RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 TRIM62Q9BVG3 475 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 TSSK1BQ9BXA7 367 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 NAT10Q9H0A0 1025 aaKnown RBP3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 OPN3Q9H1Y3 402 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 SLC17A5Q9NRA2 495 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 IKZF2Q9UKS7 526 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 COPS3Q9UNS2 423 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 RNF24Q9Y225 148 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 KLF13Q9Y2Y9 288 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 IFT52Q9Y366 437 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 PPIAL4AQ9Y536 164 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 TNFRSF18Q9Y5U5 241 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 SNX10Q9Y5X0 201 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 NINQ8N4C6 2090 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 LYSTQ99698 3801 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 DMBT1Q9UGM3 2413 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 A0A1W2PP18 115 aa3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 TSPAN11A1L157 253 aa3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 LRP5LA4QPB2 252 aa3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 H0YC42 278 aa3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 NBR2O15453 112 aa3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 AP2A1O95782 977 aa3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 CD160O95971 181 aa3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 CD55P08174 381 aa3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 HCKP08631 526 aa3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 WNT2P09544 360 aa3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 ZNF10P21506 573 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 CRYGSP22914 178 aa3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 TEAD1P28347 426 aa3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 ATP5OP48047 213 aa3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 PRRX1P54821 245 aa3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 SEC61GP60059 68 aa3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 RPL8P62917 257 aaKnown RBP3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 ORC2Q13416 577 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 IL18R1Q13478 541 aa3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 LAGE3Q14657 143 aa3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 NRF1Q16656 503 aa3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 TMEM44Q2T9K0 475 aa3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 SEL1L2Q5TEA6 688 aa3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 DNM1P46Q6ZS02 220 aa3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 CENPQQ7L2Z9 268 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 KLHDC8BQ8IXV7 354 aa3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 MFSD9Q8NBP5 474 aa3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 OR4C5Q8NGB2 326 aa3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 RAB3IL1Q8TBN0 382 aa3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 LINC00479Q96M42 142 aa3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 ZNF641Q96N77 438 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 TSNARE1Q96NA8 513 aa3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 WFIKKN1Q96NZ8 548 aa3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 CITED1Q99966 193 aa3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 RBM4BQ9BQ04 359 aaKnown RBP3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 SUCNR1Q9BXA5 334 aa3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 HCAR1Q9BXC0 346 aa3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 GPR61Q9BZJ8 451 aa3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 ROPN1BQ9BZX4 212 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 NHEJ1Q9H9Q4 299 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 CYP3A43Q9HB55 503 aa3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 TIGARQ9NQ88 270 aa3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 IMP3Q9NV31 184 aaKnown RBP3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 BFARQ9NZS9 450 aa3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 CTSZQ9UBR2 303 aa3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 PRPF19Q9UMS4 504 aaKnown RBP3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 POLDIP2Q9Y2S7 368 aa3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 EXPH5Q8NEV8 1989 aa3.71□□□□□ -1.82
HMGB1P23-201ENST00000518743 WNK2Q9Y3S1 2297 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 MEX3AA1L020 520 aaKnown RBP3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 ZNF487B1APH4 448 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 M0QYV0 167 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 SOCS3O14543 225 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 RS1O15537 224 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 CT45A10P0DMU9 189 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 CD80P33681 288 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 OPRM1P35372 400 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 CRYBB2P43320 205 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 OR1D4P47884 311 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 POU3F4P49335 361 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 CYB561P49447 251 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 ARHGDIBP52566 201 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 ZNF136P52737 540 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 EMP2P54851 167 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 BCL2L1Q07817 233 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 BST1Q10588 318 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 ASPHQ12797 758 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 XRCC4Q13426 336 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 EIF4EBP2Q13542 120 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 LTB4RQ15722 352 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 SLC25A52Q3SY17 297 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 ZNF506Q5JVG8 444 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 SPANXN2Q5MJ10 180 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 C9orf66Q5T8R8 295 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 RAET1LQ5VY80 246 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 ZNF613Q6PF04 617 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 ZNF525Q8N782 197 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 ZNF491Q8N8L2 437 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 WDSUB1Q8N9V3 476 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 C9orf106Q8NAJ2 232 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 OR4E2Q8NGC2 313 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 KCNG3Q8TAE7 436 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 MUC7Q8TAX7 377 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 TRUB1Q8WWH5 349 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms