518919 VWA2Q5GFL6 755 aa4.23□□□□□ -1.73
CTNNA1-212ENST00000518919 C22orf42Q6IC83 251 aa4.23□□□□□ -1.73
CTNNA1-212ENST00000518919 RHBDD2Q6NTF9 364 aa4.23□□□□□ -1.73
CTNNA1-212ENST00000518919 ULK3Q6PHR2 472 aa4.23□□□□□ -1.73
CTNNA1-212ENST00000518919 CBLN3Q6UW01 205 aa4.23□□□□□ -1.73
CTNNA1-212ENST00000518919 ZNF704Q6ZNC4 412 aaPredicted RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms